BAC Information

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BAC

Clone NameB6Ng01-081P07
Chromosome1 (Build37)
Map Location 143,070,604 - 143,071,526
singlet/doubletsinglet
Overlap genenone
Upstream geneCfh, Kcnt2
Downstream geneEG226472, LOC639376
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081P07.bB6Ng01-081P07.g
ACCDH896656DH896657
length9021,242
definitionDH896656|Mus musculus domesticus DNA, BAC clone: B6Ng01-081P07, 5' end.DH896657|Mus musculus domesticus DNA, BAC clone: B6Ng01-081P07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaggtagataaacaaagttcagggatagggcctagagaaggg
tctttgataaacataaggatagatcttattggtagaggatgcaaagtaca
tgggacatctttcatagtgatgtgttctattcaatgagacacaaagctca
ggatcgggacctaaaaaatactcaggatattaaaggaatttccagtggga
gcaggttcctaatagactattaaagatgcatcagattgactgaccatttt
tactctagcattccaagtgaccaggcatcatttatttctctacattgaat
aaaatagacccacatgattatcaatccttgtttctccaacacttattata
aggtaagcttcctacagtataaaattgaagtcaaagttctatgattgcct
tttgagaagcactatcaatgacttgctatcttccctctagtttctattca
gtggttccctactaaaaagtcccactattccccaagagtaccaatcaaga
ttttcccatggtccaatcacctgttgaatcatctttctgatgtgtaagtc
cacatcatgttgcccattcctatagacaataattaccatgactttgtcag
tgcttcctcctgtgactctctgtttcctttcatcaatgaagagaaagaaa
atgtaaacaaggaagttcagtattggctccttccaagtactaatttctca
taaaatctgccctttaaattttctgaactatttagtaagcactgagggag
acaaagatcagatgacttattgtgcagccagacaatgaaatgatggacct
cccacctttgatctggaatattttttatgcgaattacatgattttttctg
aatgccttttttcctcaatttctcgcttcataaacattgaagacaatgat
tg
gaattcacacacctatggtcacttgatctttgacaagggagctaaaacca
tccagtggaaaaaagacaccaacaaatagtgctggcacaactgacagtta
tcatgtagaagaatgttaattgatccattcctatctccttgtactaagat
caaatctaagtggatcaaggaactccacataaaaccagagacagcaaaac
ttatagaggacaaagtgtggaaaagcctcaaagatatgggcacagtggga
aaattcctgaatagaatagcaatggcttgtgctgtaagatcaagaatcat
caaatgggaccgcataaaattgcaaagtttctgtaaggcaaaagacacca
tcaataaaacaaagaggccaccaacagattgggaaaggatctttacctat
cctaaatcagataagggactaatatccaatatatataaagaactgaaggg
ggtggactccagaaaatcaaataaccccattaaaaaatgggactcagagc
taaacaaagaattttcacctgaggaattccaaatggctgagaaggaccta
aaaaaatgttcagcatccttaatcatcaggagaatgcaaatcaaagcaac
cctgagattctacctcacaccagtcagaatggctaagatcaaaaattcag
gtaacagcagatgctggcatggatgtggagaaagaggaagactcttccat
tgttggtgggattgcaaccttgtacaaccacgctggaaatcagtctggcg
ggtcctcagaaaattggacatagtaatactggaggatcccacaatacctc
tcctgggcatatatccagaagatgtcccaaccggtaagaaggacacacgc
tccactatgttcatagcaaccttattttttaatagcccagacactggaaa
gaatcgagatgccccttcacagaggaatggatacagaaattgttggtaca
tttacacaatggagtactactcagctatcaaaagattgaatttatgaaat
tcctaggcaaatggatggacttgaaaggcatcatcctgaggtgaaggtaa
cccatccacaaaagactccacttgatttgtacttactgataggtggatat
tagcccagaaactttagaatcccagaaataagaatacatttcaaaaccat
gaactcgaaaagaaaaggtgcaaattggtacctgagcctcttctttaaat
gtgaaccaaataccttgagagggaggtacagtagataacata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_143070604_143071526
seq2: B6Ng01-081P07.b_48_949

seq1  GAATTCTTTAGGTAGATAAACAAAGTTCAGGGATAGGGCCTAGAGAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGGTAGATAAACAAAGTTCAGGGATAGGGCCTAGAGAAGGG  50

