MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-080A08
Chromosome	1 (Build37)
Map Location	151,816,291 - 151,817,294
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC435647, LOC100042813, Pla2g4a
Downstream gene	Ptgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534, EG545370
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC435647 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435647
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100042813 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042813
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Pla2g4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18783 MGI:1195256
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptgs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19225 MGI:97798
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC676712 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100043257 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 416 ESTs, 15 Proteins

name	LOC100043261 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 74 ESTs, 2 Proteins pseudo : _no_value

name	Pdc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20028 MGI:98090
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC003331 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226499 MGI:2385108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Tpr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108989 MGI:1922066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625534 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625534 MGI:3643639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs, 2 Proteins

name	EG545370 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545370 MGI:3646881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pla2g4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891677 GeneID:18783 MGI:1195256
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group IVA (cytosolic, calcium-dependent) transcript_id : NM_008869.3

name	Ptgs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130137 GeneID:19225 MGI:97798
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prostaglandin-endoperoxide synthase 2 transcript_id : NM_011198.3

name	LOC100043257 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234329 GeneID:100043257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 416 ESTs, 15 Proteins product : similar to RNA binding motif protein 3 transcript_id : XM_001480197.1

name	Pdc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13277351 GeneID:20028 MGI:98090
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosducin transcript_id : NM_024458.1

name	BC003331 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116805316 GeneID:226499 MGI:2385108
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC003331 transcript_id : NM_001077237.1

name	BC003331 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116805314 GeneID:226499 MGI:2385108
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC003331 transcript_id : NM_145511.2

name	Tpr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27477056 GeneID:108989 MGI:1922066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocated promoter region transcript_id : NM_133780.2

name	EG625534 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363984 GeneID:625534 MGI:3643639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 2 Proteins product : predicted gene, EG625534, transcript variant 2 transcript_id : XM_890112.2

name	EG625534 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234332 GeneID:625534 MGI:3643639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG625534, transcript variant 1 transcript_id : XM_001480213.1

name	EG545370 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371430 GeneID:545370 MGI:3646881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG545370 transcript_id : NM_001024720.2

name	Pla2g4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679369 CCDS:CCDS15352.1 GeneID:18783 MGI:1195256
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004622 - lysophospholipase activity [Evidence IEA]; GO:0004623 - phospholipase A2 activity [Evidence IEA]; GO:0004620 - phospholipase activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0009395 - phospholipid catabolism [Evidence IEA] codon_start : 1 note : phospholipase A2, group 4; cPLA2-alpha; Type IV PLA2; cytosolic PLA2; cytosolic phospholipase A2 product : cytosolic phospholipase A2, group IVA protein_id : NP_032895.1

name	Ptgs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981525 CCDS:CCDS15353.1 GeneID:19225 MGI:97798
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]; GO:0004666 - prostaglandin-endoperoxide synthase activity [Evidence IEA] GO_process : GO:0042640 - anagen [Evidence IMP]; GO:0008217 - blood pressure regulation [Evidence IMP]; GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0030216 - keratinocyte differentiation [Evidence NAS]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0001516 - prostaglandin biosynthesis [Evidence IEA] codon_start : 1 note : cyclooxygenase 2; prostaglandin G/H synthase; cyclooxygenase-2 product : prostaglandin-endoperoxide synthase 2 protein_id : NP_035328.2

name	LOC100043257 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234330 GeneID:100043257
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480247.1

name	Pdc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13277352 CCDS:CCDS15354.1 GeneID:20028 MGI:98090
definition	GO_component : GO:0005829 - cytosol [Evidence TAS] GO_function : GO:0005095 - GTPase inhibitor activity [Evidence ISS] GO_process : GO:0008277 - regulation of G-protein coupled receptor protein signaling pathway [Evidence ISS]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0009586 - rhodopsin mediated phototransduction [Evidence ISS]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 note : rod photoreceptor 1 product : phosducin protein_id : NP_077778.1

name	BC003331 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116805317 GeneID:226499 MGI:2385108
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC226499 isoform 2 protein_id : NP_001070705.1

name	BC003331 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116805315 CCDS:CCDS15355.1 GeneID:226499 MGI:2385108
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC226499 isoform 1 protein_id : NP_663486.2

name	Tpr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27477057 GeneID:108989 MGI:1922066
definition	GO_component : GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : nuclear pore complex-associated protein Tpr protein_id : NP_598541.2

