BAC Information

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BAC

Clone NameB6Ng01-078O22
Chromosome1 (Build37)
Map Location 95,979,689 - 95,980,708
singlet/doubletsinglet
Overlap genenone
Upstream geneKif1a, Agxt, 2310007B03Rik, E030010N08Rik, Sned1, Mterfd2, LOC665966, Pask, Ppp1r7, Tmem16g, Hdlbp, Sept2, Farp2, Stk25, Bok, Thap4, Atg4b, Dtymk, Ing5, D2hgdh, Gal3st2, LOC100041596, EG666009, EG619597, Neu4, Pdcd1
Downstream geneLOC666012, LOC666025, LOC100040685
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078O22.bB6Ng01-078O22.g
ACCDH894495DH894496
length1981,023
definitionDH894495|Mus musculus domesticus DNA, BAC clone: B6Ng01-078O22, 5' end.DH894496|Mus musculus domesticus DNA, BAC clone: B6Ng01-078O22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tgggaatttttcaaagggtatataaatactagggcctcataagctggtcg
gtggttgttgatcatttgggggttctttgtggtttgttagtagtggtgtt
caaagaagaaacaagaagttagattcagagatctttctttgctctctatt
ctcttttctcccctatgtattgatcagggtgaggggagggtggactga
gaattcccctaatgtacttcaaattgggcctgtgagcttacctgggcatc
tccatcttggtaaatagtagaccccagcatgcgggacttctgaagaataa
aacattctttgcttttacatatggtttgagtccaggggtatcattcttca
gtgattcatgaaccctgatttatgtagaagatgtgtatgggaaaaggtaa
atcagtaacagatgtaagtaataagaatagacacgatccatgcatgttag
accagtatgctctatttggagaatagtatttctactgacattctgactaa
taaacccatcgcctttagtttttagtgaatatacatgattaaatatgtct
aggtgatttaaagggcaaatctaaatcaaatcctcttagagttgaaatga
aatgcaatgtgcaaacctaatctagtcaaaaccaacatgacaccaatttg
aagatgttccctttggtcaaaattagaatcaaaacaataatgatgcacac
aggttttaatgaattgaatttctcatcatctacaaaatgaagaatgacag
agggagagaaaataagaaaggggggtaggggtggcagtaaagctgccttt
ggcaacctagtaactatttgtaaacctactctaccaaggctgccagggaa
atgcttttccccacaagtcttcctggtagtagtttaagttgcaaggatga
ttatttgattaaaatctttttagcattttatttactcataattttatgtg
gacactggggctttcctgcatgtatgtctgtgtaccatgtttatgaagtg
cccacagaggccagaagacattagacccttgaaactgggaattatagaca
gttgtgaagccatcatgtggatactgggaatcaaacctgaatcctctgta
aggcaagtgattgttactctccttccaatcctccactgcaaattgcccag
tcggatcccaagctccgtatcagacaactgcaggacttgtcctccccttc
tcagccttactgctttgaagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_95979689_95980708
seq2: B6Ng01-078O22.g_70_1092 (reverse)

seq1  CATC-TCAAGGCAGTAAGGGCTGAGA--GGGAGGAC-AGTCCCCTGCAAG  46
      |||| |||| ||||||| ||||||||  |||||||| |||  ||||| ||
seq2  CATCTTCAAAGCAGTAA-GGCTGAGAAGGGGAGGACAAGT--CCTGC-AG  46

seq1  TTGTCTGATACGGAGCTTGGGATCCGACTGGGCAATTTGCAGTGGAGGAT  96
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGATACGGAGCTTGGGATCCGACTGGGCAATTTGCAGTGGAGGAT  96

seq1  TGGAAGGAGAGTAACAATCACTTGCCTTACAGAGGATTCAGGTTTGATTC  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGAGAGTAACAATCACTTGCCTTACAGAGGATTCAGGTTTGATTC  146

