BAC Information

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BAC

Clone NameB6Ng01-087I10
Chromosome1 (Build37)13 (Build37)
Map Location 61,720,737 - 61,721,2527,332,123 - 7,332,687
singlet/doubletsingletsinglet
Overlap genePard3b
Upstream geneEif4a-ps4, Cd28, LOC667555, Rpl18-rs8, Ctla4, LOC100043049, Icos, LOC433313, LOC100042566
Downstream geneLOC667592
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087I10.bB6Ng01-087I10.g
ACCDH900628DH900629
length1,045559
definitionDH900628|Mus musculus domesticus DNA, BAC clone: B6Ng01-087I10, 5' end.DH900629|Mus musculus domesticus DNA, BAC clone: B6Ng01-087I10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(61,720,737 - 61,721,252)(7,332,123 - 7,332,687)
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagtta
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaagtgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggcttttttttggctgggagattattaattactgcttctatttc
tttaggggatatggaactgtttagatggtcaacttgatcctgattcaact
ttggtacctggtatctgtccagaaatttgtccatttcgttcatgttttcc
agttttgttgagtatagccttttgtagaaggatctgatggtgttttggat
ttcttcaggatctgttgttatgtctcccttttcatttctgattttgttaa
ttaggattttgtccctgtgccctctagtgagtctagctaaggatttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttgtttccacttggttgatttcagccctgagtttgattattt
cctgccgtctactcctcttgggtgaatttgcttcctttttttctagagct
tttagatgtgttgtcaagctgctagtatgtgctctctcccatttcttctg
gaggcactcagagctatgagttccctcttagaaatgctttcatgtgtccc
atagtttgggtacgtgtggctcatttcataaactctaaacgtctt
actcctagtcactcccattctcggggtgtaatagtggggtgatgggcaag
caacaaatcaggagctgtcacgccatatcaggtgctgaaacgtcacgctg
cgggttataaaagcagcgccattttcccggttcggaatcttcctgagaag
caagcaataaagctcttgctgcggaagattctggtttgttgcgtctttct
tgccggtcgagcgggacgcaatacaaacacagtaaaacctggaataatct
gagacatggtacgtgttaagaaactaaaagtacccaaagagctgacaggg
tttgcagccccataggtggaacaataatatgaactaaccagtacccccag
ggctcccaggaactaaaccaccaaccaaagaaaacacatggtgagactca
tgcctccaagtgcatatgtagcagaggatggcctggtcagtcattaatgg
gaggagagatgcttggccctgtaaactctctatgccccagtataggggaa
ttccagggccaggaagtaggagtaggtgggttggtgagcaggggaagagg
gaggggata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_61720737_61721252
seq2: B6Ng01-087I10.b_46_562 (reverse)

seq1  GTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACC  50
      || ||||||| |||||||||||||||||||| ||||||| ||||||| ||
seq2  GTTCCATATCCCCTAAAGAAATAGAAGCAGTAATTAATAATCTCCCAGCC  50

seq1  -AAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCT  99
       |||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCT  100

seq1  TCAAAGAAGATCTAATTCCAATTCTGCACAAACTATTTCACAAAATAGAA  149
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCAAAGAAGATCTAATTCCACTTCTGCACAAACTATTTCACAAAATAGAA  150

seq1  GTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGAT  199
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTAGAAGGTACTCTACCTAACTCATTTTATGAAGCCACTATTACTCTGAT  200

seq1  ACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTT  250

seq1  CTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGA  300

seq1  ATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTAT  350

seq1  TCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCC  400

seq1  ATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGAT  450

seq1  GCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTCTT  500

seq1  GGAAAGATCAGGAATTC  516
      |||||||||||||||||
seq2  GGAAAGATCAGGAATTC  517

seq1: chr13_7332123_7332687
seq2: B6Ng01-087I10.g_68_632 (reverse)

seq1  TATCCCCTCCCTCTTCCCCTGCTCACCAACCCACCTACTCCTACTTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCTCCCTCTTCCCCTGCTCACCAACCCACCTACTCCTACTTCCTG  50

seq1  GCCCTGGAATTCCCCTATACTGGGGCATAGAGAGTTTACAGGGCCAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGAATTCCCCTATACTGGGGCATAGAGAGTTTACAGGGCCAAGCA  100

seq1  TCTCTCCTCCCATTAATGACTGACCAGGCCATCCTCTGCTACATATGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTCCCATTAATGACTGACCAGGCCATCCTCTGCTACATATGCAC  150

seq1  TTGGAGGCATGAGTCTCACCATGTGTTTTCTTTGGTTGGTGGTTTAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGCATGAGTCTCACCATGTGTTTTCTTTGGTTGGTGGTTTAGTTC  200

seq1  CTGGGAGCCCTGGGGGTACTGGTTAGTTCATATTATTGTTCCACCTATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGCCCTGGGGGTACTGGTTAGTTCATATTATTGTTCCACCTATGG  250

seq1  GGCTGCAAACCCTGTCAGCTCTTTGGGTACTTTTAGTTTCTTAACACGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAAACCCTGTCAGCTCTTTGGGTACTTTTAGTTTCTTAACACGTA  300

seq1  CCATGTCTCAGATTATTCCAGGTTTTACTGTGTTTGTATTGCGTCCCGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCTCAGATTATTCCAGGTTTTACTGTGTTTGTATTGCGTCCCGCT  350

seq1  CGACCGGCAAGAAAGACGCAACAAACCAGAATCTTCCGCAGCAAGAGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCGGCAAGAAAGACGCAACAAACCAGAATCTTCCGCAGCAAGAGCTT  400

seq1  TATTGCTTGCTTCTCAGGAAGATTCCGAACCGGGAAAATGGCGCTGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTTGCTTCTCAGGAAGATTCCGAACCGGGAAAATGGCGCTGCTTT  450

seq1  TATAACCCGCAGCGTGACGTTTCAGCACCTGATATGGCGTGACAGCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACCCGCAGCGTGACGTTTCAGCACCTGATATGGCGTGACAGCTCCT  500

seq1  GATTTGTTGCTTGCCCATCACCCCACTATTACACCCCGAGAATGGGAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTTGCTTGCCCATCACCCCACTATTACACCCCGAGAATGGGAGTG  550

seq1  ACTAGGAGTGAATTC  565
      |||||||||||||||
seq2  ACTAGGAGTGAATTC  565