BAC Information

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BAC

Clone NameB6Ng01-089G21
Chromosome1 (Build37)
Map Location 149,643,442 - 149,644,617
singlet/doubletsinglet
Overlap genenone
Upstream geneB830045N13Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089G21.bB6Ng01-089G21.g
ACCDH902010DH902011
length5641,148
definitionDH902010|Mus musculus domesticus DNA, BAC clone: B6Ng01-089G21, 5' end.DH902011|Mus musculus domesticus DNA, BAC clone: B6Ng01-089G21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
actcctagtcactctcattctcggggtgtaatagtggggtgatgggcaag
caatgaatcgggagctgtcacgccatatcaggtgctgaaacgtcacgctg
caggttataaaagcagcgccattttcccggtttgggatcttcctgagaag
caagcaataaagctcttgccgcggaagattctggtttgttgcatctttct
tgccggtcgagcgggacgcaataagtggcgccgaagaacccgggaactgt
catcacaccggtgcaaggaagatccctcgttcgcggggcagaatcagaac
catgggacaaaaggctctacaaggtaagtacaatcttgaaatttctccag
agttagaagcccttttgattgtttgcacagcgattacacttttcctttcg
gtttcattttgtttccaccactggaactgctgactggttcttagtcgcgg
tcaggccaggacagcggcagtatgggaatctcccattctatagtagtggc
cttacgccttgttgcgtctttcttgccggtcgagtgggacgcaatatata
tatttgtgtgtgtg
gaattcctattatgtactcaaaaagaatacatgagccctgaaaatttagg
taaaatactgctttttcaagaactttagtttaatgcaaaagagattaatg
ctcattagctaataactgattagaaattatttgtaggtgggacatttaat
ttcatactgcataactcatttaacttttctagtgtttgtaaactttagaa
ttttgaaaaagttagaaaaatacatttttaccagcctagacacatgattt
atcaatatttttcagtgttgaaaagtattacaatctcacatatggtagaa
atctgtattaacaaatataacagtgtttataaagtaacttatttcaaatg
tattaatttacatttactgggaataattatatattttccattttattttt
ttaatgctctgctatagatcattgggaggataatgattcactgtggtcaa
gattttttttttaaattggtttttccagacagggtttctctgtgtagccc
tggccgtcatggaactcactgtatagaccaggctggccttaaactcagac
atctgcctgcctctgcctccaaagtgctggtattaaaggcatgtgccacc
actgccccgtttgccatcaagatcttggttatgttaaacctatgaggaca
ggtagcttattaaggcataaagtttttgagttttttatttatggcctaat
acaactaaaattccaatatgccatcctagctaagacacacctaatacaac
aagtatttaggtttacatttatgatagcaactttaaaaggaaaataaaca
gaaataaataaatgaaagtaagatatttgttcaccatgatcaagtaggct
tcatcccagggatgcagagtggtttaatgtacagaaatccatcaggtatt
cactgtataaggaactcagaggaaaaaatcatctaattaaatgctgaaaa
agatttcacaaagtacactcccattttgttaaaatatgagaatcagaaat
ttaaagttcatacttaacatattaaagcaatacccagcaactaattccca
ccatcactaataaagagaaactggagcatttcataaataagactgaatat
gctggctcactgttcctcttgatttcaatagtattcgatttagctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149643442_149644617
seq2: B6Ng01-089G21.g_68_1215

seq1  GAATTCCTATTATGTACTCAAAAAGAATACATGAGCCCTGAAAATTTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTATGTACTCAAAAAGAATACATGAGCCCTGAAAATTTAGG  50

seq1  TAAAATACTGCTTTTTCAAGAACTTTAGTTTAATGCAAAAGAGATTAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACTGCTTTTTCAAGAACTTTAGTTTAATGCAAAAGAGATTAATG  100

seq1  CTCATTAGCTAATAACTGATTAGAAATTATTTGTAGGTGGGACATTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTAGCTAATAACTGATTAGAAATTATTTGTAGGTGGGACATTTAAT  150

seq1  TTCATACTGCATAACTCATTTAACTTTTCTAGTGTTTGTAAACTTTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACTGCATAACTCATTTAACTTTTCTAGTGTTTGTAAACTTTAGAA  200

seq1  TTTTGAAAAAGTTAGAAAAATACATTTTTACCAGCCTAGACACATGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAAAGTTAGAAAAATACATTTTTACCAGCCTAGACACATGATTT  250

seq1  ATCAATATTTTTCAGTGTTGAAAAGTATTACAATCTCACATATGGTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATATTTTTCAGTGTTGAAAAGTATTACAATCTCACATATGGTAGAA  300

