BAC Information

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BAC

Clone NameB6Ng01-084G05
Chromosome1 (Build37)
Map Location 121,924,101 - 122,061,480
singlet/doubletdoublet
Overlap geneSctr, Tmem37, Dbi, 3110009E18Rik
Upstream geneGli2, LOC666838, LOC100041778, Inhbb, Ralb, Tmem185b, Epb4.1l5, Ptpn4, LOC100042447, LOC666870, LOC100041863, Tmem177, Gm101
Downstream geneSteap3, C1ql2, Marco, En1, AI848258
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084G05.bB6Ng01-084G05.g
ACCDH898364DH898365
length937946
definitionDH898364|Mus musculus domesticus DNA, BAC clone: B6Ng01-084G05, 5' end.DH898365|Mus musculus domesticus DNA, BAC clone: B6Ng01-084G05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,060,534 - 122,061,480)(121,924,101 - 121,925,046)
sequence
gaattcacatactctgcttacctgatttcgagaaagcaaggctggcgaag
cagcacactctaggaccctgctggtctctacctcctcactgctacatctc
cagagcccactaccaggctgggctttcacatgggtgcctcagacaggcaa
agcaagctccttaccaaatgggttattgtttaatgcaaaacatattcttt
agacttattcattttctattatatgagtgttttggctgcatggatgtata
tataccatgtttgagcctggtgtcatcaaaagtctgaagaagacattcag
tctccatggaactgtgtcaaggatggctgtgagcaaccacatctgtgccg
ggagctgaacctgggtcgtcctccccaccccacccacccccaccccaccc
ccggcacaagcagcaagtactctgactgctgagaattatctccaaccctc
ctgtgaaacaaatgctccagtgtgctcagccaggccgtactagtaagcta
cagtttttaaaactcgggtcaaacgtgttttgagcagacattttcaccag
atttttctcttcaataaaattagcaaaaccaaagaaagcaaagaaaaata
ccaaagaaagcaaagaaaaatgtcccttcttctacagtaacatcatctgt
catcctcacttggggtgatctgtttgctttttgcttttgcctggttttga
tttttgtttgtttgagacaggtctcagtttccccggggctggtattgaac
ttgctctgcagccaaggctagtcttgagttcccgattctcttgcttctag
ctccccaagtgctgggattacagacatgtttattttgactcctttaaaag
aaaaatccccccaaccactttattacaaaacatctttcctactaaaactt
cttgagcagtgcattttcttaacactcacttatgggg
gaattcataggtctgctctcagccctcagtgctcagaggatggagctgaa
ctgggcaaataagagcacctgtggatgttcagtaactgcagggttgagaa
ccagttcaattgatatggagggcagcctgggaggtgacccttcactgggt
tgaggagacaggaaggctgtaacgggaccccagcttcatccccttcctgc
atttgtctctctgcccctggactcctccattcttcctctaagcatgggcc
gttgactccctgtcacacctaggctgttgcaatagtcactttcagaatgt
ctgcttcttatagctcaggcctggcatagttccacccctgcccagggcct
ggctgacatgagaagtgtggcattgagccagctggcaggggtttctccta
cccgggggcacctttaccatgctccagccagccctaggttagctgttctg
tggaccctgctcaacgtaactccccacacccaagactctcagacactctg
acacctcattctgtctggccaggcagtcaaggtcacctaccacatggact
ggagcctttggctagtggcctggtggcttggccagccccagacagctctg
agtcccacttctcaggtggccaatagtctctggaagtggtcatctgcccc
cagtactggagaaaacatggaatagacaaggagaccattctgcagtcaca
cggagagagacctgctttaaggaagggggaacacctgtttctctttgacc
tcctaggactccaaatgctagaaacaggaagtagtgttttctggaaggcc
ccccccccaggaccagtcacacctgttttattatttctcaccactgtgac
aagatcagtttaagaaagggcggggttggtttgggctcacagtttgaggg
agcagtccgcagtccatcgtggtaggcacagcaccagggagtcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_122060534_122061480
seq2: B6Ng01-084G05.b_47_983 (reverse)

seq1  CCCCATAAGTGTGTGTTTATGAAATTGCACTGCTCAAGGAAGTTTTAGTA  50
      ||||||||||| ||| ||| |||| |||||||||||| ||||||||||| 
seq2  CCCCATAAGTGAGTG-TTAAGAAAATGCACTGCTCAA-GAAGTTTTAGT-  47

