BAC Information

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BAC

Clone NameB6Ng01-084P18
Chromosome1 (Build37)
Map Location 116,653,824 - 116,654,985
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC227506, Cntnap5a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084P18.bB6Ng01-084P18.g
ACCDH898782DH898783
length1,1441,185
definitionDH898782|Mus musculus domesticus DNA, BAC clone: B6Ng01-084P18, 5' end.DH898783|Mus musculus domesticus DNA, BAC clone: B6Ng01-084P18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtataagactacttaattgttactacatgttatttcgtacta
ctgaattataaaggagcatgctgagattctaacataattaatgacttagc
taagatccagtaaaaacctttgaacttaaatgaccctttctctctagtat
acacttaaatattgtttttgtgtgcttttttgttttgtgatagatatata
gacagtctgtgttaggaagaaaaatatagttgtaagggtggaagtaggat
cttgagtaggacaaaacagctcttttaaagcttgtaaggcacgtgtttga
tatatatttttgctactatactgttgtttgctataaaacattttattttc
ttccagtgaaagaagtaatggaactctggttgtagtaacacactaggtgt
atagctgctatttttatgacattaataaacaatatgaatgcaatagtaag
ttatgtcatgaagactggattcaacttgacaatgaagaatcaaagcatat
attataaaacaaaacaaaacaaaacaaaacaaaacaaaacaatagactga
aacacagctcatcggagaggtgtttcctgctgagactgatgacctggctg
tgtccttattgcatatgtgagggaaagaaagactgacacctgcaggttgt
cttctgaactctacatgtattctatagacagacagtgactacatttagag
aaagaaggatatgacatattgaaaacaattcacacaataaatgatgtgag
catatttagctgggattgaccagttgaaaaagctttcacaggcttcttct
caaaagacgcagccctaacttctgccaaacatagtaccaccaagatgccc
ttagtatgtaagaatcatttcaaaatcccctttaataaagtctttagtgg
taaaatatcttctgtttttctaattcctaaactgagatgaaaattttcat
ttcaaatttctgattcaaacttgctcccttttctttacttttaaaaatat
agtttacatgtatgatgttttttcccacatgttgtagatgcatcatgttt
gcatgactaagctgggatcatatctgcagctgatgtagatatttgtgagc
atgttgggtgctgggaagaattcttcttcccagagcagtgagca
gaattctaggaagtcttaatatcattttttttatttcttcactaacacag
attaaacagagtcagtgtccgttattatgtattctgttgtttttgtttgt
ttgtttggtttttttttttattgttgaaattcagcttcaatccacagtga
tctgatgagattattggggttatttcaatattcttacatattttaaaggc
tttatttgtgaactggtcatatgtttgtttgttttgttgtttcttttgag
tatgaagtgtccttccctatctcctatgatttattttaattgaaactgtt
ttttctttattttctatttctattttgtttatttacatttaaaatattat
cccctttcccagtttccctccttcctgggaacaccttatcacatcctccc
tgcccccgcttctatgagggtgttcttccactcaccctcccactccctta
attcccctatactagggcatctattgagccttcaaaggaccaaggacctc
tccttccattgattcacaataaggacatcctctgctacatatggaactgg
agccatgtgtacttctttgttgatggcttagtccctgggagttctggggg
gtctggttggttgatattgttattcttcctatggggttgcaaatgtcttc
aactctgtcggtccttttctattagggaccccacattcagttcaatggtt
ggttggctgctaacatctgcctctgtatttgtaaggctctggaagggcct
ctcacgagacagccatatgaaattctattgtagcagatattataattgct
tctgaagcttatttcttgagtcgtttttcataatgtctcaaatttcctgg
atttttgtgtcatgaattttcagaatttattttctttgactgacattcca
ctttattctatggtatcttttatgtctgagttttttttttctctctcatc
tctattttctgtgagaaatgctaaggctgtattttctgttaactttctag
gctgtccattagaagattcctcagtttctgttttcctgtacctttaatcc
tgtttagggtcttccgacgtttaattcctactacgtggattttaattccc
ctattctttgatgtacgacgctcgccttttaaccaacggtgacatttcgt
attctagagattatcatttcctatactcgtgggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_116653824_116654985
seq2: B6Ng01-084P18.b_46_1189

seq1  GAATTCCTGTATAAGACTACTTAATTGTTACTACATGTTATTTCGTACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTATAAGACTACTTAATTGTTACTACATGTTATTTCGTACTA  50

seq1  CTGAATTATAAAGGAGCATGCTGAGATTCTAACATAATTAATGACTTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTATAAAGGAGCATGCTGAGATTCTAACATAATTAATGACTTAGC  100

seq1  TAAGATCCAGTAAAAACCTTTGAACTTAAATGACCCTTTCTCTCTAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCCAGTAAAAACCTTTGAACTTAAATGACCCTTTCTCTCTAGTAT  150

