BAC Information

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BAC

Clone NameB6Ng01-087M16
Chromosome1 (Build37)
Map Location 114,171,565 - 114,305,154
singlet/doubletdoublet
Overlap geneLOC666615
Upstream geneEG666578, Dsel, LOC547247, EG626897
Downstream geneLOC666635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087M16.bB6Ng01-087M16.g
ACCDH900818DH900819
length1,055987
definitionDH900818|Mus musculus domesticus DNA, BAC clone: B6Ng01-087M16, 5' end.DH900819|Mus musculus domesticus DNA, BAC clone: B6Ng01-087M16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,304,092 - 114,305,154)(114,171,565 - 114,172,550)
sequence
gaattctctagtcattggcttttaaaagtaggtgtatagattcagaggta
ctatgaatcagtaattttgtaataggaattcctttgactcttaagggatg
aagtctttaggactggcaaataagctacttaaggggaacttaaaagaaac
acgacaattctgggcttgataatgaatatgtcattgaacacctttgcatc
tgcctagagcaaatttaaaagaaaaacacttctctccacagaattagtaa
tttattctcaaggccttttacatatgcctctaaaacatttaatttttttt
ctcactcctaggacttagctgataacttctgtgtatttttagccattttc
atatatataatatgtcattaatccaaatgtcagaaagagaaaccaaatca
aagttcatttcaaaactgtgtgtggataaaatatgtttaagtgttaaaga
ttctcatgaatcttagcaaagctaatttgactgtgatagtgtgtgtaagg
cttcatataataatctttgatataaacttaaataattacagaaagcaatg
taaatattatattaatttatgaaagataataccttggtagcctaacttgt
agctagaagaatttgacttcgtacctcttctgatctaacactgacttaag
tagcttactagtaagtccttaagtcttaagtttgagacatgccagcattt
ggtaatcttggtgttgaatggtacaattaagtgttgccttaaaatgccag
tattttctgtcctctgtcccccactcccttccttctctgtcctcatggcc
ctgctcttgtctgcctgcctctacccagtctgcaggtcctcacccctctc
tcttctcccaataaacctccttatacctgacctcttctatgtagtcattt
ctcaagagcacatcttggcatgtgtctgcagtaataccccctgtgtatta
tatttcagcatcatgtatacattggtatcatgataatcagcccctatgat
gtgtctttaatgaacttcctgggggggagtacattatcgcatagaaaact
gctat
gaattctgttattagataaagacaatggtttaaaatccaagagttatgtg
actgaattaactttccactagactgtagaggacttgaagagatgtagaat
aagtaagccagtgacaaatccgtgtctcatggtcaaagatggacagacaa
gaaaaccatctttgccttgttaacttttatttcttaaactccaatgacga
attctttattgcctctcactgctttttttgcacctctctttaaaatcttg
cattagtcataggccctcttgctactaatattcaaattatgaatcctcaa
tccctattgctgactacttaaacccttaattattcaagccccaattttta
atccaaaaccaatttgttttagtctttccacaccaactccaaaatctgct
acaaatcacccataatactgtatacaatagcctctccaatcttttagatt
tctaaaataattgaatttcagaacacttgcacacaccaaaaaaagaggaa
acgcaaaaatcccttaaagaattacaggaaaacacaaccaaaagagtgaa
ggaattgaacaaaatcatccagcatataaaagtggaagtagaaacaataa
aaaaaaaaaaagaatcacaaaaggagataactctggagatagaaaaccta
agaaagagatcaggagccatagatgcaagcatcaacaacagaatacaaga
gatagtagaaagaatctcaggtgcagaagattccatagaaaacatggaca
ctacaatgaaagaaaatctaaaatgcaaaaagatcttaactcaaaacata
caggaaatccaggacacagtgagaagcccaaaccaaaggttagtaggtat
aagattttcatcttaaaggaccagtaagtatcttcaacaaaactatagaa
gagatttccctaacctaaaggaagacatggccatgaacatacagagtcta
cagaattcagatagtatggaccaaaatggatacctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_114304092_114305154
seq2: B6Ng01-087M16.b_46_1100 (reverse)

seq1  ATAGCACATTTTCTATAC-AAAATGTACTCCCCCCCAAGAAGTTCATTAA  49
      ||||||  |||||||| | | |||||||||||||||| ||||||||||||
seq2  ATAGCA-GTTTTCTATGCGATAATGTACTCCCCCCCAGGAAGTTCATTAA  49

seq1  AAGAACACATCATAAGGGGCTGATTATCATGATAACAAATGTAATACATG  99
      |   ||||||||| ||||||||||||||||||| || ||||| |||||||
seq2  A--GACACATCAT-AGGGGCTGATTATCATGAT-ACCAATGT-ATACATG  94

