BAC Information

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BAC

Clone NameB6Ng01-087B11
Chromosome1 (Build37)
Map Location 155,754,419 - 155,885,270
singlet/doubletdoublet
Overlap geneGlul, LOC100043359
Upstream geneEG668097, Nmnat2, Lamc2, Lamc1, EG667795, EG626058, 1700012A16Rik, Dhx9, Npl, LOC626096, Rgs8, Rgs16, Rnasel, LOC100043347, Rgsl1, 5830403L16Rik, EG433365, Teddm1, LOC100043357
Downstream geneCacna1e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087B11.bB6Ng01-087B11.g
ACCDH900315DH900316
length8771,080
definitionDH900315|Mus musculus domesticus DNA, BAC clone: B6Ng01-087B11, 5' end.DH900316|Mus musculus domesticus DNA, BAC clone: B6Ng01-087B11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,884,394 - 155,885,270)(155,754,419 - 155,755,508)
sequence
gaattcccaaagaattagagaactaatcagaggttgtttttttttaagtc
caattcaaaggtcatgtaatatataattctatttttgtcatttttttgaa
acaataaatttgtagaaacaaagaacagattagtaaattccctagatcaa
gaactgagggttagagtcttttaaaagtcaacatggaggttagagagaca
gctcggtggttaagagttcttctagaagaactaaattcagttctctgttt
cttgtggttgtagatgacactgaaattaactcaaaatggagaaagtttta
attttgcgctgtggaatggaagataaaggtaaaagattgaaaggacattg
gacaatctggttcacaggaaagactcatcctgatgaagaattcagacaca
ttgaccattcagagctttagatccaagagaagaggaattgccttgactct
attatgttcctgagtttgaccggaagaggttccttggcctgcagagttca
aggtcatccttgaataaactggagacactctcaaaaatgcaagcaaaaga
aagaaaagaagaaaagaaaaattacccaggtatgatggtgcacaccttta
acccatgtccacaataaacctgcttcaccaccgcgctgacaccataggct
ggccccaggcccctcatacagctaaggaaaacattgccagctcctcactc
atgttcaaggtagggagaggatgagcagagagaaaggcccaggccctttg
tttgttctgacagctctgagagggaaaactgggaggttcacccatggaga
agcatggggtgcccagctggggaactctggctttaacctcctcttctgat
ggaaaatgtgttgttttatggtgtgtg
gaattccagataggaccctgtgaggggatccgaatgggagatcatctttg
gatagcccgttttatcttgcatcgggtgtgcgaagactttggggtgatag
caacctttgaccccaagcccattccagggaactggaatggtgcaggctgc
cataccaacttcagcaccaaggccatgcgggaggagaatggtctgaagta
agtaccttcctttggagccgtctgtattctcatggggtagaagggctttg
ggtactcacaaggctgtacgtacatgcctagctctgcatatttgttctaa
gcctgtcagtttgtgcctgttggagaggcgatagggtaaatactttagga
atagaattgacagaaaagcattcgaactaagtaaaaatacaagcaaatgg
gaaacttaattcttactggtgggaagaggcgagtgattgggggtctttcc
atccagtggataatttgcactgcatgttaaagactggcctgagggagaca
gtgccttctttcttctgggattcatgcccgctcccatccttgtcgatgga
ccctcatcttcactgtttccactaggtgcattgaggaggccattgacaaa
ctgagcaagaggcaccagtaccacattcgcgcctacgatcccaagggggg
cctggacaacgcccggcgtctgactggattccacgaaacctccaacatca
acgacttttctgccggtgttgccaaccgcggtgccagtatccgcattccc
cggactgtcggccaggagaagaagggctactttgaagaccgtcggccttc
tgccaattgtgacccctatgcggtgacagaagccatcgtccgcacgtgtc
tcctcaacgaaacaggcgacgaactcttccaatacagaactaagtggact
agacttccagtgatccctctcccagctcttccctttcccagttgtcccca
ctgtaactcaaaagatggaataccaaggtcttttattctcgtgcccagtt
aatcttgctttgttggtcagaatagagggtcagtctaatctctaccacac
accctttctttcctatctagctttctagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_155884394_155885270
seq2: B6Ng01-087B11.b_47_923 (reverse)

seq1  CACACACCATAAACAAACACATTTTCCATCAGAAGAGGAGGTTAAAGCCA  50
      |||||||||||||  |||||||||||||||||||||||||||||||||||
seq2  CACACACCATAAAACAACACATTTTCCATCAGAAGAGGAGGTTAAAGCCA  50

