BAC Information

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BAC

Clone NameB6Ng01-083H22
Chromosome1 (Build37)
Map Location 148,964,209 - 148,965,305
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083H22.bB6Ng01-083H22.g
ACCDH897742DH897743
length1,2441,089
definitionDH897742|Mus musculus domesticus DNA, BAC clone: B6Ng01-083H22, 5' end.DH897743|Mus musculus domesticus DNA, BAC clone: B6Ng01-083H22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gattctcaactgaggcatatcgaatgtctaagaagcacctaaagaaatga
tgaatatccttagtcatgagggaaatgcaaatcaaaatgatcctgatatt
ccaccccacaccagtcagaatggctaagatcaaatactcaggtgacagca
gatgctggagatgatgtggagaaagaggaacactccattgctagtgggat
tgcaaggttaggtacaaccactctgtaaatcagtctggcagttggtcagg
aatttgaacatagtactatccgagaactcatctctaccactcctggacat
atatcccaaagatgatccaacacataacaagaacacatgctcaataatgt
tcatggcagccttatttataatagccagaagctggaaagaactcagatgt
ccttcaaaagaggaatggatacagaaaatgtgatacatttacacaatgga
gtactaatcagctattaaaaaaacaacgaattcatgaaattcttaggcaa
atgaatgtatctggaggatatcatcccgagtgaggtaacccaatcacaaa
aaaagaccatatccagaggttaggcaaggcctccagttgggggataggac
caccttgtaatctccaaatccttaacccagaagggctcctctctaaagga
aatagagggacaaagtgtggaacagagacagtaggaaaggccatccagag
actgccccacctggctatgcatccaatatacagtcaccaaaccaagacac
tattgtggctgccaagaagtgcttgctgacaggagcctgatgaaactgtc
tcctgagaattttgccagaacctgacaaatacaggggcagatgctcacag
ccaaccattggacttagcacagggtcttcaatggagtagttaaaggactg
aaggaactgaagaggtttgcaaccacataggaagaacaacaatatcaacc
aacagacccccagagttcccagggactaaaccaccaaccaaagagtatac
atggagggacccattagctccagcctcatattatagcagaataatgacac
tgggctggcatgaaatagaggagaagccccttggtcatggtgagacttga
ttcacagaatcaatgcaggcagggggaatgaggaagatgtcttgtttttc
taaaccatactctgggttcagtacaaacgaatcttaggtggaaaccctca
cacgtgaagtgcctttcgtcgtaggcgctacgatgtcgagtagg
gaattcattttttcttagagacaatcccaagtagataaattgacatctag
gagggttcacttcatcatttcaaatagctctagggacttacctatgtggg
tgttgtacagcaagacaattagtgagagtgtcacaaaggttcttcaagca
ctgaagcacatcctcagacgccactgcagagcttctgactgagatgtctt
gtagagttcctaaaatttatctagattctttgtgcttcagattcagtgtg
tgtaattgtgtatggtaaggcctaaaatatcatgcataagtattaaccag
gagtcataccccttaagagaatttattcattttttttcagaccattacaa
cagatgccagtaaaactgttaacatcctttgcacatatgtaaacaatcaa
tttacaataatggagtaggaagctgacttctgggcacaatatctataaag
aaaagattttgaggaaaatttcaccacatccacctagagacctctttgaa
gattcttaaaatatggggaagcagcctctcagataaaaacggaaggtgga
agagcaggaaggagagaggagaagaaatctgtgagggaggcaacatttgg
gatgcaaataaatacaataatttattttaaaagaaagaaaagggataaac
aacaacaacaataccctaagctatccatataaggggcaaacatctgtaga
aggagataagtaagtcaggactgttattttcctcagaaacatctggattt
tagtcagggtatagagtacccaacttcagttaagtagaacaatgtcactg
aaaactcacaacatttagtgttattctcttccctagagagcagtgcacaa
ctgaaaatgcagattattcctagatataacttatataagtctagattttt
ctagcaaactgtgaagacaaataaaagctacgaaaagaaaaagagggtct
gcaaagatctagactagaaaagacactaaactactcatgcactttgacta
ttagcagacatgagcaaatgacataggactgatgtgaaaaatcaaatcta
catgtagacccacgggactgtaaagcagaacaattatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148964209_148965305
seq2: B6Ng01-083H22.g_69_1157 (reverse)

seq1  TCATTATTGTTCTGCTTTACAGTCCCGTGGGTCTAACATGTAGATTTGAT  50
      |||| ||||||||||||||||||||||||||||| |||||||||||||| 
seq2  TCATAATTGTTCTGCTTTACAGTCCCGTGGGTCT-ACATGTAGATTTGA-  48

