BAC Information

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BAC

Clone NameB6Ng01-087G10
Chromosome1 (Build37)2 (Build37)
Map Location 31,437,783 - 31,438,07831,377,869 - 31,378,634
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616, 4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262
Downstream geneLOC624275, LOC666056, LOC100041238, Khdrbs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087G10.bB6Ng01-087G10.g
ACCDH900536DH900537
length662768
definitionDH900536|Mus musculus domesticus DNA, BAC clone: B6Ng01-087G10, 5' end.DH900537|Mus musculus domesticus DNA, BAC clone: B6Ng01-087G10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(31,437,783 - 31,438,078)(31,377,869 - 31,378,634)
sequence
gaattccaggccagcctggtctacagagcaagttctaggacagccagggc
tgcacacagagaatctctgtcttagaagagagacagagagacagaaagag
agagaataaacagaaagcctgccatcagaaaacacccttgaatagacttc
ccacattttgtttgtttggttggttggatggtttttttgagacatggtct
atgtggccctggctgacctggaacttgctatgtagatcagactggcctca
aagaccttctagcctctggctcctgaatgctgggattaaaactgtgtacc
actacactgatcaaagtctctactttttaatttcaggcctctttacactt
ttaaaaaaatcagaggcctagcaaacacataagtggatgctcacagtcag
ctattggatggatcacaggacccccaatggaggagctagagagagtaccc
aaggagctaaagggatctgcaactctataggtggaacaacaatatgaact
aaccagtaacccccagagcttgtgtctctagctgcatatgtatcaaaaga
tggcctaattggctatcactggaaagagaggcccattggacatgcaaact
ttatatgccccagtacaggggaacgccagggccaaaaagtgggagtgggt
gggtaggggagt
gaattcaggatctcctatatgcttaattctaccactgagctacatatcta
gccctacccaataccaaacacacacaccatgcatatgcagacaatcaggt
ccacacatatacataaaacataaaaacaaaataattaattaaaaataaaa
tcttgagggctggagaggtgtctcagtggttaagagcactggctgttctt
ccaaaggacctgagttcaagtcccagcaaccacatggcagctcacaactg
tctgtaattccaggtccagcggatctgacatcttcgtacaggcagaacac
aaatgtaaattaaaaaaaaaaataagaaaataaagtctgacatttccaaa
ctagagatagtggcacaaatctgtaataccagcacttgggaggcaatctc
aaattcaagaccagcccagactactttactgttcaaggacagcctgcatc
acatagcaaaaactattaaaccacctttgtatcttagttaaaaatcaatc
aacagccaggagtgccagcgtacacctttaatcccaacatgtgaaaggta
gcagaggcagacaggtctctaagtttgaggccagcctggtctacagagtg
agttccaggacagccagggctacacagagaaaccctgtccagaaaaaaaa
acaaaaacaaagcaaaattctgtacttgtggccatgggtccatttttgga
ttctattttctcctctgattatatcgctgccttgacaaagacgctctggt
tactgtagttttatggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_31437783_31438078
seq2: B6Ng01-087G10.b_408_705

seq1  GGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGTATAGATC  50
      ||||||||||||||| |||||||||||||||||||||||||| || ||||
seq2  GGCCTAGCAAACACATAAGTGGATGCTCACAGTCAGCTATTGGATGGATC  50

seq1  ACAGGGCCCGCAATGGAGGAGCTAGAAAAAGTACCCAAAGAGCTAAAGGG  100
      ||||| ||| |||||||||||||||| | ||||||||| |||||||||||
seq2  ACAGGACCCCCAATGGAGGAGCTAGAGAGAGTACCCAAGGAGCTAAAGGG  100

seq1  ATCTGCAACCCTATAGGTGGAACAACGATATGAACTAATCAGTA--CCCC  148
      ||||||||| |||||||||||||||| ||||||||||| |||||  ||||
seq2  ATCTGCAACTCTATAGGTGGAACAACAATATGAACTAACCAGTAACCCCC  150

seq1  TGAGCTCTTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCC  198
       |||||  || |||||||||||||| ||||||||||||||||| | ||| 
seq2  AGAGCTTGTGTCTCTAGCTGCATATGTATCAAAAGATGGCCTAATTGGCT  200