seq1  TCTTTGATAAACATAAGGATAGATCTTATTGGTAGAGGATGCAAAGTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGATAAACATAAGGATAGATCTTATTGGTAGAGGATGCAAAGTACA  100

seq1  TGGGACATCTTTCATAGTGATGTGTTCTATTCAATGAGACACAAAGCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACATCTTTCATAGTGATGTGTTCTATTCAATGAGACACAAAGCTCA  150

seq1  GGATCGGGACCTAAAAAATACTCAGGATATTAAAGGAATTTCCAGTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCGGGACCTAAAAAATACTCAGGATATTAAAGGAATTTCCAGTGGGA  200

seq1  GCAGGTTCCTAATAGACTATTAAAGATGCATCAGATTGACTGACCATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTTCCTAATAGACTATTAAAGATGCATCAGATTGACTGACCATTTT  250

seq1  TACTCTAGCATTCCAAGTGACCAGGCATCATTTATTTCTCTACATTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTAGCATTCCAAGTGACCAGGCATCATTTATTTCTCTACATTGAAT  300

seq1  AAAATAGACCCACATGATTATCAATCCTTGTTTCTCCAACACTTATTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGACCCACATGATTATCAATCCTTGTTTCTCCAACACTTATTATA  350

seq1  AGGTAAGCTTCCTACAGTATAAAATTGAAGTCAAAGTTCTATGATTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGCTTCCTACAGTATAAAATTGAAGTCAAAGTTCTATGATTGCCT  400

seq1  TTTGAGAAGCACTATCAATGACTTGCTATCTTCCCTCTAGTTTCTATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAGCACTATCAATGACTTGCTATCTTCCCTCTAGTTTCTATTCA  450

seq1  GTGGTTCCCTACTAAAAAGTCCCACTATTCCCCAAGAGTACCAATCAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCCCTACTAAAAAGTCCCACTATTCCCCAAGAGTACCAATCAAGA  500

seq1  TTTTCCCATGGTCCAATCACCTGTTGAATCATCTTTCTGATGTGTAAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCATGGTCCAATCACCTGTTGAATCATCTTTCTGATGTGTAAGTC  550

seq1  CACATCATGTTGCCCATTCCTATAGACAATAATTACCATGACTTTGTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCATGTTGCCCATTCCTATAGACAATAATTACCATGACTTTGTCAG  600

seq1  TGCTTCCTCCTGTGACTCTCTGTTTCCTTTCATCAATGAAGAGAAAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTCCTGTGACTCTCTGTTTCCTTTCATCAATGAAGAGAAAGAAA  650

seq1  ATGTAAACAAGGAAGTTCAGTATTGGCTCCTTCCAAGTACTTAATTTTCT  700
      |||||||||||||||||||||||||||||||||||||||| ||||||   
seq2  ATGTAAACAAGGAAGTTCAGTATTGGCTCCTTCCAAGTAC-TAATTT--C  697

seq1  TCATAAAAATCTGCCCTTTAAAAATATTCTGAAACTAATTTAGTAAAGCA  750
      |||| ||||||||||||||  |||| ||||| |||| ||||||| |||||
seq2  TCAT-AAAATCTGCCCTTT--AAATTTTCTG-AACT-ATTTAGT-AAGCA  741

seq1  CTGAGTGAGACAAAGATCAGAATGACTTTATTGTGCAGCCAGAACAAATG  800
      ||||| |||||||||||||| ||||| ||||||||||||||||   ||||
seq2  CTGAGGGAGACAAAGATCAG-ATGAC-TTATTGTGCAGCCAGA--CAATG  787

seq1  AGATGATGGACTTCCACACTTTGATCT-GAATATATTTTAATGCAGATTA  849
      | ||||||||| |||   ||||||||| |||||| |||| ||||  ||||
seq2  AAATGATGGACCTCCCACCTTTGATCTGGAATAT-TTTTTATGCGAATTA  836

seq1  CAATGGATATTTTCTGAAATGCTTTTTTCCTCAAATTTCTCTGCTTTCAT  899
      ||   ||| |||||||||   ||||||||||| |||||||| || |||||
seq2  CA--TGATTTTTTCTGAATGCCTTTTTTCCTC-AATTTCTC-GC-TTCAT  881

seq1  TAAAACTATTGAAGACAATGATTG  923
        |||| |||||||||||||||||
seq2  --AAAC-ATTGAAGACAATGATTG  902