seq1  ATCTGTATTAACAAATATAACAGTGTTTATAAAGTAACTTATTTCAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTATTAACAAATATAACAGTGTTTATAAAGTAACTTATTTCAAATG  350

seq1  TATTAATTTACATTTACTGGGAATAATTATATATTTTCCATTTTATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTTACATTTACTGGGAATAATTATATATTTTCCATTTTATTTTT  400

seq1  TTAATGCTCTGCTATAGATCATTGGGAGGATAATGATTCACTGTGGTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCTCTGCTATAGATCATTGGGAGGATAATGATTCACTGTGGTCAA  450

seq1  GATTTTTTTTTTAAATTGGTTTTTCCAGACAGGGTTTCTCTGTGTAGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTTTTAAATTGGTTTTTCCAGACAGGGTTTCTCTGTGTAGCCC  500

seq1  TGGCCGTCATGGAACTCACTGTATAGACCAGGCTGGCCTTAAACTCAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGTCATGGAACTCACTGTATAGACCAGGCTGGCCTTAAACTCAGAC  550

seq1  ATCTGCCTGCCTCTGCCTCCAAAGTGCTGGTATTAAAGGCATGTGCCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCTGCCTCTGCCTCCAAAGTGCTGGTATTAAAGGCATGTGCCACC  600

seq1  ACTGCCCCGTTTGCCATCAAGATCTTGGTTATGTTAAACCTATGAGGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCCGTTTGCCATCAAGATCTTGGTTATGTTAAACCTATGAGGACA  650

seq1  GGTAGCTTATTAAGGCATAAAGTTTTTGAGTTTTTTATTTATGGCCTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCTTATTAAGGCATAAAGTTTTTGAGTTTTTTATTTATGGCCTAAT  700

seq1  ACAACTAAAATTCCAATATGCCATCCTAGCTAAGACACACCTAATACAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTAAAATTCCAATATGCCATCCTAGCTAAGACACACCTAATACAAC  750

seq1  AAGTATTTAGGTTTACATTTATGATAGCAACTTTAAAAGGAAAATAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTAGGTTTACATTTATGATAGCAACTTTAAAAGGAAAATAAACA  800

seq1  GAAATAAATAAATGAAAGTAAGATATTTGTTCACCATGATCAAGTAGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAATAAATGAAAGTAAGATATTTGTTCACCATGATCAAGTAGGCT  850

seq1  TCATCCCAGGGATGCAGAGGTGGTTTAATGTACAGAAATCCATCAAGGTA  900
      |||||||||||||||||| ||||||||||||||||||||||||| |||| 
seq2  TCATCCCAGGGATGCAGA-GTGGTTTAATGTACAGAAATCCATC-AGGT-  897

seq1  ATTCACTGTATAAGGAAACTCAGAGGAAAAAAATCATCTAATTAAATGCT  950
      ||||||||||||||| |||||||||| |||||||||||||||||||||||
seq2  ATTCACTGTATAAGG-AACTCAGAGG-AAAAAATCATCTAATTAAATGCT  945

seq1  GAAAAAGATTTCACAAAGTACAACTCCCATTTTGTTAAAAATATTGGAGA  1000
      ||||||||||||||||||||| |||||||||||||| |||||||  ||| 
seq2  GAAAAAGATTTCACAAAGTAC-ACTCCCATTTTGTT-AAAATAT--GAG-  990

seq1  AATCAGAAATTTAAAGTCCATACTTAAACATATTAAAAGCAATACACAGC  1050
      ||||||||||||||||| ||||||| |||||||| |||||||||| ||||
seq2  AATCAGAAATTTAAAGTTCATACTT-AACATATT-AAAGCAATACCCAGC  1038

seq1  AAACTAATACCCAACATCAAACTAAATAAAGAGAAACTGGAAGCAATTCC  1100
       ||||||| |||| ||||  ||| |||||||||||||||| ||| ||| |
seq2  -AACTAATTCCCACCATC--ACT-AATAAAGAGAAACTGG-AGC-ATTTC  1082

seq1  ATTAAAATAAGGGACTGAATAATGCT-GCTCACTGTTCCTCTATGATTTC  1149
      ||  ||||||  |||||||| ||||| ||||||||||||||| |||||||
seq2  AT--AAATAA--GACTGAAT-ATGCTGGCTCACTGTTCCTCT-TGATTTC  1126

seq1  AATATAGTATTTCGAATTCTAGCTGGA  1176
      |  |||||| |||||  | ||||||||
seq2  A--ATAGTA-TTCGA--TTTAGCTGGA  1148