BAC Information

Click to search

BAC

Clone NameB6Ng01-079G05
Chromosome1 (Build37)
Map Location 102,106,714 - 102,107,394
singlet/doubletsinglet
Overlap geneC230078M14Rik
Upstream geneLOC633295
Downstream geneEG666200
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079G05.bB6Ng01-079G05.g
ACCDH894810DH894811
length6741,028
definitionDH894810|Mus musculus domesticus DNA, BAC clone: B6Ng01-079G05, 5' end.DH894811|Mus musculus domesticus DNA, BAC clone: B6Ng01-079G05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatggcctctcctggagcccatatgaagcagcacttaactccc
tgtagcaattagcatcaagggatccaacaccctattctagcttcctccac
aagaaactacactcatttatgcatacccatatatggacacacacacacat
aattaaagataaaaacaaattattaaataagtagcaaatactaaagacaa
aatgggacagttaaagaggattggagtcagtcagtggaaacaagttataa
ttgtgtgatgtaaaacgtagactagttgggactcaacaaaaatttaccta
tgtctgactcccaaacacaggaattaaagacatgggagtactctcagatc
tgccttatttttcaaggaagagtatctcactgaaccctagtagctttctc
agttgcccagcaaacactagaggtctttttgttcccatgtttctagctgt
aagatataggccagggatgttatgtccagttttttatattgagtccagga
tattggggcatatgaggctatatatatatatatatatatatatatatata
tatatatatatatatatatatgttttgttgttgctatatgagcacaggtg
tttaggctttaatgacattttccagttgtcaaagaacttgattaaccctt
ttttcacaatccaatggcttcttt
gaattctttgtttagctctgtacctcatttttaaatagggttatttggtt
ctctggtgtctctcttctttcattctttgtatatattgaatatctgtctt
ctattggatgtaggattggtaatgatcttttcccaatctatacattgcca
ttttgtcctgatgacagtatcctttgccttacagaagctttgcaatttta
tgagatcccatttgtctatagtggatcttagagactgggccattgatgtt
gtattcaggaaattttcccccatgcctatgttttcgagtctctttcctag
tttctcttctaagagattaagtatatctcgttttatttggaggtctttta
tcctcttggacttgagctttgtatacagagaaaagaatgtgtcaatttgc
attcttctacctgctgactgaatatcaaccagcatcatttgttgaatgtg
ctctctttttttccactggatggttagatcctttgtcatagaacaagtga
ctataggtctgtgagttcatttctgggtcttcagttctattccatttatc
tacatgcctgtctctatatcaataacatgtggtttttgtcactattgctc
tgtagtagagcttgagttcgggacggtgattccctgagaaattttcttat
ctttgagaattgttttcactatcctgtattttttgttgttccaaatgaat
ttgagattttctttttctatcattgtgaagaattaagtttgaattttgat
aaggatatattgaatctgtagattgctttgtggtaaaaaaataatcattt
ttactatgttaatactgctgatccaggagtatgggagatctttccatctt
ctgaggacttcttcaatttctttcttaagagagttgaacttctttttata
cagatctttcactcactttgtaaactcacagcagatctttatatttatgg
tggactatttgaaggtgtcattttcttatttcttgcacagaatgtttatt
cttttgagtagaggaagactactgattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102106714_102107394
seq2: B6Ng01-079G05.b_49_722

seq1  GAATTCATATGGCCTCTCCTGGAGCCCATATGAAGCAGCACTTAACTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGGCCTCTCCTGGAGCCCATATGAAGCAGCACTTAACTCCC  50

seq1  TGTAGCAATTAGCATCAAGGGATCCAACACCCTATTCTAGCTTCCTCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCAATTAGCATCAAGGGATCCAACACCCTATTCTAGCTTCCTCCAC  100

seq1  AAGAAACTACACTCATTTATGCATACCCATATATGGACACACACACACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACTACACTCATTTATGCATACCCATATATGGACACACACACACAT  150

seq1  AATTAAAGATAAAAACAAATTATTAAATAAGTAGCAAATACTAAAGACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGATAAAAACAAATTATTAAATAAGTAGCAAATACTAAAGACAA  200

seq1  AATGGGACAGTTAAAGAGGATTGGAGTCAGTCAGTGGAAACAAGTTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGACAGTTAAAGAGGATTGGAGTCAGTCAGTGGAAACAAGTTATAA  250

seq1  TTGTGTGATGTAAAACGTAGACTAGTTGGGACTCAACAAAAATTTACCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGATGTAAAACGTAGACTAGTTGGGACTCAACAAAAATTTACCTA  300

seq1  TGTCTGACTCCCAAACACAGGAATTAAAGACATGGGAGTACTCTCAGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGACTCCCAAACACAGGAATTAAAGACATGGGAGTACTCTCAGATC  350

seq1  TGCCTTATTTTTCAAGGAAGAGTATCTCACTGAACCCTAGTAGCTTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTATTTTTCAAGGAAGAGTATCTCACTGAACCCTAGTAGCTTTCTC  400

seq1  AGTTGCCCAGCAAACACTAGAGGTCTTTTTGTTCCCATGTTTCTAGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCCCAGCAAACACTAGAGGTCTTTTTGTTCCCATGTTTCTAGCTGT  450

seq1  AAGATATAGGCCAGGGATGTTATGTCCAGTTTTTTATATTGAGTCCAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATAGGCCAGGGATGTTATGTCCAGTTTTTTATATTGAGTCCAGGA  500

seq1  TATTGGGGCATATGAGGCTATATATATATATATATATATATATATATATA  550
      ||||||||||||||||||        ||||||||||||||||||||||||
seq2  TATTGGGGCATATGAGGC--------TATATATATATATATATATATATA  542

seq1  TATATATATATATATATATATATATATATGTTTTGTTGTTGCTTTATGAG  600
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATATATATATATATATATATATATATATGTTTTGTTGTTGCTATATGAG  592

seq1  CACAGGTGTTTAGGCATTAATGACA-TTTCCAGTTGTCACAGAACTTGAT  649
      ||||||||||||||| ||||||||| ||||||||||||| ||||||||||
seq2  CACAGGTGTTTAGGCTTTAATGACATTTTCCAGTTGTCAAAGAACTTGAT  642

seq1  TAACCCATTTTTCACAATCCAATGGCTTCTTT  681
      |||||| |||||||||||||||||||||||||
seq2  TAACCCTTTTTTCACAATCCAATGGCTTCTTT  674