BAC Information

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BAC

Clone NameB6Ng01-080K23
Chromosome1 (Build37)
Map Location 74,371,985 - 74,372,159
singlet/doubletsinglet
Overlap genePnkd
Upstream genePinc, LOC672208, LOC100043291, Tns1, Rufy4, Il8rb, Il8ra, Arpc2, Gpbar1, Aamp, Tmbim1, 2410125D13Rik
Downstream geneGm216, Slc11a1, Ctdsp1, Vil1, Usp37, Rqcd1, Plcd4, Zfp142, Bcs1l, Rnf25, Stk36, Ttll4, Cyp27a1, Prkag3, Wnt6, Wnt10a, LOC100042901, Cdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080K23.bB6Ng01-080K23.g
ACCDH895753DH895754
length1,161175
definitionDH895753|Mus musculus domesticus DNA, BAC clone: B6Ng01-080K23, 5' end.DH895754|Mus musculus domesticus DNA, BAC clone: B6Ng01-080K23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtgccttctggcttccatagatgctaatacatgcccatattca
gacacacatgcatccttataattaaacatagaataaatctttttaaccaa
agttatatatttgagttaaatttatcaagaaagaggaacttcttttggag
gaagggagaaaggtaaattgaaacgtatggaggttagcagtatttagaca
agtttattgtaatttgaatattttggatgaaaagataatttttcttttct
ttctttctttctttctttctttctttctttttttttttaaagctaagtca
taacattaaaaatgtggtactacgacccagtggaataaaacaaagccgcc
taatgttgactttacaagataacagcttcttgtctattgacaaagtacca
agtaaggatgcagaggaaatgaggttgttcctagatgccgtccatcaaaa
cagacttcatgcaggtaagcaccagccatatggtgagtctaacattaaca
gttctaaaggaatgtgatgactaagggctggatatgggactcacttggta
gagtgtttgtctcgcatgtacaaggccctggagtcgatccctaacagctc
agtacatagaaactgagcatggtgggcatgcatgtaatcccaacacgagc
agaggcgagaggatcaaagtttaagatcatccttagcagcatgagctatc
tgagatgatgtgagctcaggctagcctaagctgtatgagtcaaagaatat
gacaactgtacactagtattcctgatagaaaaatcctcagctaagtacta
ttggactgagttaagtggcacaatacaagaattagttaaatttattcctg
gaatgttagaatagtgcagcatggaaatgagtctatataatgtaccacat
taacagaaagaaaggacaagaacatataatcatctaaaaaatgacaaaat
ttaatattctttgacaattaaatactctattaaatagactatgggtagaa
aaaccatggtcaacgtgataaggattttcattttagcacacagctttaca
cattagagaaaatctaaagccttttctctgaatcatatattaaggattct
atcttgcaccatctgtcaaatagacattgaaatctggccagacaactgtg
catggagatat
caggacagccaaggctacacagagaaaccctgtcttgaacaaaaacaaga
aagaaagagagagagagagagagagagggagggagagagagagagaaaga
ggagatattaaaggcacacagcaccaacacctggtttgagagaacttttt
gttggttggttgtttttgttgttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_74371985_74372159
seq2: B6Ng01-080K23.g_76_250

seq1  CAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTTGAACAAAAACAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTTGAACAAAAACAAGA  50

seq1  AAGAAAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGAGAGAGAGAGAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGAGAGAGAGAGAAAGA  100

seq1  GGAGATATTAAAGGCACACAGCACCAACACCTGGTTTGAGAGAACTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATATTAAAGGCACACAGCACCAACACCTGGTTTGAGAGAACTTTTT  150

seq1  GTTGGTTGGTTGTTTTTGTTGTTGT  175
      |||||||||||||||||||||||||
seq2  GTTGGTTGGTTGTTTTTGTTGTTGT  175