BAC Information

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BAC

Clone NameB6Ng01-082P24
Chromosome1 (Build37)
Map Location 149,441,864 - 149,442,421
singlet/doubletsinglet
Overlap genenone
Upstream geneB830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082P24.bB6Ng01-082P24.g
ACCDH897386DH897387
length1,169913
definitionDH897386|Mus musculus domesticus DNA, BAC clone: B6Ng01-082P24, 5' end.DH897387|Mus musculus domesticus DNA, BAC clone: B6Ng01-082P24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccccacaacccccagggacaaggaataatagaaagaacacatcaa
accctaaaagcccaacttctaaaacaaaaggcaaccacctagcccccaat
gtatggctctgattaccctaaacatatttaacgtctacaaaaactccaaa
catcctcctatctccctccattgtctcataccaaaattagccctcccatc
ctagtatgatggtgagatctttgggacagaatttggaagggaccagaccc
cctccttacaaccggaaggggtttcacttgtgtctttccacaggaccagc
ctaagcctatctgggttcctgccagaaatgtctgacaccaccccaccaac
caagaagatgtcccatctctcactgacagatcaagaggaagaggcagagg
aaacaccacacccagaaggacaagatctactagaaggacatccatgacct
ggtgactgctgcccaggccatatgcccttcacaagccctcatctcctcta
ttctcttggctgtttttgtcattctcatgctacctgtgctgctgccaagc
ttctcctttaaccttcccaacacctaccattggagattctatgctaggga
aacctacaatggtcacaacaaagttataggggcccagctgtccacttgaa
ggatgtcaaacccggattgagatccccctacacccagattccatctccac
tacacccagcccttttctctgctttccttactgaaacacgggtgaatgtc
tacaggatgtctccacatatggaggttgcagatactggagctgcagaatg
gaatccaccagtcatggtggcagaatgatcaccaaccttaaaactcaagc
taaagggctctgcagccctataggaggaacacaatatgaactaaccagta
ccctgcccccagagcttgtgtctctagttgcatatgtagcagagttggcc
tagttggctatcatggagaaagccctgatcttgcaagatatatgccgagt
gactgaagcatgcagagactgtctcttgctatactgatccctcaagaaca
ctcccacaggctgcagagattctgtgacagctctgtacagccccaggacc
atgtaatctctaagaaatgttatgggcgttatcgagtcgagtcactactc
atgacagcagaaatatgtc
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttcttttttgtgtaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaattttgtccatttcgtccaggttttcc
agttttgttgagtatagccttttgtagaaggatctgatggtgttttggat
ttcttcaggatctgttgttatgtctccctttttcatttctgattttggta
attaggattttgtccctgtgccctttagtgagtctagctaagggtttatc
tatctttgtgattttctcaaagaaccaactcctcgtttggttatttcttt
gaatagttcttctgtttcacttgtttgatttcacccctgagttgatattt
cctgccgctactcctcttggtgaattgcttcctttttttctagggcttta
tatgtgttgtcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149441864_149442421
seq2: B6Ng01-082P24.g_428_979 (reverse)

seq1  TGACAACACATCTAAAAGCCCTAGAAAAAAAGGAAGCAAATTCACCCAAG  50
      ||||||||||| | ||||||||||||||||||||||| |||||| |||||
seq2  TGACAACACATAT-AAAGCCCTAGAAAAAAAGGAAGC-AATTCA-CCAAG  47

seq1  AGGAGTAGACGGCAGGAAATGATCAAACTCAGGGGTGAAAACAACCAAGT  100
      |||||||| ||||||||||| ||| ||||||||||||||| ||| |||||
seq2  AGGAGTAG-CGGCAGGAAAT-ATC-AACTCAGGGGTGAAATCAAACAAGT  94

seq1  GGAAACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCT  150
       ||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  -GAAAC-AGAAGAACTATTCAAAGAAATAACCAAACGAGGAGTTGGTTCT  142

seq1  TTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAAAGGG  200
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAAATCACAAAGATAGATAAACCCTTAGCTAGACTCACTAAAGGG  192

seq1  CACAGGGACAAAATCCTAATTAACAAAATCAGAAATG-AAAAGGGAGACA  249
      |||||||||||||||||||||| |||||||||||||| ||||||||||||
seq2  CACAGGGACAAAATCCTAATTACCAAAATCAGAAATGAAAAAGGGAGACA  242

seq1  TAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAA  292

seq1  AGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGAC-AAATTTC  348
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAAATTTC  342

seq1  TGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTA  392

seq1  AACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCC  442

seq1  AACCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGA  492

seq1  CCTTCAAAGAAGATCTAATTCCAATTCTGCACAAACTATTTCACAAAATA  548
      |||||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  CCTTCAAAGAAGATCTAATTCCAATTCTGCACAAACTATTACACAAAAAA  542

seq1  GAAGTAGAAG  558
      ||||||||||
seq2  GAAGTAGAAG  552