seq1  ACACTTAAATATTGTTTTTGTGTGCTTTTTTGTTTTGTGATAGATATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTAAATATTGTTTTTGTGTGCTTTTTTGTTTTGTGATAGATATATA  200

seq1  GACAGTCTGTGTTAGGAAGAAAAATATAGTTGTAAGGGTGGAAGTAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCTGTGTTAGGAAGAAAAATATAGTTGTAAGGGTGGAAGTAGGAT  250

seq1  CTTGAGTAGGACAAAACAGCTCTTTTAAAGCTTGTAAGGCACGTGTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTAGGACAAAACAGCTCTTTTAAAGCTTGTAAGGCACGTGTTTGA  300

seq1  TATATATTTTTGCTACTATACTGTTGTTTGCTATAAAACATTTTATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTTTTGCTACTATACTGTTGTTTGCTATAAAACATTTTATTTTC  350

seq1  TTCCAGTGAAAGAAGTAATGGAACTCTGGTTGTAGTAACACACTAGGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTGAAAGAAGTAATGGAACTCTGGTTGTAGTAACACACTAGGTGT  400

seq1  ATAGCTGCTATTTTTATGACATTAATAAACAATATGAATGCAATAGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGCTATTTTTATGACATTAATAAACAATATGAATGCAATAGTAAG  450

seq1  TTATGTCATGAAGACTGGATTCAACTTGACAATGAAGAATCAAAGCATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCATGAAGACTGGATTCAACTTGACAATGAAGAATCAAAGCATAT  500

seq1  ATTATAAAACAAAACAAAACAAAACAAAACAAAACAAAACAATAGACTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAAACAAAACAAAACAAAACAAAACAAAACAAAACAATAGACTGA  550

seq1  AACACAGCTCATCGGAGAGGTGTTTCCTGCTGAGACTGATGACCTGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGCTCATCGGAGAGGTGTTTCCTGCTGAGACTGATGACCTGGCTG  600

seq1  TGTCCTTATTGCATATGTGAGGGAAAGAAAGACTGACACCTGCAGGTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTATTGCATATGTGAGGGAAAGAAAGACTGACACCTGCAGGTTGT  650

seq1  CTTCTGAACTCTACATGTATTCTATAGACAGACAGTGACTACATTTAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAACTCTACATGTATTCTATAGACAGACAGTGACTACATTTAGAG  700

seq1  AAAGAAGGATATGACATATTGAAAACAATTCACACAATAAATGATGTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGGATATGACATATTGAAAACAATTCACACAATAAATGATGTGAG  750

seq1  CATATTTAGCTGGGATTGACCAGTTGAAAAAGCTTTCACAGGCTTCTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTAGCTGGGATTGACCAGTTGAAAAAGCTTTCACAGGCTTCTTCT  800

seq1  CAAAAGACGCAGCCCTAACTTCTGCCAAACATAGTACCACCAAGATGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGACGCAGCCCTAACTTCTGCCAAACATAGTACCACCAAGATGCCC  850

seq1  TTAGTATGTAAGAATCATTTCAAAATCCCCTTTAATAAAGTCTTTAGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATGTAAGAATCATTTCAAAATCCCCTTTAATAAAGTCTTTAGTGG  900

seq1  TAAAATATCTTCTGTTTTTCTAATTCCTAAAACTGAGATGAAAATTTTCA  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAAAATATCTTCTGTTTTTCTAATTCCT-AAACTGAGATGAAAATTTTCA  949

seq1  TTTCAAATTTCTGAATTCAAACTTGCTCCCTTTTCTTTACTTTTAAAAAT  1000
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATTTCTG-ATTCAAACTTGCTCCCTTTTCTTTACTTTTAAAAAT  998

seq1  ATAGTTTACATGTATGAGTGTTTTTTCCCACATGTTTGTAGATGCATCAT  1050
      ||||||||||||||||| |||||||||||||||| |||||||||||||||
seq2  ATAGTTTACATGTATGA-TGTTTTTTCCCACATG-TTGTAGATGCATCAT  1046

seq1  GTTTGCATGACCTAAGCTGGGATCATTATCTGCAGCTGGAATTGTAGATA  1100
      |||||||||| |||||||||||||| ||||||||||||    ||||||||
seq2  GTTTGCATGA-CTAAGCTGGGATCA-TATCTGCAGCTG---ATGTAGATA  1091

seq1  TTTGTGAGCAATGTTATGGGTGCTGGGGACAGAATCCCTGTCTTC-TCCA  1149
      ||||||||| ||||  |||||||||||   |||||     ||||| ||| 
seq2  TTTGTGAGC-ATGT--TGGGTGCTGGG--AAGAAT-----TCTTCTTCCC  1131

seq1  AGAGCAGTGAGCA  1162
      |||||||||||||
seq2  AGAGCAGTGAGCA  1144