seq1  AGGAAAGATGTTTTTGTTAATAAGGTGGTTTGGGGGGATTTTTTCTTTTT  100
      ||||||||||||||   |||||| |||| ||||||||||||||   ||||
seq2  AGGAAAGATGTTTT--GTAATAAAGTGG-TTGGGGGGATTTTT--CTTTT  92

seq1  AAAGGAGTCAAAATAAACATGTCTGTAATCCCAGCACTTGGGGAGCTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGTCAAAATAAACATGTCTGTAATCCCAGCACTTGGGGAGCTAGA  142

seq1  AGCAAGAGAATCGGGAACTCAAGACTAGCCTTGGCTGCAGAGCAAGTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAGAATCGGGAACTCAAGACTAGCCTTGGCTGCAGAGCAAGTTCA  192

seq1  AAACCAGCCCCGGGGAAACTGAGACCTGTCTCAAACAAACAAAAATCAAA  250
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGCCCCGGGGAAACTGAGACCTGTCTCAAACAAACAAAAATCAAA  242

seq1  ACCAGGCAAAAGCAAAAAGCAAACAGATCACCCCAAGTGAGGATGACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCAAAAGCAAAAAGCAAACAGATCACCCCAAGTGAGGATGACAGA  292

seq1  TGATGTTACTGTAGAAGAAGGGACATTTTTCTTTGCTTTCTTTGGTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTACTGTAGAAGAAGGGACATTTTTCTTTGCTTTCTTTGGTATTT  342

seq1  TTCTTTGCTTTCTTTGGTTTTGCTAATTTTATTGAAGAGAAAAATCTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGCTTTCTTTGGTTTTGCTAATTTTATTGAAGAGAAAAATCTGGT  392

seq1  GAAAATGTCTGCTCAAAACACGTTTGACCCGAGTTTTAAAAACTGTAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTCTGCTCAAAACACGTTTGACCCGAGTTTTAAAAACTGTAGCT  442

seq1  TACTAGTACGGCCTGGCTGAGCACACTGGAGCATTTGTTTCACAGGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTACGGCCTGGCTGAGCACACTGGAGCATTTGTTTCACAGGAGGG  492

seq1  TTGGAGATAATTCTCAGCAGTCAGAGTACTTGCTGCTTGTGCCGGGGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGATAATTCTCAGCAGTCAGAGTACTTGCTGCTTGTGCCGGGGGTG  542

seq1  GGGTGGGGGTGGGTGGGGTGGGGAGGACGACCCAGGTTCAGCTCCCGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGGGTGGGTGGGGTGGGGAGGACGACCCAGGTTCAGCTCCCGGCA  592

seq1  CAGATGTGGTTGCTCACAGCCATCCTTGACACAGTTCCATGGAGACTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGGTTGCTCACAGCCATCCTTGACACAGTTCCATGGAGACTGAA  642

seq1  TGTCTTCTTCAGACTTTTGATGACACCAGGCTCAAACATGGTATATATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTTCAGACTTTTGATGACACCAGGCTCAAACATGGTATATATAC  692

seq1  ATCCATGCAGCCAAAACACTCATATAATAGAAAATGAATAAGTCTAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGCAGCCAAAACACTCATATAATAGAAAATGAATAAGTCTAAAGA  742

seq1  ATATGTTTTGCATTAAACAATAACCCATTTGGTAAGGAGCTTGCTTTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTTTGCATTAAACAATAACCCATTTGGTAAGGAGCTTGCTTTGCC  792

seq1  TGTCTGAGGCACCCATGTGAAAGCCCAGCCTGGTAGTGGGCTCTGGAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAGGCACCCATGTGAAAGCCCAGCCTGGTAGTGGGCTCTGGAGAT  842

seq1  GTAGCAGTGAGGAGGTAGAGACCAGCAGGGTCCTAGAGTGTGCTGCTTCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGTGAGGAGGTAGAGACCAGCAGGGTCCTAGAGTGTGCTGCTTCG  892

seq1  CCAGCCTTGCTTACTCGGAGGATCAGGTAAGCAGAGTATGTGAATTC  947
      |||||||||||| |||| |  ||||||||||||||||||||||||||
seq2  CCAGCCTTGCTTTCTCGAA--ATCAGGTAAGCAGAGTATGTGAATTC  937

seq1: chr1_121924101_121925046
seq2: B6Ng01-084G05.g_70_1015

seq1  GAATTCATAGGTCTGCTCTCAGCCCTCAGTGCTCAGAGGATGGAGCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGGTCTGCTCTCAGCCCTCAGTGCTCAGAGGATGGAGCTGAA  50