seq1  GAGTTCCCCAGCTGGGCACCCCATGCTTCTCCATGGGTGAACCTCCCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCCCAGCTGGGCACCCCATGCTTCTCCATGGGTGAACCTCCCAGT  100

seq1  TTTCCCTCTCAGAGCTGTCAGAACAAACAAAGGGCCTGGGCCTTTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTCTCAGAGCTGTCAGAACAAACAAAGGGCCTGGGCCTTTCTCTC  150

seq1  TGCTCATCCTCTCCCTACCTTGAACATGAGTGAGGAGCTGGCAATGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATCCTCTCCCTACCTTGAACATGAGTGAGGAGCTGGCAATGTTTT  200

seq1  CCTTAGCTGTATGAGGGGCCTGGGGCCAGCCTATGGTGTCAGCGCGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGCTGTATGAGGGGCCTGGGGCCAGCCTATGGTGTCAGCGCGGTGG  250

seq1  TGAAGCAGGTTTATTGTGGACATGGGTTAAAGGTGTGCACCATCATACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAGGTTTATTGTGGACATGGGTTAAAGGTGTGCACCATCATACCT  300

seq1  GGGTAATTTTTCTTTTCTTCTTTTCTTTCTTTTGCTTGCATTTTTGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAATTTTTCTTTTCTTCTTTTCTTTCTTTTGCTTGCATTTTTGAGAG  350

seq1  TGTCTCCAGTTTATTCAAGGATGACCTTGAACTCTGCAGGCCAAGGAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCAGTTTATTCAAGGATGACCTTGAACTCTGCAGGCCAAGGAACC  400

seq1  TCTTCCGGTCAAACTCAGGAACATAATAGAGTCAAGGCAATTCCTCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCGGTCAAACTCAGGAACATAATAGAGTCAAGGCAATTCCTCTTCT  450

seq1  CTTGGATCTAAAGCTCTGAATGGTCAATGTGTCTGAATTCTTCATCAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATCTAAAGCTCTGAATGGTCAATGTGTCTGAATTCTTCATCAGGA  500

seq1  TGAGTCTTTCCTGTGAACCAGATTGTCCAATGTCCTTTCAATCTTTTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTTTCCTGTGAACCAGATTGTCCAATGTCCTTTCAATCTTTTACC  550

seq1  TTTATCTTCCATTCCACAGCGCAAAATTAAAACTTTCTCCATTTTGAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTCCATTCCACAGCGCAAAATTAAAACTTTCTCCATTTTGAGTT  600

seq1  AATTTCAGTGTCATCTACAACCACAAGAAACAGAGAACTGAATTTAGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGTGTCATCTACAACCACAAGAAACAGAGAACTGAATTTAGTTC  650

seq1  TTCTAGAAGAACTCTTAACCACCGAGCTGTCTCTCTAACCTCCATGTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAAGAACTCTTAACCACCGAGCTGTCTCTCTAACCTCCATGTTGA  700

seq1  CTTTTAAAAGACTCTAACCCTCAGTTCTTGATCTAGGGAATTTACTAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAAAGACTCTAACCCTCAGTTCTTGATCTAGGGAATTTACTAATC  750

seq1  TGTTCTTTGTTTCTACAAATTTATTGTTTCAAAAAAATGACAAAAATAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTGTTTCTACAAATTTATTGTTTCAAAAAAATGACAAAAATAGA  800

seq1  ATTATATATTACATGACCTTTGAATTGGACTTAAAAAAAAACAACCTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATATTACATGACCTTTGAATTGGACTTAAAAAAAAACAACCTCTG  850

seq1  ATTAGTTCTCTAATTCTTTGGGAATTC  877
      |||||||||||||||||||||||||||
seq2  ATTAGTTCTCTAATTCTTTGGGAATTC  877

seq1: chr1_155754419_155755508
seq2: B6Ng01-087B11.g_69_1148

seq1  GAATTCCAGATAGGACCCTGTGAGGGGATCCGAATGGGAGATCATCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATAGGACCCTGTGAGGGGATCCGAATGGGAGATCATCTTTG  50

seq1  GATAGCCCGTTTTATCTTGCATCGGGTGTGCGAAGACTTTGGGGTGATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCCCGTTTTATCTTGCATCGGGTGTGCGAAGACTTTGGGGTGATAG  100

seq1  CAACCTTTGACCCCAAGCCCATTCCAGGGAACTGGAATGGTGCAGGCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTTGACCCCAAGCCCATTCCAGGGAACTGGAATGGTGCAGGCTGC  150

