BAC Information

Click to search

BAC

Clone NameB6Ng01-081I17
Chromosome1 (Build37)
Map Location 61,720,639 - 61,721,195
singlet/doubletsinglet
Overlap genePard3b
Upstream geneEif4a-ps4, Cd28, LOC667555, Rpl18-rs8, Ctla4, LOC100043049, Icos, LOC433313, LOC100042566
Downstream geneLOC667592
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081I17.bB6Ng01-081I17.g
ACCDH896366DH896367
length1,078616
definitionDH896366|Mus musculus domesticus DNA, BAC clone: B6Ng01-081I17, 5' end.DH896367|Mus musculus domesticus DNA, BAC clone: B6Ng01-081I17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctatattgggacatcgagcctccacaggaccaaggggctctc
ttctcactgatgttcgataaggccatcctctgttatatatgcagttggag
ccatgggtccctccatgtgtactctttggttgatgatttagtccctggga
gctctggggtgactggttggttgatattattgttcttcttatggggttgc
aaaccccttcagctccttcagtcctttctctaactcctccattggggatc
cagtgctcagtctaatggttggctgccagcatcaccctttgtatttgtca
gtctctggcaaagcctcacaggagacagcaatatcaggctcctgacagca
tgcactttttggtatccacaatagtgtctgggcttggtgactgtatatgg
gatggatcccaagaggggcagtctttggatggccttaccttcagtttctg
ctccacactttgtctccgtatttgctcccatgagtattctgttccccttt
ctaagaaggaccaaactatttctaacagatgttgtcacttatcccacaat
ataagagcccccatggtgggaaagagagtaagaagttcagctgtgggcat
tcagttgggattctagttaactggaaacagccctaatttcctcaagttgt
ttttttgctagatgttgtaaacattttatataatctcagtctctctctga
ctctctctgtgtctctgtgtctctctctgtgtctctctctctttctgtct
ctctctttctgtctgtctttgtctctctctcactgtctctctctgtctct
ctgtctctgtctctgtctctgtctctgtctctctctctctctcacacaca
cacacatttggcttgtcaatactaaaatactcacttatccaaaactgaaa
gtacggttgctatggtgtatctggctgtacacaggcaggctttctcttac
tgaattcattgcaccttaatctcgatgtccatatctggaacttgggaata
cattttatttcccttatattacaggccactccagttaaggttgtttattt
aatagtactccacggtgagacatcagat
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttagat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
tttggtgatatgggactgttttagatggtcaacttgatcctgattcaact
ttggttcctggtatctgtccagaaatttgtccatttcgtccaggttttcc
agttttgttgagtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_61720639_61721195
seq2: B6Ng01-081I17.g_125_682 (reverse)

seq1  ATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACA  50

seq1  GATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCT-AAACAG  99
      ||||||||| ||||||||||||||||||||||||||||||||| ||||||
seq2  GATACCAGGAACCAAAGTTGAATCAGGATCAAGTTGACCATCTAAAACAG  100

seq1  TCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACCA  149
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCCCATATCACCAAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACCA  150

seq1  AAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTC  200

seq1  AAAGAAGATCTAATTCCAATTCTGCACAAACTATTTCACAAAATAGAAGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGATCTAATTCCAATTCTGCACAAACTATTTCACAAAATAGAAGT  250

seq1  AGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATAC  300

seq1  CTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCT  349
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTAAACCACAGAAAGATCTAACAAAGATAGAGAACTTCAGACCAATTTCT  350

seq1  CTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAAT  400

seq1  CCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTC  450

seq1  CAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCAT  500

seq1  TATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGC  550

seq1  AGAAAAAG  557
      ||||||||
seq2  AGAAAAAG  558