BAC Information

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BAC

Clone NameB6Ng01-081C07
Chromosome1 (Build37)
Map Location 81,084,325 - 81,234,982
singlet/doubletdoublet
Overlap gene9430031J16Rik
Upstream geneLOC100039325, A830043J08Rik, 2310015K22Rik, Cul3, EG620899, 1700016L21Rik, Dock10, LOC665092
Downstream geneEG621020, LOC433328, EG665145, Irs1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081C07.bB6Ng01-081C07.g
ACCDH896080DH896081
length865735
definitionDH896080|Mus musculus domesticus DNA, BAC clone: B6Ng01-081C07, 5' end.DH896081|Mus musculus domesticus DNA, BAC clone: B6Ng01-081C07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,084,325 - 81,085,188)(81,234,250 - 81,234,982)
sequence
gaattcaattttctcaccataaaagcttgtgttgaacaacctcttgataa
aagcaccagggaacacagatacatttttaacagccacacttttatgagca
tgtccacctttaatggcctatgtttatagttcttaccttaaaatagagtt
catcttcttcctataatatgaccaagaccagtgaataatgagatgttcat
gagcctctgaaggcagttggaatccttggtgtatgctcctgtgcaatttt
atggcgattatacctcttggtttggtaccaagggtcccgggtttgttcaa
atgaaattgctttcatgatgtaacagctactagtgacaagataatgagac
ccagactgccgccttccaaatggaggttaaactcctagtgcgtgcacaca
aaagaaacagacacaactcttctttgttgttgttgttgttgtcgttgttt
ttatagagaaaaataaagcagggttttattttccctgtgtgcatgtttcc
ctgcagtcacacactgtgtttcatggaatcctgttttattactggaagtc
atttatttacaaagttcaaaatttttaaaatgtagaaaattacttctttc
ggttatctgcatgactgaatagtgattgaatgtttggatagttcgtagag
gattttctaccccaaatgatatccccatagtctctcgaaagattacaatg
ttaaggaaatgaaaatatttttttcacattcaattgtttaggtcataaag
aggtgaggtaatgtggcatgacactagtactttaaagaaaatgttttcca
tgttagagaaagacagagggaggagaaaggagggatggagtgaaaaagta
gaagggggagataga
gaattcaggctttatacattgtccaaactagcaatgtggaccgagaaacc
tggaggcaataatcctctttctcatacaggacagaaggaaacctttggga
tgggaggggtgagttattgcctatgttttcctcaaatggtgaccaaatgc
agaaaggaacaaaaatgaaataaagacctttaaattcgtgaaaggaataa
agaaagttcctatatcagaaaaaaacatagcataattaactaagacagaa
cagctaatgttaagaaatatggacaagccttttagaacatggagataatt
taaacttgaaccaattgtagatactgtgtacaaggaaaaccaaatataat
acaagaatattctggtgacattgagatgatcaaaactggcagttaccatt
gcttgaactggggttcttctagcacacacaaaaaccccatgttcaagacc
tcaaccaatatcacgacacctgaagagagagctgtggtagacatgaaagc
ttggcaggagtcttgagtgtaaggggcctttgtggtaattggaagggtct
ctcctcatttccttatctgttacaccagaacacagagggaagtcatccct
tttcttttttttttttaattaggtatttagctcatttacatttccaatgc
tataccaaaagtccccccatacccacccacccccactcccctacccaccc
actcccccctttttggccctggcgttcctctgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_81084325_81085188
seq2: B6Ng01-081C07.b_35_899

seq1  GAATTCAATTTTCTCACCATAAAAGCTTGTGTTGAACAACCTCTTGATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTTCTCACCATAAAAGCTTGTGTTGAACAACCTCTTGATAA  50

seq1  AAGCACCAGGGAACACAGATACATTTTTAACAGCCACACTTTTATGAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCAGGGAACACAGATACATTTTTAACAGCCACACTTTTATGAGCA  100

seq1  TGTCCACCTTTAATGGCCTATGTTTATAGTTCTTACCTTAAAATAGAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCACCTTTAATGGCCTATGTTTATAGTTCTTACCTTAAAATAGAGTT  150

seq1  CATCTTCTTCCTATAATATGACCAAGACCAGTGAATAATGAGATGTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCTTCCTATAATATGACCAAGACCAGTGAATAATGAGATGTTCAT  200

seq1  GAGCCTCTGAAGGCAGTTGGAATCCTTGGTGTATGCTCCTGTGCAATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCTGAAGGCAGTTGGAATCCTTGGTGTATGCTCCTGTGCAATTTT  250

seq1  ATGGCGATTATACCTCTTGGTTTGGTACCAAGGGTCCCGGGTTTGTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCGATTATACCTCTTGGTTTGGTACCAAGGGTCCCGGGTTTGTTCAA  300

seq1  ATGAAATTGCTTTCATGATGTAACAGCTACTAGTGACAAGATAATGAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTGCTTTCATGATGTAACAGCTACTAGTGACAAGATAATGAGAC  350

seq1  CCAGACTGCCGCCTTCCAAATGGAGGTTAAACTCCTAGTGCGTGCACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTGCCGCCTTCCAAATGGAGGTTAAACTCCTAGTGCGTGCACACA  400

seq1  AAAGAAACAGACACAACTCTTCTTTGTTGTTGTTGTTGTTGTCGTTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACAGACACAACTCTTCTTTGTTGTTGTTGTTGTTGTCGTTGTTT  450