seq1  CATACCAACTTCAGCACCAAGGCCATGCGGGAGGAGAATGGTCTGAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCAACTTCAGCACCAAGGCCATGCGGGAGGAGAATGGTCTGAAGTA  200

seq1  AGTACCTTCCTTTGGAGCCGTCTGTATTCTCATGGGGTAGAAGGGCTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTTCCTTTGGAGCCGTCTGTATTCTCATGGGGTAGAAGGGCTTTG  250

seq1  GGTACTCACAAGGCTGTACGTACATGCCTAGCTCTGCATATTTGTTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTCACAAGGCTGTACGTACATGCCTAGCTCTGCATATTTGTTCTAA  300

seq1  GCCTGTCAGTTTGTGCCTGTTGGAGAGGCGATAGGGTAAATACTTTAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCAGTTTGTGCCTGTTGGAGAGGCGATAGGGTAAATACTTTAGGA  350

seq1  ATAGAATTGACAGAAAAGCATTCGAACTAAGTAAAAATACAAGCAAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATTGACAGAAAAGCATTCGAACTAAGTAAAAATACAAGCAAATGG  400

seq1  GAAACTTAATTCTTACTGGTGGGAAGAGGCGAGTGATTGGGGGTCTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTAATTCTTACTGGTGGGAAGAGGCGAGTGATTGGGGGTCTTTCC  450

seq1  ATCCAGTGGATAATTTGCACTGCATGTTAAAGACTGGCCTGAGGGAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTGGATAATTTGCACTGCATGTTAAAGACTGGCCTGAGGGAGACA  500

seq1  GTGCCTTCTTTCTTCTGGGATTCATGCCCGCTCCCATCCTTGTCGATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTCTTTCTTCTGGGATTCATGCCCGCTCCCATCCTTGTCGATGGA  550

seq1  CCCTCATCTTCACTGTTTCCACTAGGTGCATTGAGGAGGCCATTGACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCATCTTCACTGTTTCCACTAGGTGCATTGAGGAGGCCATTGACAAA  600

seq1  CTGAGCAAGAGGCACCAGTACCACATTCGCGCCTACGATCCCAAGGGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAAGAGGCACCAGTACCACATTCGCGCCTACGATCCCAAGGGGGG  650

seq1  CCTGGACAACGCCCGGCGTCTGACTGGATTCCACGAAACCTCCAACATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACAACGCCCGGCGTCTGACTGGATTCCACGAAACCTCCAACATCA  700

seq1  ACGACTTTTCTGCCGGTGTTGCCAACCGCGGTGCCAGTATCCGCATTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACTTTTCTGCCGGTGTTGCCAACCGCGGTGCCAGTATCCGCATTCCC  750

seq1  CGGACTGTCGGCCAGGAGAAGAAGGGCTACTTTGAAGACCGTCGGCCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTGTCGGCCAGGAGAAGAAGGGCTACTTTGAAGACCGTCGGCCTTC  800

seq1  TGCCAATTGTGACCCCTATGCGGTGACAGAAGCCATCGTCCGCACGTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATTGTGACCCCTATGCGGTGACAGAAGCCATCGTCCGCACGTGTC  850

seq1  TCCTCAACGAAACAGGCGACGAACCCTTCCAATACAAGAACTAAGTGGAC  900
      |||||||||||||||||||||||| |||||||||| ||||||||||||||
seq2  TCCTCAACGAAACAGGCGACGAACTCTTCCAATAC-AGAACTAAGTGGAC  899

seq1  TAGACTTCCAGTGATCCCTCTCCCAGCTCTTCCCTTTCCCAGTTGTCCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTCCAGTGATCCCTCTCCCAGCTCTTCCCTTTCCCAGTTGTCCCC  949

seq1  ACTGTAACTCAAAAGGATGGAATACCAAGGTCTTTTTATTCCTCGTGCCC  1000
      |||||||||||||| ||||||||||||||||| ||||||| |||||||||
seq2  ACTGTAACTCAAAA-GATGGAATACCAAGGTC-TTTTATT-CTCGTGCCC  996

seq1  AGTTAATCTTGCTTTTGTTGGTCAGAATAGAGGGGTCAGGTTCTTAATCT  1050
      |||||||||||| |||||||||||||||||| |||||||  || ||||||
seq2  AGTTAATCTTGC-TTTGTTGGTCAGAATAGA-GGGTCAG--TC-TAATCT  1041

seq1  CTACACACCAACCCTTTCTTTCCTATCTAGCTTTCTAGTA  1090
      |||| |||  ||||||||||||||||||||||||||||||
seq2  CTAC-CACACACCCTTTCTTTCCTATCTAGCTTTCTAGTA  1080