BAC Information

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BAC

Clone NameB6Ng01-088C04
Chromosome1 (Build37)
Map Location 52,787,063 - 52,787,691
singlet/doubletsinglet
Overlap genenone
Upstream geneMyo1b, EG667010, LOC667014, Stat4, LOC100042634, Stat1, Gls, LOC546735, Nab1, LOC546736, Gm553, LOC100042094, EG433305, 5330401P04Rik, 2210010L05Rik
Downstream geneInpp1, Hibch, 1700019D03Rik, Gdf8, 1700019A02Rik, Pms1, LOC671024, Ormdl1, Osgepl1, Asnsd1, EG627858, EG627866, LOC100042162, Dnahc7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088C04.bB6Ng01-088C04.g
ACCDH901073DH901074
length1,288629
definitionDH901073|Mus musculus domesticus DNA, BAC clone: B6Ng01-088C04, 5' end.DH901074|Mus musculus domesticus DNA, BAC clone: B6Ng01-088C04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggctggtagactcttctataggttgaacctgcagctgctctt
ggaataactgctctagtatctgtaacttttcttttgttacaggccattgt
tctgtccaaacaggtttttaagttttccaagttagtggtagggcaggtgg
agataggccagcagtgtctcccccatatgaaattgaagagtcagcctgtg
ctgtaaactgcttatggacagcttggacagtctgtaactgtctttgatac
caattttaaatgctttattaggaacatttttttttctcttacagcccctc
tctaaagttggaggaatgctaatctgtgcttcccactgttgcaatagatc
tctttcccaaagatttatggctatattaatcacatatggtgttaacttcc
ctatttgatattctgatcctatgctattaatcagactttgttttatctga
gacaatgccttaattcctaggagctctgtagaataccatttgcagtggcc
aaactggagtccaggaatcttgtaatattatagttatttctgtatccact
aagcctttactttcaattttatctaactgtaatttttactttggtctctt
atcatttatagtagtttgccaaatatctgggttttggtatccttagaatc
tcttgtttttatccataggagacgctctatctctgttaatgctttattta
cattttgagcagttctctttgtcctatcaggctttgaattttttttttaa
gttgtttttcagaatagtctttccttggtggaccagaaaccaatggctca
tgttttttttgttgggccttgagcatagccccttagtcagtttccaacat
taaggaattgtctcaattatctttggatgacctacatttgtgagcttatg
tccattttcttcacatctacatttcacaggaatcttttctttatgattat
gattagagaagaatttatccttaggagctatttgtctacagtcctttagg
aatgacctgatatttcacagccatagcaatgggcaattgtaatttatatc
tcttgtaattgtttgtccaccctacttaaattgtggacgtaagcctgata
tccattagtagtttgatcattcatatagagggttgaatatgaactcctta
aagggctaatagcaaattgcaattcggattacaattacaaagacctaaag
agtcattaaatccttctggcctttgaatccgtagatgtgcctaatagagc
tatagttgtggcgtccatactaatagatatcactgtga
gaattcaaacatttctgatgttcagtggcaggcactggtgtctgcccaac
ccactttctgtagtatctcttcaatctcatctctatggtctgttaggcac
atgaccccagctctttctcacttcccggcttttcttttgcagaacaccat
ctgatcatctcctacttgtccttcagctcccagcttaatgccacttcctc
atgaaggctttcttgtccctctgatctaaattatatccctccattttctc
ctgtgtgtctccagtttgtttgcttttcctttgttggtgacttctggctg
attctcaaaattcattctccctcttttcagtctaaatagaatttacctgg
gcacccagcctgtttccctctttagtgccaagatgtatctgagtcccagc
caatgggaaatgaatggacaggatggagcacatcggaaggtttcccacta
aggcctgggaactacaatctgattacaatgtgatgccaaagctgtcatct
tgggccagaggatggaaactttgtttgttgtggggattaggaggtgggag
tgggggcaactactctataagagaaaactttgcaaacccatttgactatt
gacttttactgcctttttgttacagtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_52787063_52787691
seq2: B6Ng01-088C04.g_69_697 (reverse)

seq1  TTCACTGTAAC-AAATGGCAGTAAAAGTCTATTAGTCAAATAGGTTTGCA  49
      ||||||||||| ||| ||||||||||||| | ||||||||| ||||||||
seq2  TTCACTGTAACAAAAAGGCAGTAAAAGTC-AATAGTCAAATGGGTTTGCA  49

seq1  TAGTTTTCTCCTATAGAGTAGTTGCCCCCACTCCCACCTCCTAATCCCCA  99
       ||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTCTCTTATAGAGTAGTTGCCCCCACTCCCACCTCCTAATCCCCA  99

seq1  CAACAAACAAAGTTTCCATCCTCTGGCCCAAGATGACAGCTTTGGCATCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAACAAAGTTTCCATCCTCTGGCCCAAGATGACAGCTTTGGCATCA  149

seq1  CATTGTAATCAGATTGTAGTTCCCAGGCCTTAGTGGGAAACCTTCCGATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTAATCAGATTGTAGTTCCCAGGCCTTAGTGGGAAACCTTCCGATG  199

seq1  TGCTCCATCCTGTCCATTCATTTCCCATTGGCTGGGACTCAGATACATCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCATCCTGTCCATTCATTTCCCATTGGCTGGGACTCAGATACATCT  249

seq1  TGGCACTAAAGAGGGAAACAGGCTGGGTGCCCAGGTAAATTCTATTTAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTAAAGAGGGAAACAGGCTGGGTGCCCAGGTAAATTCTATTTAGA  299

seq1  CTGAAAAGAGGGAGAATGAATTTTGAGAATCAGCCAGAAGTCACCAACAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAGAGGGAGAATGAATTTTGAGAATCAGCCAGAAGTCACCAACAA  349

seq1  AGGAAAAGCAAACAAACTGGAGACACACAGGAGAAAATGGAGGGATATAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGCAAACAAACTGGAGACACACAGGAGAAAATGGAGGGATATAA  399

seq1  TTTAGATCAGAGGGACAAGAAAGCCTTCATGAGGAAGTGGCATTAAGCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATCAGAGGGACAAGAAAGCCTTCATGAGGAAGTGGCATTAAGCTG  449

seq1  GGAGCTGAAGGACAAGTAGGAGATGATCAGATGGTGTTCTGCAAAAGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGAAGGACAAGTAGGAGATGATCAGATGGTGTTCTGCAAAAGAAA  499

seq1  AGCCGGGAAGTGAGAAAGAGCTGGGGTCATGTGCCTAACAGACCATAGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGGAAGTGAGAAAGAGCTGGGGTCATGTGCCTAACAGACCATAGAG  549

seq1  ATGAGATTGAAGAGATACTACAGAAAGTGGGTTGGGCAGACACCAGTGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATTGAAGAGATACTACAGAAAGTGGGTTGGGCAGACACCAGTGCC  599

seq1  TGCCACTGAACATCAGAAATGTTTGAATTC  629
      ||||||||||||||||||||||||||||||
seq2  TGCCACTGAACATCAGAAATGTTTGAATTC  629