BAC Information

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BAC

Clone NameB6Ng01-085I20
Chromosome1 (Build37)
Map Location 32,860,624 - 32,992,247
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041238, Khdrbs2, EG408191
Downstream geneEG633498, LOC213711, LOC100040828, EG666108, Prim2, 1700001G17Rik, Rab23, Bag2, Zfp451, OTTMUSG00000022109, B230209C24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085I20.bB6Ng01-085I20.g
ACCDH899196DH899197
length550497
definitionDH899196|Mus musculus domesticus DNA, BAC clone: B6Ng01-085I20, 5' end.DH899197|Mus musculus domesticus DNA, BAC clone: B6Ng01-085I20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,860,624 - 32,861,178)(32,991,745 - 32,992,247)
sequence
tttgatccctaattgattttccccttaagacagtttcccatttcctatac
actatttcaattatacaccaagaagaaagatgtatagctaaaaatgtgaa
tatgttattagaataatccaaattactaaataaaatgtcatatactgtta
tttgacagagagagaacatacactgataatagcaaagattattgtggggt
ttgggttttttttggttttggttttggttttggtttttttgctgttttgt
tttggttttgacaggtgattgcatggttttatctttgtttgccaccaaga
gagtttaggcttttaccttcaggtctgcaaaagatgtctgctgcatcaac
ctatattcaaagtcagaaatagggtagaagcaagtggttatgcaaggtct
gtctgtccctatttttaagctaagtattttctcctatactttgttttaaa
tacttcagctttagatcttattagtcctggagcagaacctgtgttagaat
tctgatctccctgaatatggataatagtatcctacaggctagggtcccac

aagaccaatgagtagaaaacaatatttttttatcaccaggcaagtagcat
gcaattcatgctcagataagggtgaagacttgtttataagcctatattct
agagtctttcccctgcctcactttcaccatcccattaagatgtctgtaca
gaatgctgggatgtgatttctagctcataccaaatgcttccactgagtag
cttctttgttgactgtggagaccttgccgttagacaatctcacaaagtaa
gatagagttgctggaacaagtcaacaagctgtgtcagttttcctctccca
gtgaaccttccagtgggtgtgacaaacccacaacctgcagtttatatatg
cccaagactatctatgaatgcatcccaagagataaccattaccttactta
aaatactaaggaagagatttttgttgttcttatttattttatgttttggt
ttttgctttggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_32860624_32861178
seq2: B6Ng01-085I20.b_42_597

seq1  GAATTCTTTGATCCCTAATTGATTTTCCCCTTAAGACAGTTTCCCATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATCCCTAATTGATTTTCCCCTTAAGACAGTTTCCCATTTC  50

seq1  CTATACACTATTTCAATTATACACCAAGAAGAAAGATGTATAGCTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACACTATTTCAATTATACACCAAGAAGAAAGATGTATAGCTAAAAA  100

seq1  TGTGAATATGTTATTAGAATAATCCAAATTACTAAATAAAATGTCATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATATGTTATTAGAATAATCCAAATTACTAAATAAAATGTCATATA  150

seq1  CTGTTATTTGACAGAGAGAGAACATACACTGATAATAGCAAAGATTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTATTTGACAGAGAGAGAACATACACTGATAATAGCAAAGATTATTG  200

seq1  TGGGGTTTGGGTTTTTTTTGGTTTTGGTTTTGGTTTTGGTTTTTTTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTTGGGTTTTTTTTGGTTTTGGTTTTGGTTTTGGTTTTTTTGCTG  250

seq1  TTTTGTTTTGGTTTTGACAGGTGATTGCATGGTTTTATCTTTGTTTGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGGTTTTGACAGGTGATTGCATGGTTTTATCTTTGTTTGCCA  300

seq1  CCAAGAGAGTTTAGGCTTTTACCTTCAGGTCTGCAAAAGATGTCTGCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGAGTTTAGGCTTTTACCTTCAGGTCTGCAAAAGATGTCTGCTGC  350

seq1  ATCAACCTATATTCAAAGTCAGAAATAGGGTAGAAGCAAGTGGTTATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACCTATATTCAAAGTCAGAAATAGGGTAGAAGCAAGTGGTTATGCA  400

seq1  AGGTCTGTCTGTCCCTATTTTTAAGCTAAGTATTTTCTCCTATACTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGTCTGTCCCTATTTTTAAGCTAAGTATTTTCTCCTATACTTTGT  450

seq1  TTTAAATACTTCAGC-TTAGATCTTATTAGTCCTGGAGCAGAACCTGTGT  499
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTAAATACTTCAGCTTTAGATCTTATTAGTCCTGGAGCAGAACCTGTGT  500

seq1  TAGAATTCTGATCTCCCTGAATATGGATAATAGTATCCTACAGGCTAGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTCTGATCTCCCTGAATATGGATAATAGTATCCTACAGGCTAGGG  550

seq1  TCCCAC  555
      ||||||
seq2  TCCCAC  556

seq1: chr1_32991745_32992247
seq2: B6Ng01-085I20.g_70_572 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACCAAAGCAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACCAAAGCAAAAACC  50

seq1  AAAACATAAAATAAATAAGAACAACAAAAATCTCTTCCTTAGTATTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATAAAATAAATAAGAACAACAAAAATCTCTTCCTTAGTATTTTAA  100

seq1  GTAAGGTAATGGTTTTCTCTTGGGATGCATTCATAGATAGTCTTGGGCAT  150
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTAAGGTAATGGTTATCTCTTGGGATGCATTCATAGATAGTCTTGGGCAT  150

seq1  ATATAAACTGCAGGTTGTGGGTTTGTCACACCCACTGGAAGGTTCACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAACTGCAGGTTGTGGGTTTGTCACACCCACTGGAAGGTTCACTGG  200

seq1  GAGAGGAAAACTGACACAGCTTGTTGACTTGTTCCAGCAACTCTATCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAAAACTGACACAGCTTGTTGACTTGTTCCAGCAACTCTATCTTA  250

seq1  CTTTGTGAGATTGTCTAACGGCAAGGTCTCCACAGTCAACAAAGAAGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGAGATTGTCTAACGGCAAGGTCTCCACAGTCAACAAAGAAGCTA  300

seq1  CTCAGTGGAAGCATTTGGTATGAGCTAGAAATCACATCCCAGCATTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGGAAGCATTTGGTATGAGCTAGAAATCACATCCCAGCATTCTGT  350

seq1  ACAGACATCTTAATGGGATGGTGAAAGTGAGGCAGGGGAAAGACTCTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACATCTTAATGGGATGGTGAAAGTGAGGCAGGGGAAAGACTCTAGA  400

seq1  ATATAGGCTTATAAACAAGTCTTCACCCTTATCTGAGCATGAATTGCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGCTTATAAACAAGTCTTCACCCTTATCTGAGCATGAATTGCATG  450

seq1  CTACTTGCCTGGTGATAAAAAAATATTGTTTTCTACTCATTGGTCTTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTGCCTGGTGATAAAAAAATATTGTTTTCTACTCATTGGTCTTGAA  500

seq1  TTC  503
      |||
seq2  TTC  503