seq1  ATCACTGGAAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTGCCTCAGT  248
      ||||||||||||||||||||||||| | |||||||||||| |||| ||||
seq2  ATCACTGGAAAGAGAGGCCCATTGGACATGCAAACTTTATATGCCCCAGT  250

seq1  ACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTGGGGGAGT  296
      ||||||||| ||||||||||| |||||||||||||||||| |||||||
seq2  ACAGGGGAACGCCAGGGCCAAAAAGTGGGAGTGGGTGGGTAGGGGAGT  298

seq1: chr2_31377869_31378634
seq2: B6Ng01-087G10.g_68_835

seq1  GAATTCAGGATCTCCTATATGCTTAATTCTACCACTGAGCTACATATCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGATCTCCTATATGCTTAATTCTACCACTGAGCTACATATCTA  50

seq1  GCCCTACCCAATACCAAACACACACACCATGCATATGCAGACAATCAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTACCCAATACCAAACACACACACCATGCATATGCAGACAATCAGGT  100

seq1  CCACACATATACATAAAACATAAAAACAAAATAATTAATTAAAAATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACATATACATAAAACATAAAAACAAAATAATTAATTAAAAATAAAA  150

seq1  TCTTGAGGGCTGGAGAGGTGTCTCAGTGGTTAAGAGCACTGGCTGTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGGGCTGGAGAGGTGTCTCAGTGGTTAAGAGCACTGGCTGTTCTT  200

seq1  CCAAAGGACCTGAGTTCAAGTCCCAGCAACCACATGGCAGCTCACAACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGACCTGAGTTCAAGTCCCAGCAACCACATGGCAGCTCACAACTG  250

seq1  TCTGTAATTCCAGGTCCAGCGGATCTGACATCTTCGTACAGGCAGAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATTCCAGGTCCAGCGGATCTGACATCTTCGTACAGGCAGAACAC  300

seq1  AAATGTAAATTAAAAAAAAAAATAAGAAAATAAAGTCTGACATTTCCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAAATTAAAAAAAAAAATAAGAAAATAAAGTCTGACATTTCCAAA  350

seq1  CTAGAGATAGTGGCACAAATCTGTAATACCAGCACTTGGGAGGCAATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGATAGTGGCACAAATCTGTAATACCAGCACTTGGGAGGCAATCTC  400

seq1  AAATTCAAGACCAGCCCAGACTACTTTACTGTTCAAGGACAGCCTGCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAAGACCAGCCCAGACTACTTTACTGTTCAAGGACAGCCTGCATC  450

seq1  ACATAGCAAAAACTATTAAACCACCTTTGTATCTTAGTTAAAAATCAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCAAAAACTATTAAACCACCTTTGTATCTTAGTTAAAAATCAATC  500

seq1  AACAGCCAGGAGTGCCAGCGTACACCTTTAATCCCAACATGTGAAAGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCAGGAGTGCCAGCGTACACCTTTAATCCCAACATGTGAAAGGTA  550

seq1  GCAGAGGCAGACAGGTCTCTAAGTTTGAGGCCAGCCTGGTCTACAGAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGACAGGTCTCTAAGTTTGAGGCCAGCCTGGTCTACAGAGTG  600

seq1  AGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCCAGAAAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCCAGAAAAAAAA  650

seq1  --CAAAACAAAGCAAAA-TCAGTAC-TGTGGCCATGGGTCCATTTTTGGA  696
         |||||||||||||| || |||| ||||||||||||||||||||||||
seq2  ACAAAAACAAAGCAAAATTCTGTACTTGTGGCCATGGGTCCATTTTTGGA  700

seq1  TTCTATTTTCTCCTCTGATTTATATTGCTGTCCTTGACAAAGACGCTCTG  746
      |||||||||||||||||| |||||| |||| |||||||||||||||||||
seq2  TTCTATTTTCTCCTCTGA-TTATATCGCTG-CCTTGACAAAGACGCTCTG  748

seq1  GTTACTGTAGTTTTATGGTA  766
      ||||||||||||||||||||
seq2  GTTACTGTAGTTTTATGGTA  768