seq1  AGGCTGAAATATAATACAACAAGGGGGTATTACTGCAGACACATGCCAAG  149
      | ||||||||||||||||   |||||||||||||||||||||||||||||
seq2  ATGCTGAAATATAATACA--CAGGGGGTATTACTGCAGACACATGCCAAG  142

seq1  ATGTGCTCTTGAGAAATGACTACATAGAAGAGGTCAGGTATAAGGAGGTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTCTTGAGAAATGACTACATAGAAGAGGTCAGGTATAAGGAGGTT  192

seq1  TATTGGGAGAAGAGAGAGGGGTGAGGACCTGCAGACTGGGTAGAGGCAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGAGAAGAGAGAGGGGTGAGGACCTGCAGACTGGGTAGAGGCAGG  242

seq1  CAGACAAGAGCAGGGCCATGAGGACAGAGAAGGAAGGGAGTGGGGGACAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAGAGCAGGGCCATGAGGACAGAGAAGGAAGGGAGTGGGGGACAG  292

seq1  AGGACAGAAAATACTGGCATTTTTAAGGCAACACTTAATTGTACCATTCA  349
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGGACAGAAAATACTGGCA-TTTTAAGGCAACACTTAATTGTACCATTCA  341

seq1  ACACCAAGATTACCAAATGCTGGCATGTCTCAAACTTAAGACTTAAGGAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAAGATTACCAAATGCTGGCATGTCTCAAACTTAAGACTTAAGGAC  391

seq1  TTACTAGTAAGCTACTTAAGTCAGTGTTAGATCAGAAGAGGTACGAAGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGTAAGCTACTTAAGTCAGTGTTAGATCAGAAGAGGTACGAAGTC  441

seq1  AAATTCTTCTAGCTACAAGTTAGGCTACCAAGGTATTATCTTTCATAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTTCTAGCTACAAGTTAGGCTACCAAGGTATTATCTTTCATAAAT  491

seq1  TAATATAATATTTACATTGCTTTCTGTAATTATTTAAGTTTATATCAAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAATATTTACATTGCTTTCTGTAATTATTTAAGTTTATATCAAAG  541

seq1  ATTATTATATGAAGCCTTACACACACTATCACAGTCAAATTAGCTTTGCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATATGAAGCCTTACACACACTATCACAGTCAAATTAGCTTTGCT  591

seq1  AAGATTCATGAGAATCTTTAACACTTAAACATATTTTATCCACACACAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCATGAGAATCTTTAACACTTAAACATATTTTATCCACACACAGT  641

seq1  TTTGAAATGAACTTTGATTTGGTTTCTCTTTCTGACATTTGGATTAATGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATGAACTTTGATTTGGTTTCTCTTTCTGACATTTGGATTAATGA  691

seq1  CATATTATATATATGAAAATGGCTAAAAATACACAGAAGTTATCAGCTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTATATATATGAAAATGGCTAAAAATACACAGAAGTTATCAGCTAA  741

seq1  GTCCTAGGAGTGAGAAAAAAAATTAAATGTTTTAGAGGCATATGTAAAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAGGAGTGAGAAAAAAAATTAAATGTTTTAGAGGCATATGTAAAAG  791

seq1  GCCTTGAGAATAAATTACTAATTCTGTGGAGAGAAGTGTTTTTCTTTTAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAGAATAAATTACTAATTCTGTGGAGAGAAGTGTTTTTCTTTTAA  841

seq1  ATTTGCTCTAGGCAGATGCAAAGGTGTTCAATGACATATTCATTATCAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTCTAGGCAGATGCAAAGGTGTTCAATGACATATTCATTATCAAG  891

seq1  CCCAGAATTGTCGTGTTTCTTTTAAGTTCCCCTTAAGTAGCTTATTTGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAATTGTCGTGTTTCTTTTAAGTTCCCCTTAAGTAGCTTATTTGCC  941

seq1  AGTCCTAAAGACTTCATCCCTTAAGAGTCAAAGGAATTCCTATTACAAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTAAAGACTTCATCCCTTAAGAGTCAAAGGAATTCCTATTACAAAA  991

seq1  TTACTGATTCATAGTACCTCTGAATCTATACACCTACTTTTAAAAGCAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTACTGATTCATAGTACCTCTGAATCTATACACCTACTTTTAAAAGCCAA  1041