name	EG625534 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82882918 GeneID:625534 MGI:3643639
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_895205.1

name	EG625534 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234333 GeneID:625534 MGI:3643639
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001480263.1

name	EG545370 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701546 CCDS:CCDS15357.1 GeneID:545370 MGI:3646881
definition	codon_start : 1 product : hypothetical protein LOC545370 protein_id : NP_001019891.1

name	LOC435647 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435647
definition	number : 1 pseudo : _no_value

name	LOC435647 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435647
definition	number : 2 pseudo : _no_value

name	LOC100042813 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042813
definition	number : 1 pseudo : _no_value

name	LOC100042813 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042813
definition	number : 2 pseudo : _no_value

name	LOC676712 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676712
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:225157
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128641
definition	standard_name : D1Mit288

name	(CDS detail)
type	STS
link
xref	UniSTS:163173
definition	standard_name : RH126465

name	(CDS detail)
type	STS
link
xref	UniSTS:128728
definition	standard_name : D1Mit369

name	(CDS detail)
type	STS
link
xref	UniSTS:158864
definition	standard_name : MHAa78c8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:158862
definition	standard_name : M72394

name	(CDS detail)
type	STS
link
xref	UniSTS:254306
definition	standard_name : Ptgs2

name	(CDS detail)
type	STS
link
xref	UniSTS:272389
definition	standard_name : PMC27868P2

name	(CDS detail)
type	STS
link
xref	UniSTS:256486
definition	standard_name : Ptgs2

name	(CDS detail)
type	STS
link
xref	UniSTS:271010
definition	standard_name : PMC14708P2

name	(CDS detail)
type	STS
link
xref	UniSTS:271683
definition	standard_name : PMC18294P1

name	(CDS detail)
type	STS
link
xref	UniSTS:271016
definition	standard_name : PMC148819P3

name	(CDS detail)
type	STS
link
xref	UniSTS:224190
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178476
definition	standard_name : M88242

name	(CDS detail)
type	STS
link
xref	UniSTS:128541
definition	standard_name : D1Mit200

name	(CDS detail)
type	STS
link
xref	UniSTS:463217
definition	standard_name : Pdc

name	(CDS detail)
type	STS
link
xref	UniSTS:158863
definition	standard_name : C77892

name	(CDS detail)
type	STS
link
xref	UniSTS:124435
definition	standard_name : 41.MMHAP84FRF11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128705
definition	standard_name : D1Mit346

name	(CDS detail)
type	STS
link
xref	UniSTS:128533
definition	standard_name : D1Mit195

name	LOC100043261 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234331 GeneID:100043261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 74 ESTs, 2 Proteins product : similar to Bex4 protein pseudo : _no_value transcript_id : XR_034577.1

