BAC Information

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BAC

Clone NameB6Ng01-086N08
Chromosome1 (Build37)
Map Location 147,841,107 - 147,841,561
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625057, LOC383570
Downstream geneLOC383571, B830045N13Rik, LOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086N08.bB6Ng01-086N08.g
ACCDH900126DH900127
length1,247449
definitionDH900126|Mus musculus domesticus DNA, BAC clone: B6Ng01-086N08, 5' end.DH900127|Mus musculus domesticus DNA, BAC clone: B6Ng01-086N08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttgtgattgggttatctcactcaggatgatgccctcaaggtc
caaccatttgcataggaatttcataaattcattatttttaatagctgagt
agtactccattgtgtaaatgtaccacattttttgtatccattcctctgtt
gaggggcatctgggttctttccagcttcaggctattataaataaggctgc
tatgaacatagtggagcatgtgtccttcttaccggttgggacatcttctg
gatatatacccaggagaggtattgcgggatcctccagtagtactatgtcc
agttttctgaggaactgccagactgctttccagagtggttatacaagctt
gcaatccctccaacaatggaggagtgttcctctttctccacatgcttgcc
agcgtctgctgtaacgtgaatttttgatcttagccattctgactggtgtg
aggttgaatttcagggttgttttgatttgtatttccctgatgattaagga
tgctgaacatttttttcaggagcttctcagccattccgtattcctcaggt
gagaattctctgtttagctctgagccacattttttaatggggttatttga
ttttctggagtccaagttcttgagttctttaaatatattggatattagtc
ccctatctgatttaggataggtaaagatcctttcccaatctgttggtggc
ctttttgtcttattgacggtgtcttttgccttacagaagctttgcagttt
tatgaggtcccatttgtcaattctctatcttacagcacgagccattgctg
ttctattcaggaatttttcccctgtgcccatatcttcgaggcttttcccc
aagatataagatacaatttgcaaaacacatgaaactcaagaaaacgaaga
ccaaagtgtggacactttaccccttcttagaattgggaacaaaacacccg
tggaaggagttacagagataaagtttggagctgagatgaaaggattgacc
atctagagactgccatatcagggtcatcccataatcagcctccaacgctg
atagcattgcatacactaagaagatttgcgaaagaccctgatatagctgt
ctcttgtgagactatgctgagtctgcaaccagagttggatggctccaggt
cagctattgtatgattacaggccccttattcgacttggaaagttcccaag
agctaaggaatctcgggctcactctaaggtgaacacatatatggaac
caggacagccagggctatacagagaaaccctgtctcaaaaaacaaaaaca
aaaacaaaaacaaaaacaaacaaaaaaaaaaacaaaacaaaaaaaaaaaa
gaagaaagaaattgagctttcaggtgaatatgagttttatttctccatgt
acaatgatctatatatgtgatagtttctgacacagggtctttctgaaatt
cgctatatcctataatattcagtaatattctttccctggaactagacttt
gcattggtaactccattaggactagtaaggggattgttacctcatttcag
ataaattttcttttaacttttcctgtttatgtctatctaattctctatct
ctttctgtgactgtctgtctgtcttctgtctgcctctctctctctctctg
tatatatatatatatatatatatatatatatatatatatatatatatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_147841107_147841561
seq2: B6Ng01-086N08.g_68_522 (reverse)

seq1  ACATATATATATATATATATATATATATATATATATATATATATATATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATATATATATATATATATATATATATATATATATATATATATAC  50

seq1  AGAGAGAGAGAGAGAGGCAGACAGAAGACAGACAGACAGTCACAGAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGGCAGACAGAAGACAGACAGACAGTCACAGAAAGA  100

seq1  GATAGAGAATTAGATAGACATAAACAGGAAAAGTTAAAAGAAAATTTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAGAATTAGATAGACATAAACAGGAAAAGTTAAAAGAAAATTTATC  150

seq1  TGAAATGAGGTAACAATCCCCTTACTAGTCCTAATGGAGTTACCAATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGAGGTAACAATCCCCTTACTAGTCCTAATGGAGTTACCAATGCA  200

seq1  AAGTCTAGTTCCAGGGAAAGAATATTACTGAATATTATAGGATATAGCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAGTTCCAGGGAAAGAATATTACTGAATATTATAGGATATAGCGA  250

seq1  ATTTCAGAAAGACCCTGTGTCAGAAACTATCACATATATAGATCATTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGAAAGACCCTGTGTCAGAAACTATCACATATATAGATCATTGTA  300

seq1  CATGGAGAAATAAAACTCATATTCACCTGAAAGCTCAATTTCTTTCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGAAATAAAACTCATATTCACCTGAAAGCTCAATTTCTTTCTTCT  350

seq1  TTTTTTTTTTTGTTTTGTTTTTTTTTTTGTTTGTTTTTGTTTTTGTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTGTTTTGTTTTTTTTTTTGTTTGTTTTTGTTTTTGTTTTT  400

seq1  GTTTTTGTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGG  450

seq1  AATTC  455
      |||||
seq2  AATTC  455