seq1  CCAGTATCCACATGATGGC-TCACAACTGTCTATAATT-CCAGTTTCAGG  194
      ||||||||||||||||||| |||||||||||||||||| ||||||||| |
seq2  CCAGTATCCACATGATGGCTTCACAACTGTCTATAATTCCCAGTTTCAAG  196

seq1  GGTCTAATGTCTTCTGGCCTCTGTGGGCACTTCATGAACATGGTACACAG  244
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGTCTAATGTCTTCTGGCCTCTGTGGGCACTTCATAAACATGGTACACAG  246

seq1  ACATACATGCAGGAAAGCCCCAGTGTCCACATAAAATTATGAGTAAATAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATGCAGGAAAGCCCCAGTGTCCACATAAAATTATGAGTAAATAA  296

seq1  AATGCTAAAAAGATTTTAATCAAATAATCATCCTTGCAACTTAAACTACT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAAAAAGATTTTAATCAAATAATCATCCTTGCAACTTAAACTACT  346

seq1  ACCAGGAAGACTTGTGGGG-AAAGCATTTCCCTGGCAGCCTTGGTAGAGT  393
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACCAGGAAGACTTGTGGGGAAAAGCATTTCCCTGGCAGCCTTGGTAGAGT  396

seq1  AGGTTTACAAATAGTTACTAGGTTGCCAAAGGCAGCTTTACTGCCACCCC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTACAAATAGTTACTAGGTTGCCAAAGGCAGCTTTACTGCCACCCC  446

seq1  TACCCCCCTTTCTTATTTTCTCTCCCTCTGTCATTCTTCATTTTGTAGAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCCTTTCTTATTTTCTCTCCCTCTGTCATTCTTCATTTTGTAGAT  496

seq1  GATGAGAAATTCAATTCATTAAAACCTGTGTGCATCATTATTGTTTTGAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAAATTCAATTCATTAAAACCTGTGTGCATCATTATTGTTTTGAT  546

seq1  TCTAATTTTGACCAAAGGGAACATCTTCAAATTGGTGTCATGTTGGTTTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTTGACCAAAGGGAACATCTTCAAATTGGTGTCATGTTGGTTTT  596

seq1  GACTAGATTAGGTTTGCACATTGCATTTCATTTCAACTCTAAGAGGATTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGATTAGGTTTGCACATTGCATTTCATTTCAACTCTAAGAGGATTT  646

seq1  GATTTAGATTTGCCCTTTAAATCACCTAGACATATTTAATCATGTATATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGATTTGCCCTTTAAATCACCTAGACATATTTAATCATGTATATT  696

seq1  CACTAAAAACTAAAGGCGATGGGTTTATTAGTCAGAATGTCAGTAGAAAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAAACTAAAGGCGATGGGTTTATTAGTCAGAATGTCAGTAGAAAT  746

seq1  ACTATTCTCCAAATAGAGCATACTGGTCTAACATGCATGGATCGTGTCTA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTCTCCAAATAGAGCATACTGGTCTAACATGCATGGATCGTGTCTA  796

seq1  TTCTTATTACTTACATCTGTTACTGATTTACCTTTTCCCATACACATCTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTACTTACATCTGTTACTGATTTACCTTTTCCCATACACATCTT  846

seq1  CTACATAAATCAGGGTTCATGAATCACTGAAGAATGATACCCCTGGACTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAAATCAGGGTTCATGAATCACTGAAGAATGATACCCCTGGACTC  896

seq1  AAACCATATGTAAAAGCAAAGAATGTTTTATTCTTCAGAAGTCCCGCATG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATATGTAAAAGCAAAGAATGTTTTATTCTTCAGAAGTCCCGCATG  946

seq1  CTGGGGTCTACTATTTACCAAGATGGAGATGCCCAGGTAAGCTCACAGGC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTCTACTATTTACCAAGATGGAGATGCCCAGGTAAGCTCACAGGC  996

seq1  CCAATTTGAAGTACATTAGGGGAATTC  1020
      |||||||||||||||||||||||||||
seq2  CCAATTTGAAGTACATTAGGGGAATTC  1023