clone name	MSMg01-384I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275N23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-121B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069N18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-116D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056K04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name		B6Ng01-080A08.g
ACC		DH895273
length		996
definition		DH895273\|Mus musculus domesticus DNA, BAC clone: B6Ng01-080A08, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence		gaattcttatcacataatctgacatgctgctctttctcctattgtggcct taggatttttatggactttaccgcatgccaaaactggctgactgaagaaa gcagggctctccagtcatgtctgaatagcatattgtagtgaaacgattca aactgggaggaacaggaggaacattttaacaatgtatggttgtagagagg gaacccaccgcagaaagcagaccattcccattctacagtgaaggtaataa aatgggagagcaataatctccagtagttgtgctgaggaaagctactgaac ctagaggcagcctgaagtcctaaccatgccaattgtacacacccgaggga gtgaaggaactcatccttggttataaacagactttgctttcataagatga ctatcttgggggccatcatcttgaaatcacaaaagataaagggatgagca aaaaaaaaatggttttgatttgcaaaatcttacacatttacagaagacaa tgcttcctcaaatcatcacaactaaatgttctttccagtctgagtccagc atccaggaagcaaaatctggaggatttctgtgagtttgaggagagccaga attacagggatactgcctcaagcaaacaaaataaataaacaaacaaaaaa gaaagaaagagaggaagaaagaaaggagagagagagagagagcgagcatt acaagtgaggaactgaagcattggttgcaagggttataccctgacctaca ctcatccatttccaggacttaaaaataaaatgttttattacatttattta tttatttatttatttatttatgaatgaatggtggggcaaacagcccaaat aaaatgtttttttacatttatttatttatttatttattatttatttatta cttattatgaatggtgggacaacaggccaagcatatgtgtgatgttcatg gtataatgtgtgggagtgttcctgttagggttcaaatgctggacaa
quality values		Open. Hide. 55 47 52 49 43 15 15 14 12 12 12 12 10 8 12 12 31 41 59 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 55 59 59 61 61 59 59 59 49 37 23 30 30 35 52 49 59 59 59 59 59 61 61 59 55 55 55 59 59 61 59 61 59 61 61 61 61 59 61 61 61 59 61 61 61 59 59 61 61 61 61 61 55 61 59 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 59 61 59 59 59 59 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 59 59 59 59 55 43 59 59 59 59 50 55 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 59 61 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 59 59 59 61 61 61 61 61 59 59 61 61 59 59 61 61 61 59 61 61 61 61 59 61 61 61 61 59 59 61 61 61 59 61 61 61 59 61 59 61 59 59 59 59 59 61 61 59 61 61 61 59 59 59 52 59 59 61 59 61 61 61 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 52 52 45 52 49 59 52 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 59 61 59 59 61 59 59 40 59 61 59 61 61 61 61 61 59 59 59 59 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 55 52 52 55 55 55 55 61 61 61 61 55 61 61 61 61 61 61 55 49 41 61 61 36 55 52 49 52 52 61 55 61 55 61 61 61 61 55 61 55 50 50 50 55 50 55 61 61 61 55 43 50 55 49 24 37 22 10 24 16 61 61 61 61 55 55 61 61 61 61 61 55 61 61 61 27 50 14 12 10 12 15 12 43 50 61 53 50 50 43 50 61 50 53 53 53 50 47 61 50 61 50 50 61 61 61 61 47 53 53 61 33 61 42 33 37 50 35 50 52 40 53 50 39 39 28 29 50 39 43 61 50 53 42 39 61 50 39 43 50 53 42 42 50 34 35 32 14 24 31 50 34 43 43 61 32 53 53 35 53 50 45 45 53 23 45 40 53 28 38 45 47 36 32 32 32 27 38 30 45 27 32 34 43 26 28 25 27 26 43 28 28 38 20 15 38 23 38 38 47 10 13 30 47 47 30 50 31 47 33 43 32 53 52 53 32 57 45 57 37 52 52 53 45 53 14 36 52 37 38 10 45 45 36 32 52 36 43 39 22 36 50 45 37 20 17 38 34 37 31 38 29 30 52 41 43 35 23 33 57 46 23 27 33 45 31 34 57 46 37 41 33 30 53 42 44 57 35 36 50 42 28 42 36 57 24 33 57 32 33 53 38 41 39 31 29 52 38 34 53 53 53 38 42 37 53 52 33 36 47 28 53 48 37 23 29 22 24 33 16 37 47 52 31 17 53 22 32 43 40 31 22 33 53 40 33 24 25 26 27 17 30 29 36 40 41 31 33 37 33 32 17 13 31 39 19 20 30 33 19 53 47 45 44 32 29 45 25 28 29 30 29 30 30 36 35 30 27 33 44 39 45 12 46 36 27 32 33 44 47 31 17 29 16 31 25 19 29 20 23 19 17 21 47 16 31 26 14 22 29 33 24 12 12 14 19 12 6 37 9 18 10 9 11 14 8 15 19 11 18 23 20 24 27 18 12 20 22 15 5 29 21 9 30 29 29 24 12 17 18 27 23 13 20 26 17 30 41 20 29 21 10 7 7 7 7 12 29 11 11 5 32 9 20 23 20 12 5 5 6 8 5 6 20 21 7 6 5 8 14 9 7 17 6 8 8 7 17 15 10 8 7 9 29 11 13 36 15 26 14 17 8 28 20 12 13 19 6 28 9 17 11 17 26