seq1  TGACTAGAGAATTC  1063
      ||||||||||||||
seq2  TGACTAGAGAATTC  1055

seq1: chr1_114171565_114172550
seq2: B6Ng01-087M16.g_70_1049

seq1  GAATTCTGTTAGTAGATAAAGACAATGGTTTAAAATCCAAGATTTATGTG  50
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  GAATTCTGTTATTAGATAAAGACAATGGTTTAAAATCCAAGAGTTATGTG  50

seq1  ACTGAATTAACTTTCCACTAGACTGTAGAGGACTTGAAGAGATGTAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATTAACTTTCCACTAGACTGTAGAGGACTTGAAGAGATGTAGAAT  100

seq1  AAGTAAGCCAGTGACAAATCCATGTCTCATGGTCAAAGATGGACAGACAA  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAGTAAGCCAGTGACAAATCCGTGTCTCATGGTCAAAGATGGACAGACAA  150

seq1  GAAAACCATCTTTGCCTTGTTAACTTTTATTTCTTAAACTCCAATGACAA  200
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAAAACCATCTTTGCCTTGTTAACTTTTATTTCTTAAACTCCAATGACGA  200

seq1  ATTCTTTATTGCCTCTCACTGCTTTTTTTGCACCTCTCTTTAAAATCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTATTGCCTCTCACTGCTTTTTTTGCACCTCTCTTTAAAATCTTG  250

seq1  CATTAGTCATAGGCCCTCTTGCTACTAATATTCAAATTATGAATCCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGTCATAGGCCCTCTTGCTACTAATATTCAAATTATGAATCCTCAA  300

seq1  TCCCTATTGCTGACTACTTAAACCCTTAATTATTCAAGCCCCAATTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATTGCTGACTACTTAAACCCTTAATTATTCAAGCCCCAATTTTTA  350

seq1  ATCCAAAACCAATTTGTTTTAGTCTTTCCACACCAACTCCAAAATCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAAACCAATTTGTTTTAGTCTTTCCACACCAACTCCAAAATCTGCT  400

seq1  ACAAATCACCCATAATACTGTATACAATAGCCTCTCCAATCTTTTAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCACCCATAATACTGTATACAATAGCCTCTCCAATCTTTTAGATT  450

seq1  TCTAAAATAATTGAATTTCAGAACACTTGCACACACCAAAAAAAGAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATAATTGAATTTCAGAACACTTGCACACACCAAAAAAAGAGGAA  500

seq1  ACACAAAAATCCCTTAAAGAATTACAGGAAAACACAACCAAAAGAGTGAA  550
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAAAAATCCCTTAAAGAATTACAGGAAAACACAACCAAAAGAGTGAA  550

seq1  GGAATTGAACAAAATCATCCAGCATATAAAAGTGGAAGTAGAAACAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGAACAAAATCATCCAGCATATAAAAGTGGAAGTAGAAACAATAA  600

seq1  AAAAAAAAAAAGAATCACAAAAGGAGATAACTCTGGAGATAGAAAACCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGAATCACAAAAGGAGATAACTCTGGAGATAGAAAACCTA  650

seq1  AGAAAGAGATCAGGAGCCATAGATGCAAGCATCAACAACAGAATACAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGATCAGGAGCCATAGATGCAAGCATCAACAACAGAATACAAGA  700

seq1  GATAGTAGAAAGAATCTCAGGTGCAGAAGATTCCATAGAAAACATGGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTAGAAAGAATCTCAGGTGCAGAAGATTCCATAGAAAACATGGACA  750

seq1  CTACAATGAAAGAAAATCTAAAATGCAAAAAGATCTTAACTCAAAACATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATGAAAGAAAATCTAAAATGCAAAAAGATCTTAACTCAAAACATA  800

seq1  CAGGAAATCCAGGACACAGTGAGAAGCCCAAACCAAAGGTTAGTAGGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAATCCAGGACACAGTGAGAAGCCCAAACCAAAGGTTAGTAGGTAT  850

seq1  AAGATTTTCAACTTAAAGGACCAGTAAAGTATCTTCAACAAAACTATAGA  900
      |||||||||| |||||||||||||| ||||||||||||||||||||||||
seq2  AAGATTTTCATCTTAAAGGACCAGT-AAGTATCTTCAACAAAACTATAGA  899

seq1  AGAAGATTTCCCTAACCTAAAGAAAGATATGGCCATGAACATACAGGAAG  950
      || ||||||||||||||||||| |||| ||||||||||||||||||  ||
seq2  AG-AGATTTCCCTAACCTAAAGGAAGACATGGCCATGAACATACAG--AG  946

seq1  CCAACAGAAATCCAGATAGTATGGACCAAAAATGGA  986
       | |||| ||| ||||||||||||||| ||||||||
seq2  TCTACAG-AATTCAGATAGTATGGACC-AAAATGGA  980