BAC Information

Click to search

BAC

Clone NameB6Ng01-090N17
Chromosome1 (Build37)
Map Location 103,233,012 - 103,233,729
singlet/doubletsinglet
Overlap genenone
Upstream geneC230078M14Rik, LOC100041909
Downstream geneLOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090N17.bB6Ng01-090N17.g
ACCDH903045DH903046
length9941,099
definitionDH903045|Mus musculus domesticus DNA, BAC clone: B6Ng01-090N17, 5' end.DH903046|Mus musculus domesticus DNA, BAC clone: B6Ng01-090N17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttaccttttgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcatgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccatctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccgcccagaag
ctctgcgactctcgcccgtcccagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgcggagtcccagagccaagaaggct
cccgccggcgcctgtgccacaaacctctcaggccaggcaggcccccgtgc
tctcaccaggaaaggtggccggctatctcttaattttctatttaatatgt
tcctacagccttccttccattccattcaatttgttcctttataaaacata
gactcaggactaatctgtgctagatttcgaaggagagggaaaatgacaaa
tattagttttcatggtactttcatatatttaatgtagagtgaattaaaag
aactaactatgctattaaaaatccagtgatgatgtagatatgat
gaattccatcaagactcttctaagaacataaaagtggagtttttaaattt
atcaagaacaaaaatcttcaatgaattagacatttaacacagtacttagg
gtaagctagcatgtacaaacatatatctctatggcttaatgtattagaca
tatttaacacagtccttagggtaaggtactatatacaaacacatatatct
ctatggcttaatggggtacgtcttgctcaaaaatactaagatatgtaatg
agttctattagcatgttggtgtactctctgtctttctgaggcttgaagtg
acaatggccagcttgtattgatatctctctgatagcctcatcatcctaga
gaaagatagggcttccctagagagtgtgtattaaattagggtcctatcta
atacagagcaactacaagccttttctcagcagatgcactgaggtgagagc
ttacttctgtagccatattatcaagaaagacaaagcagtcataggtggga
gtgacctgggtgggaaaggagacaggtaggagaagaggggaacatgacca
ggtattgggggataggaacagaattgaaagccgagctgggcatggtggcg
tacgcctttaatcccagcacttggaaggcagaggcaggtggatttctgag
ttcgaggccagcctggtctaccgagtgagttgcacgacagccaggactgc
acagagaaaccctgtctcaaaaaaaccaaaaaataaaaaaaaaaaaagaa
ttgaaaggcaacagaaagaatgggaagaggtaacctcaggaggagccatg
tctgccctccgaaaggccccaaagcagctgacagagtaagatgcagctat
ttacacccaaccattgacagaaacagtgacactctgtgattagggaaaag
tgaagagctgagagaagcagcagagacttataggagactagcagtctcac
tactggacccctagtctttcagacctgacacaacagcagcaatactgctg
attgagcttcagcacataaaagagctggctgtaccagtgcagagaatgca
ctagcctcaagaactgagtctcaagatagaagctggtgggagtgggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103233012_103233729
seq2: B6Ng01-090N17.b_323_1038

seq1  CTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTTT  50

seq1  CAGGGAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGG  100

seq1  TGAAGGCCCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCCCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGG  150

seq1  AAGGTGGCCAGTTGTCTGGAGTCGAAGATGTCGCCGCCTGAGAAGCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGCCAGTTGTCTGGAGTCGAAGATGTCGCCGCCTGAGAAGCTCTG  200

seq1  TGGCTCTTGTCCGGAAGGAGGCCGGCCATCTGGAGCTGAGGATGGCGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTTGTCCGGAAGGAGGCCGGCCATCTGGAGCTGAGGATGGCGCTG  250

seq1  CCTCAGAAGCTCTGTGGCTCTTGCCGGGAAGGTGGCTGGTTGTCTGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAAGCTCTGTGGCTCTTGCCGGGAAGGTGGCTGGTTGTCTGGAGC  300

seq1  TGAAGATGGCGCCGCCCAGAAGCTCTGCGACTCTCGCCCGTCCCAGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGGCGCCGCCCAGAAGCTCTGCGACTCTCGCCCGTCCCAGAAAC  350

seq1  GGCTGGCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTCCGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTCCGCG  400

seq1  GAGTCCCAGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGCCACAAACCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCCAGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGCCACAAACCTCT  450

seq1  CAGGCCAGGCAGGCCCCCGTGCTCTCACCAGG-AAGGTGGCCGGCTATCT  499
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGGCCAGGCAGGCCCCCGTGCTCTCACCAGGAAAGGTGGCCGGCTATCT  500

seq1  CTTAATTTTCTATTTAATATGTTCCTACAGCCTTCCTTCCATTCCATTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTTTCTATTTAATATGTTCCTACAGCCTTCCTTCCATTCCATTCA  550

seq1  ATTTGTTCCTTTATAAAACATAGACTCAGGACTAATCTGTGCTAGATTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTCCTTTATAAAACATAGACTCAGGACTAATCTGTGCTAGATTTC  600

seq1  GAAGGAGAGGGAAAATGACAAATATTAGTTTTCATGGTACTTTCATATAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGAGGGAAAATGACAAATATTAGTTTTCATGGTACTTTCATATAT  650

seq1  TTAATGTAGAGTGGAATTAAAAGAACTAACTATGCTATTAAAAATCCAGT  699
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTAATGTAGAGT-GAATTAAAAGAACTAACTATGCTATTAAAAATCCAGT  699

seq1  GATTAATGTAGATAATGAT  718
      || | |||||||| |||||
seq2  GA-TGATGTAGAT-ATGAT  716