seq1  TTTTTCACATCAGTCCTATGTCATTTTGCTCATTGTCTGCTAATAGTCAA  100
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  TTTTTCACATCAGTCCTATGTCA-TTTGCTCA-TGTCTGCTAATAGTCAA  96

seq1  AGTGCATGAGTTAGTTTTAGTTGTCTTTTCTAGTCTAGATCTTTGCAGAC  150
      |||||||||| ||| ||||| |||||||||||||||||||||||||||||
seq2  AGTGCATGAG-TAG-TTTAG-TGTCTTTTCTAGTCTAGATCTTTGCAGAC  143

seq1  CCTCTTTTTCTTTTCGTAGCTTTTTATTTGTCTTCACAGTTTGCTAGAAA  200
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCTCTTTTTCTTTTCGTAGC-TTTTATTTGTCTTCACAGTTTGCTAGAAA  192

seq1  AATCTAGACTTATATAAGTTATATCTAGGAATAATCTGCATTTTCAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAGACTTATATAAGTTATATCTAGGAATAATCTGCATTTTCAGTTG  242

seq1  TGCACTGCTCTCTAGGGAAGAGAATAACACTAAATGTTGTGAGTTTTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGCTCTCTAGGGAAGAGAATAACACTAAATGTTGTGAGTTTTCAG  292

seq1  TGACATTGTTCTACTTAACTGAAGTTGGGTACTCTATACCCTGACTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTGTTCTACTTAACTGAAGTTGGGTACTCTATACCCTGACTAAAA  342

seq1  TCCAGATGTTTCTGAGGAAAATAACAGTCCTGACTTACTTATCTCCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATGTTTCTGAGGAAAATAACAGTCCTGACTTACTTATCTCCTTCT  392

seq1  ACAGATGTTTGCCCCTTATATGGATAGCTTAGGGTATTGTTGTTGTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGTTTGCCCCTTATATGGATAGCTTAGGGTATTGTTGTTGTTGTT  442

seq1  TATCCCTTTTCTTTCTTTTAAAATAAATTATTGTATTTATTTGCATCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTTTTCTTTCTTTTAAAATAAATTATTGTATTTATTTGCATCCCA  492

seq1  AATGTTGCCTCCCTCACAGATTTCTTCTCCTCTCTCCTTCCTGCTCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGCCTCCCTCACAGATTTCTTCTCCTCTCTCCTTCCTGCTCTTCC  542

seq1  ACCTTCCGTTTTTATCTGAGAGGCTGCTTCCCCATATTTTAAGAATCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCGTTTTTATCTGAGAGGCTGCTTCCCCATATTTTAAGAATCTTC  592

seq1  AAAGAGGTCTCTAGGTGGATGTGGTGAAATTTTCCTCAAAATCTTTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGTCTCTAGGTGGATGTGGTGAAATTTTCCTCAAAATCTTTTCTT  642

seq1  TATAGATATTGTGCCCAGAAGTCAGCTTCCTACTCCATTATTGTAAATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATATTGTGCCCAGAAGTCAGCTTCCTACTCCATTATTGTAAATTG  692

seq1  ATTGTTTACATATGTGCAAAGGATGTTAACAGTTTTACTGGCATCTGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTACATATGTGCAAAGGATGTTAACAGTTTTACTGGCATCTGTTG  742

seq1  TAATGGTCTGAAAAAAAATGAATAAATTCTCTTAAGGGGTATGACTCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTCTGAAAAAAAATGAATAAATTCTCTTAAGGGGTATGACTCCTG  792

seq1  GTTAATACTTATGCATGATATTTTAGGCCTTACCATACACAATTACACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATACTTATGCATGATATTTTAGGCCTTACCATACACAATTACACAC  842

seq1  ACTGAATCTGAAGCACAAAGAATCTAGATAAATTTTAGGAACTCTACAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATCTGAAGCACAAAGAATCTAGATAAATTTTAGGAACTCTACAAG  892

seq1  ACATCTCAGTCAGAAGCTCTGCAGTGGCGTCTGAGGATGTGCTTCAGTGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTCAGTCAGAAGCTCTGCAGTGGCGTCTGAGGATGTGCTTCAGTGC  942

seq1  TTGAAGAACCTTTGTGACACTCTCACTAATTGTCTTGCTGTACAACACCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAACCTTTGTGACACTCTCACTAATTGTCTTGCTGTACAACACCC  992

seq1  ACATAGGTAAGTCCCTAGAGCTATTTGAAATGATGAAGTGAACCCTCCTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGTAAGTCCCTAGAGCTATTTGAAATGATGAAGTGAACCCTCCTA  1042

seq1  GATGTCAATTTATCTACTTGGGATTGTCTCTAAGAAAAAATGAATTC  1097
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAATTTATCTACTTGGGATTGTCTCTAAGAAAAAATGAATTC  1089