BAC Information

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BAC

Clone NameB6Ng01-086N10
Chromosome1 (Build37)
Map Location 175,887,146 - 175,887,322
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr16, GA_x5J8B7W5Q1F-395172-396104, Olfr1408, GA_x5J8B7W5Q1F-344462-343889, Olfr1406, Olfr218, Olfr1405-ps1, Olfr1404, Fcer1a, Olfr1403, Darc, Cadm3, Aim2, EG240921, BC094916, LOC623121, AI447904, E430029J22Rik, LOC665972, AI607873, Ifi204, EG666028, LOC100040462, Mnda, Ifi203
Downstream geneIfi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2, Grem2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086N10.bB6Ng01-086N10.g
ACCDH900130DH900131
length1,281950
definitionDH900130|Mus musculus domesticus DNA, BAC clone: B6Ng01-086N10, 5' end.DH900131|Mus musculus domesticus DNA, BAC clone: B6Ng01-086N10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaagttagactccaaagaaacaaatattcctattaaaaaaat
gggtacagagctaaacaaagaatcctcaactgaggaatactaaatggcta
agaagcaccgaaaaaaaatgttcaacatcctttgtcatcaagaaaatgca
aataaaaacaaacctgatattccaccttacaccagtcagaatgactaaga
tcaaatacttgggtcacagcagatgttggtaaggatgtttagacagtggt
acactcctccattgctggtgggattacaagctggtacaaccactttcgaa
aacattctgatggttcctcagaaaattggacttactgctacctggggacc
cagcaataccactcctgggcatgtgcccagaagatgctgcaacatataat
aaggacacatgctccactatattaatcgcagccttatttataatagccag
aagctggaaagagcccagatgtccctcaacagagtaatggatagagaaaa
cgaggtacatttacaaaatgtagtattactcagctattaaaaacaatgaa
tttatgatattctcaggcaaatggatggatatggaggatatcatcttgac
tcaggtaacccaataagaaaataatacacatgtcatgcacgcactgataa
gtggatattagaacagaaacacagaagctcagaatacccaaaatacaatt
cacaaaccacatgaaactcaagaagaaggaagaccatagtgtggatactt
ccattcatcttagaatgggggaacaaaacacctgtggaaggagttacaga
gacaaagtgtgtaatagagactgaagaaataaccatccagagactgaacc
acctgtgggtccattccatatacaatcaccaaacccagacactgttgtgg
atgccagcaagtgcttgctgatagaaacctgatatagctttccttaagat
gctctgccagagcctgacaaatacacccactccagtagagtctgaatgag
aagtccaaaagcttggctgcagtcctgaggcacaaagtttcatggaaact
ggtctcttgaagtctttggtgttcttgtaaattggaagtgttccaatttg
tccttgcatatgtgggaggtcttgcatgccttctttcagaaattgtttat
tataaattgactgccaaggatgattgaacagtagctaagttaatattcga
ggaatgctctgcctcactgggtgtcccgaattcttagccatgtgtgagcc
actttgggcgttgaattccaaataagttatc
gaattcctgatctctccaagacttttatcatgaatggatgttggattttg
ttaaatgctttctcagcatctaatgagataaccatgtggattttgtcttt
gagtttgtttataaagcaggttacattggtggatttctatatattaaacc
atcactgcatccctgggatgaagcctacttgatcatgatggatgatcatt
ttgatgtgttgttggattcagtttgcaggaattttattgagtaattttgc
attgatatccataagggaaattggtatggagttctctttctttgttgtgt
ctttgtgtggtttaggaatcagagtaactgtggcttctagaatgaactgg
gtagagtaatttctgtttctattttgtgcaatggtttgaggtatatttga
attaggtcttctttgaagttctgatagaacactgcactaaaccaatctgg
ttctgggctttttttggttgggagattattaatgactatttctatttttt
ttaggagatatgggactgattagatcattaatcttatcctgatttaattt
tggtacctggtgtctgtctagaaaactgtccattgcatctagtttttcca
ggtgtgttgactataggcttttgtagtaggatctggtgattctttcgatt
tcctcatgttctgttgttgtctccattttcatttctaattttgttaatta
ggatactgccttgtgccctctaggtcttctggttaagggtttatatatct
taccgattttttcaaaggaccagctcctggtttggatgattctttgtgta
gttaattttgtttctatttggttgattttagcgctgagtttgattatttc
ctgccctctgctcctcttgggtggttttgctttcttttgtttagaccatt
tatgtgtgctgtcagctgcttgtctgtgctctctccagattcttttggaa

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_175887146_175887322
seq2: B6Ng01-086N10.g_67_243 (reverse)

seq1  TAGGTTTCATCCCAGGGATGCAGGGATGGTTCAATATACGGAAATCCATC  50
      |||| |||||||||||||||||| ||||||| ||||||  |||||||| |
seq2  TAGGCTTCATCCCAGGGATGCAGTGATGGTTTAATATATAGAAATCCACC  50

seq1  AACGTAACCCAGTATATAAACAAACTCAAAGACAAAAACCACATGATCAT  100
      || ||||||   | ||||||||||||||||||||||| ||||||| | ||
seq2  AATGTAACCTGCTTTATAAACAAACTCAAAGACAAAATCCACATGGTTAT  100

seq1  CTCATTAGATGCTGAGAAAGCATTTGACAAAATCCAACACCCATTCATGA  150
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  CTCATTAGATGCTGAGAAAGCATTTAACAAAATCCAACATCCATTCATGA  150

seq1  TAAAAGTCTTGGAAAGATCAGGAATTC  177
      ||||||||||||| |||||||||||||
seq2  TAAAAGTCTTGGAGAGATCAGGAATTC  177