seq1  TTATAGAGAAAAATAAAGCAGGGTTTTATTTTCCCTGTGTGCATGTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGAGAAAAATAAAGCAGGGTTTTATTTTCCCTGTGTGCATGTTTCC  500

seq1  CTGCAGTCACACACTGTGTTTCATGGAATCCTGTTTTATTACTGGAAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTCACACACTGTGTTTCATGGAATCCTGTTTTATTACTGGAAGTC  550

seq1  ATTTATTTACAAAGTTCAAAATTTTTAAAATGTAGAAAATTACTTCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTACAAAGTTCAAAATTTTTAAAATGTAGAAAATTACTTCTTTC  600

seq1  GGTTATCTGCATGACTGAATAGTGATTGAATGTTTGGATAGTTCGTAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCTGCATGACTGAATAGTGATTGAATGTTTGGATAGTTCGTAGAG  650

seq1  GATTTTCTACCCCAAATGATATCCCCATAGTCTCTCGAAAGATTACAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTACCCCAAATGATATCCCCATAGTCTCTCGAAAGATTACAATG  700

seq1  TTAAGGAAATGAAAATATTTTTTTCACATTCAATTGTTTAGGTCATAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGAAATGAAAATATTTTTTTCACATTCAATTGTTTAGGTCATAAAG  750

seq1  AGGTGAGGTAATGTGGCATGACACTAGTACTTTAAAGAAAATGTTTTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGGTAATGTGGCATGACACTAGTACTTTAAAGAAAATGTTTTCCA  800

seq1  TGTTAGAGAAAGACAGAGGGAGGAGAAAGGAGGGATGGAGTGAAAAAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAGAAAGACAGAGGGAGGAGAAAGGAGGGATGGAGTGAAAAAGTA  850

seq1  G-AGGGGGAGATAGA  864
      | |||||||||||||
seq2  GAAGGGGGAGATAGA  865

seq1: chr1_81234250_81234982
seq2: B6Ng01-081C07.g_70_804 (reverse)

seq1  GTACAGGGGAACGCCAGGGCCAAAAA-GGGGGAGTGGGTGGGTAGGGGAG  49
      |||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  GTACAGAGGAACGCCAGGGCCAAAAAGGGGGGAGTGGGTGGGTAGGGGAG  50

seq1  TGGGGGTGGGTGGGTAT-GGGGGACTTTTGGTATAGCATTGGAAATGTAA  98
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGGGGGTGGGTGGGTATGGGGGGACTTTTGGTATAGCATTGGAAATGTAA  100

seq1  ATGAGCTAAATACCTAATTAAAAAAAAAAAAGAAAAGGGATGACTTCCCT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTAAATACCTAATTAAAAAAAAAAAAGAAAAGGGATGACTTCCCT  150

seq1  CTGTGTTCTGGTGTAACAGATAAGGAAATGAGGAGAGACCCTTCCAATTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTCTGGTGTAACAGATAAGGAAATGAGGAGAGACCCTTCCAATTA  200

seq1  CCACAAAGGCCCCTTACACTCAAGACTCCTGCCAAGCTTTCATGTCTACC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAGGCCCCTTACACTCAAGACTCCTGCCAAGCTTTCATGTCTACC  250

seq1  ACAGCTCTCTCTTCAGGTGTCGTGATATTGGTTGAGGTCTTGAACATGGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCTCTCTTCAGGTGTCGTGATATTGGTTGAGGTCTTGAACATGGG  300

seq1  GTTTTTGTGTGTGCTAGAAGAACCCCAGTTCAAGCAATGGTAACTGCCAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTGTGTGCTAGAAGAACCCCAGTTCAAGCAATGGTAACTGCCAG  350

seq1  TTTTGATCATCTCAATGTCACCAGAATATTCTTGTATTATATTTGGTTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATCATCTCAATGTCACCAGAATATTCTTGTATTATATTTGGTTTT  400

seq1  CCTTGTACACAGTATCTACAATTGGTTCAAGTTTAAATTATCTCCATGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACACAGTATCTACAATTGGTTCAAGTTTAAATTATCTCCATGTT  450

seq1  CTAAAAGGCTTGTCCATATTTCTTAACATTAGCTGTTCTGTCTTAGTTAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGGCTTGTCCATATTTCTTAACATTAGCTGTTCTGTCTTAGTTAA  500

seq1  TTATGCTATGTTTTTTTCTGATATAGGAACTTTCTTTATTCCTTTCACGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTATGTTTTTTTCTGATATAGGAACTTTCTTTATTCCTTTCACGA  550

seq1  ATTTAAAGGTCTTTATTTCATTTTTGTTCCTTTCTGCATTTGGTCACCAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGGTCTTTATTTCATTTTTGTTCCTTTCTGCATTTGGTCACCAT  600

seq1  TTGAGGAAAACATAGGCAATAACTCACCCCTCCCATCCCAAAGGTTTCCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAAAACATAGGCAATAACTCACCCCTCCCATCCCAAAGGTTTCCT  650

seq1  TCTGTCCTGTATGAGAAAGAGGATTATTGCCTCCAGGTTTCTCGGTCCAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTGTATGAGAAAGAGGATTATTGCCTCCAGGTTTCTCGGTCCAC  700

seq1  ATTGCTAGTTTGGACAATGTATAAAGCCTGAATTC  733
      |||||||||||||||||||||||||||||||||||
seq2  ATTGCTAGTTTGGACAATGTATAAAGCCTGAATTC  735