seq1  CTGGGCAAATAAGAGCACCTGTGGATGTTCAGTAACTGCAGGGTTGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAAATAAGAGCACCTGTGGATGTTCAGTAACTGCAGGGTTGAGAA  100

seq1  CCAGTTCAATTGATATGGAGGGCAGCCTGGGAGGTGACCCTTCACTGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCAATTGATATGGAGGGCAGCCTGGGAGGTGACCCTTCACTGGGT  150

seq1  TGAGGAGACAGGAAGGCTGTAACGGGACCCCAGCTTCATCCCCTTCCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGACAGGAAGGCTGTAACGGGACCCCAGCTTCATCCCCTTCCTGC  200

seq1  ATTTGTCTCTCTGCCCCTGGACTCCTCCATTCTTCCTCTAAGCATGGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTCTCTGCCCCTGGACTCCTCCATTCTTCCTCTAAGCATGGGCC  250

seq1  GTTGACTCCCTGTCACACCTAGGCTGTTGCAATAGTCACTTTCAGAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTCCCTGTCACACCTAGGCTGTTGCAATAGTCACTTTCAGAATGT  300

seq1  CTGCTTCTTATAGCTCAGGCCTGGCATAGTTCCACCCCTGCCCAGGGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTTATAGCTCAGGCCTGGCATAGTTCCACCCCTGCCCAGGGCCT  350

seq1  GGCTGACATGAGAAGTGTGGCATTGAGCCAGCTGGCAGGGGTTTCTCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGACATGAGAAGTGTGGCATTGAGCCAGCTGGCAGGGGTTTCTCCTA  400

seq1  CCCGGGGGCACCTTTACCATGCTCCAGCCAGCCCTAGGTTAGCTGTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGGGCACCTTTACCATGCTCCAGCCAGCCCTAGGTTAGCTGTTCTG  450

seq1  TGGACCCTGCTCAACGTAACTCCCCACACCCAAGACTCTCAGACACTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCCTGCTCAACGTAACTCCCCACACCCAAGACTCTCAGACACTCTG  500

seq1  ACACCTCATTCTGTCTGGCCAGGCAGTCAAGGTCACCTACCACATGGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTCATTCTGTCTGGCCAGGCAGTCAAGGTCACCTACCACATGGACT  550

seq1  GGAGCCTTTGGCTAGTGGCCTGGTGGCTTGGCCAGCCCCAGACAGCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTTTGGCTAGTGGCCTGGTGGCTTGGCCAGCCCCAGACAGCTCTG  600

seq1  AGTCCCACTTCTCAGGTGGCCAATAGTCTCTGGAAGTGGTCATCTGCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCACTTCTCAGGTGGCCAATAGTCTCTGGAAGTGGTCATCTGCCCC  650

seq1  CAGTACTGGAGAAAACATGGAATAGACAAGGAGACCATTCTGCAGTCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACTGGAGAAAACATGGAATAGACAAGGAGACCATTCTGCAGTCACA  700

seq1  CGGAGAGAGACCTGC-TTAAGGAAGGGGGAACACCTGTTTCTCTTTGACC  749
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CGGAGAGAGACCTGCTTTAAGGAAGGGGGAACACCTGTTTCTCTTTGACC  750

seq1  TCCTAGGACTCCAAATGCTAGAAACAGGAAGTAGTGTTTTCTGGAAGGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGACTCCAAATGCTAGAAACAGGAAGTAGTGTTTTCTGGAAGGCC  800

seq1  CCCCCCCCAGGACCAAGTCACACCTGTTTTATTATTTTCTCACCACTGTG  849
      |||||||||||||| ||||||||||||||||||| |||||||||||||||
seq2  CCCCCCCCAGGACC-AGTCACACCTGTTTTATTA-TTTCTCACCACTGTG  848

seq1  ACAAGATCAGTTTAAGAAAGGGCGGGGTTGGTTTGGGCTCACAGTTTGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATCAGTTTAAGAAAGGGCGGGGTTGGTTTGGGCTCACAGTTTGAG  898

seq1  GGAGCAGTCCGCAGTCCATCGTGGCAGGCACAGCACCA-GGAGTCAGC  946
      |||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  GGAGCAGTCCGCAGTCCATCGTGGTAGGCACAGCACCAGGGAGTCAGC  946