BAC Information

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BAC

Clone NameB6Ng01-088L23
Chromosome1 (Build37)
Map Location 100,549,191 - 100,549,736
singlet/doubletsinglet
Overlap genenone
Upstream geneD1Ertd622e, Hisppd1, Zh2c2, Pam, LOC100041823, LOC666153, LOC100040887, Slco6d1, LOC100041868, EG666182
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088L23.bB6Ng01-088L23.g
ACCDH901518DH901519
length7821,247
definitionDH901518|Mus musculus domesticus DNA, BAC clone: B6Ng01-088L23, 5' end.DH901519|Mus musculus domesticus DNA, BAC clone: B6Ng01-088L23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagggtcagaatttttgactgtgggatggcaacaccatctatgta
cttgatgccctgttcctctccccactgttgggcatttatttcatctaagg
tccctccctttgagtcctgaaagtttctcacctcctaggtctctggtact
tcctagaggttccccacctcccaacctctccctgccctaagattgaatat
ttcaatttattctactgaccctcgggacttctctctgccttcccttcccc
atacatgattattcaccccgtttcctctccctctcttctctcccacccat
gtccctccctccctctgcctcctgtgatcattttcttttccttcccaagt
gggattgaaagcatttcacttgggctcttctacttgttaagctttgagtt
cttttgattgtatcctaggtattttctttttttggctaatatccacttat
tagtgagtatatacaatgaatgtcttttggttatgaattacctatgtcaa
aaaaacctaacaagctagctgctaagttccatttttgtatgaaatgcttg
cttgctttcatggctgaagcttctgctatacagctgttagaaaatcaagc
ttgacctgcacctatacaggatatgaattaatttcactcttcaaaatcac
aagatgggctttgtctttaaaatcttaggactaacaatagctgaggcctt
acctagggaatctctctgttttggtgctggacagtttgttgttactgttg
tttttggtttggtttggtttggtttggtttgg
gaattctcagtaatatgggtaacattaaattgttgacaaaacatctcaaa
tgcttgtctataatagttccattatctgttttaatctcatttggaacaca
agcatagagaaataatgcagaaaatgactaattacattttttagttgctt
ctcctgctaaagcagttgcaactagagagcctgaaaaggtgtcagtagtc
acatgtacatattttatatttctaaaatcagaaatatgagtatccattgg
taataattgattaagtataagtctttgttaattatgtaccattatgtggt
acaggtagaaactgaggacaagtctttacaatttgacagacatattttct
aaaaattccaaattattatctcaagtattactattttgatgatgtgaaga
atgagattatatggctaattgttcttgtgtaaggtctataatcttcctgg
gatacaaatctactctggcattgccttaaggggtctttcccaggcagtcc
aggatggatgatttcttaaatatccaaagacatttaaaggaacagtactt
tttcttaacttgagttgtatatgcataaacaattgcaaaattcgatagtt
agaagtatctaaaaacagaataatttaaagcaattgtaagccctgagttc
catatatatatatatatatatatatatatatatatatatatatatatata
tacaaacatgatacaaattaaaagttttggtttaaacacttttaaaagca
gtgatgacaacatgtagttaaatggttttttgttgaagtagaggaaaact
catgagaataaacatgtgatccaatcatatattttctctcacatagaagg
ggctgtttataaatgcagtaaatgtattctttataggatgcatgcaaaaa
tttacaggaaataaaatttgcatgcaagcaaattttaacaacttattttt
ggataaataatgatcaatttttgtctaaaaagatttgctatgtaataaac
caaaataattagtattctgcaataaccaattttaatttgctgttggaaaa
caagggacagaaggtctcatcaagtttttatagactatcttttctaaaac
atggagggatgatcctacggttctatataatcaagtacacttttcataat
aggaggttataccttacctggatgaggaagatgaatctcgcttcattttg
ctatcaacaacgaataatccgcgatgagggcaggcatcaccacagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_100549191_100549736
seq2: B6Ng01-088L23.b_285_830 (reverse)

seq1  CCAAACCAAACCAAACCAAACCAAACCAAAAACAACAGTAACAACAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCAAACCAAACCAAACCAAACCAAAAACAACAGTAACAACAAACT  50

seq1  GTCCAGCACCAAAACAGAGAGATTCCCTAGGTAAGGCCTCAGCTATTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCACCAAAACAGAGAGATTCCCTAGGTAAGGCCTCAGCTATTGTT  100

seq1  AGTCCTAAGATTTTAAAGACAAAGCCCATCTTGTGATTTTGAAGAGTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTAAGATTTTAAAGACAAAGCCCATCTTGTGATTTTGAAGAGTGAA  150

seq1  ATTAATTCATATCCTGTATAGGTGCAGGTCAAGCTTGATTTTCTAACAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCATATCCTGTATAGGTGCAGGTCAAGCTTGATTTTCTAACAGC  200

seq1  TGTATAGCAGAAGCTTCAGCCATGAAAGCAAGCAAGCATTTCATACAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGCAGAAGCTTCAGCCATGAAAGCAAGCAAGCATTTCATACAAAA  250

seq1  ATGGAACTTAGCAGCTAGCTTGTTAGGTTTTTTTGACATAGGTAATTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACTTAGCAGCTAGCTTGTTAGGTTTTTTTGACATAGGTAATTCAT  300

seq1  AACCAAAAGACATTCATTGTATATACTCACTAATAAGTGGATATTAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAGACATTCATTGTATATACTCACTAATAAGTGGATATTAGCCA  350

seq1  AAAAAAGAAAATACCTAGGATACAATCAAAAGAACTCAAAGCTTAACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAATACCTAGGATACAATCAAAAGAACTCAAAGCTTAACAAG  400

seq1  TAGAAGAGCCCAAGTGAAATGCTTTCAATCCCACTTGGGAAGGAAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAGCCCAAGTGAAATGCTTTCAATCCCACTTGGGAAGGAAAAGAA  450

seq1  AATGATCACAGGAGGCAGAGGGAGGGAGGGACATGGGTGGGAGAGAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCACAGGAGGCAGAGGGAGGGAGGGACATGGGTGGGAGAGAAGAG  500

seq1  AGGGAGAGGAAACGGGGTGAATAATCATGTATGGGGAAGGGAAGGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGGAAACGGGGTGAATAATCATGTATGGGGAAGGGAAGGC  546