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_151816291_151817294
seq2: B6Ng01-080A08.g_69_1064

seq1  GAATTCTTATCACATAATCTGACATGCTGCTCTTTCTCCTATTGTGGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCACATAATCTGACATGCTGCTCTTTCTCCTATTGTGGCCT  50

seq1  TAGGATTTTTATGGACTTTACCGCATGCCAAAACTGGCTGACTGAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTTTTATGGACTTTACCGCATGCCAAAACTGGCTGACTGAAGAAA  100

seq1  GCAGGGCTCTCCAGTCATGTCTGAATAGCATATTGTAGTGAAACGATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCTCTCCAGTCATGTCTGAATAGCATATTGTAGTGAAACGATTCA  150

seq1  AACTGGGAGGAACAGGAGGAACATTTTAACAATGTATGGTTGTAGAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGAGGAACAGGAGGAACATTTTAACAATGTATGGTTGTAGAGAGG  200

seq1  GAACCCACCGCAGAAAGCAGACCATTCCCATTCTACAGTGAAGGTAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCACCGCAGAAAGCAGACCATTCCCATTCTACAGTGAAGGTAATAA  250

seq1  AATGGGAGAGCAATAATCTCCAGTAGTTGTGCTGAGGAAAGCTACTGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAGAGCAATAATCTCCAGTAGTTGTGCTGAGGAAAGCTACTGAAC  300

seq1  CTAGAGGCAGCCTGAAGTCCTAACCATGCCAATTGTACACACCCGAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGGCAGCCTGAAGTCCTAACCATGCCAATTGTACACACCCGAGGGA  350

seq1  GTGAAGGAACTCATCCTTGGTTATAAACAGACTTTGCTTTCATAAGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGAACTCATCCTTGGTTATAAACAGACTTTGCTTTCATAAGATGA  400

seq1  CTATCTTGGGGGCCATCATCTTGAAATCACAAAAGATAAAGGGATGAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTGGGGGCCATCATCTTGAAATCACAAAAGATAAAGGGATGAGCA  450

seq1  AAAAAAAAATGGTTTTGATTTGCAAAATCTTACACATTTACAGAAGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATGGTTTTGATTTGCAAAATCTTACACATTTACAGAAGACAA  500

seq1  TGCTTCCTCAAATCATCACAACTAAATGTTCTTTCCAGTCTGAGTCCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTCAAATCATCACAACTAAATGTTCTTTCCAGTCTGAGTCCAGC  550

seq1  ATCCAGGAAGCAAAATCTGGAGGATTTCTGTGAGTTTGAGGAGAGCCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGAAGCAAAATCTGGAGGATTTCTGTGAGTTTGAGGAGAGCCAGA  600

seq1  ATTACAGGGATACTGCCTCAAGCAAACAAAATAAATAAACAAACAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGGGATACTGCCTCAAGCAAACAAAATAAATAAACAAACAAAAAA  650

seq1  GAAAGAAAGAGAGGAAGAAAGAAAGGAGAGAGAGAGAGAGAGCGAGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAGAGGAAGAAAGAAAGGAGAGAGAGAGAGAGAGCGAGCATT  700

seq1  ACAAGTGAGGAACTGAAGCATTGGTTGCAAGGGTTATACCCTGACCTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGAGGAACTGAAGCATTGGTTGCAAGGGTTATACCCTGACCTACA  750

seq1  CTCATCCATTTCCAGGACTTAAAAATAAAATGTTTTATTACATTTATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCATTTCCAGGACTTAAAAATAAAATGTTTTATTACATTTATTTA  800

seq1  TTTATTTATTTATTTATTTATGAATGAATGGTGGGGCAAACAGCCCAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTATTTATTTATGAATGAATGGTGGGGCAAACAGCCCAAAT  850

seq1  AAAATGTTTTTTTTACATTTATTTATTTATTTATTTATTTATTTATTTAT  900
      |||||| |||||||||||||||||||||||||||||| ||||||||||| 
seq2  AAAATG-TTTTTTTACATTTATTTATTTATTTATTTA-TTATTTATTTA-  897

seq1  TTATTTATTTATGAATGGTGGGACAAACAGGCCAAAGCATATGTGTGATG  950
      ||| ||| |||||||||||||||| |||||||| ||||||||||||||||
seq2  TTACTTA-TTATGAATGGTGGGAC-AACAGGCC-AAGCATATGTGTGATG  944

seq1  GTCAGTGGAAAATGTGTGGGAGTTGGTTCCTGTTAGGGTTCAAATGCTGG  1000
       |||  | | |||||||||||||  |||||||||||||||||||||||||
seq2  TTCATGGTATAATGTGTGGGAGT--GTTCCTGTTAGGGTTCAAATGCTGG  992

seq1  ACAA  1004
      ||||
seq2  ACAA  996

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information