BAC Information

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BAC

Clone NameB6Ng01-090O22
Chromosome1 (Build37)
Map Location 114,367,536 - 114,368,657
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666578, Dsel, LOC547247, EG626897, LOC666615
Downstream geneLOC666635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090O22.bB6Ng01-090O22.g
ACCDH903101DH903102
length1,1121,187
definitionDH903101|Mus musculus domesticus DNA, BAC clone: B6Ng01-090O22, 5' end.DH903102|Mus musculus domesticus DNA, BAC clone: B6Ng01-090O22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgatttatgggcttggagtctgagaagaccatgaaggggggg
gggcagaaggcagaaagagcaggaagccaccatagggttagttgtgaata
catagccatgaagattagccaaatggaattaaaagtagtcgtgctgtaac
atagcaagttgtaattcaggttattaatgggaattatattttaatatcat
aaaaaagtagatatctgcaaacatctagtgttgactaagggttgtcatta
aaataaaagttgtatgtcttttgtttggggactgcaagttcaaaaatggg
atagaaactcctatttaaaattaaataattatgacaatagttatgtgcac
ctctaatgctagtcctgggaaggacagaggtaggaagatcactagtcttt
gtttgctcttaggctattttaaaataacaacctccaggttctgcagggat
gcttctatcaaaggcttgtgtgagaatgccatttgcaagacagtaggcaa
aaggagacgctcccagtaagccacaactctagcttagtactctaaaataa
tatcagactagaaatggattttccaagtaagagattcagacactgggtct
tgcttaaggtacgaagctaagtttgtttggaaaactgaagccaatctctt
taaacaatatgatttttaagtcagagatatgtaagtgcaaattttcagtg
aacatgttgaatttgagtcttaaaaaagatggctcaattgattttgacaa
agcaaaataaaaaaatacaacaaaaagccaacaaacaaataaacaacaac
aacaacaaacacaaaaacccataggtatatgtataaggaagtggagggga
aagtccagactcctaagtctttaagagggcactgaatctccactttgctt
atatttttgactcatattttgtttttaaaatatttcatgtcagctttact
ttttgacatagtgttatgtgtgatgtgtctatgtgttgtttgtgtgcatg
ggcatacgtgtaccatgtgtgcatgtacatctctgcaggtgtgcctgtgt
gcatgtgtgcacatgaccttggcaccatggtataagtcgaagtacacttg
tgcagtcagatt
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
ggagccaatatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatctttgacaggggag
ctaaaaccatccagtggatgaaagacagcattttcaacaaatggtgctgg
cacaacttgttgttatcatgtagaagaatgcaaatcaatccatactattc
tccttgtattacgtcaaatctaatggatcaagaacttcacaataaacaga
aaacactgaaactatagagagaagtgggtaaaggcttggaagaattgagc
aaggatattcctggacagaaagcaatgctgtcgtagatcggatgacatga
cttatgaaacctcaagggtttctcgtcgcagtgctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_114367536_114368657
seq2: B6Ng01-090O22.b_49_1160

seq1  GAATTCTTTGATTTATGGGCTTGGAGTCTGAGAAGACCATGAAGGGGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATTTATGGGCTTGGAGTCTGAGAAGACCATGAAGGGGGGG  50

seq1  GGGCAGAAGGCAGAAAGAGCAGGAAGCCACCATAGGGTTAGTTGTGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAAGGCAGAAAGAGCAGGAAGCCACCATAGGGTTAGTTGTGAATA  100

seq1  CATAGCCATGAAGATTAGCCAAATGGAATTAAAAGTAGTCGTGCTGTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCATGAAGATTAGCCAAATGGAATTAAAAGTAGTCGTGCTGTAAC  150

seq1  ATAGCAAGTTGTAATTCAGGTTATTAATGGGAATTATATTTTAATATCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAGTTGTAATTCAGGTTATTAATGGGAATTATATTTTAATATCAT  200

seq1  AAAAAAGTAGATATCTGCAAACATCTAGTGTTGACTAAGGGTTGTCATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTAGATATCTGCAAACATCTAGTGTTGACTAAGGGTTGTCATTA  250

seq1  AAATAAAAGTTGTATGTCTTTTGTTTGGGGACTGCAAGTTCAAAAATGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAGTTGTATGTCTTTTGTTTGGGGACTGCAAGTTCAAAAATGGG  300

seq1  ATAGAAACTCCTATTTAAAATTAAATAATTATGACAATAGTTATGTGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAACTCCTATTTAAAATTAAATAATTATGACAATAGTTATGTGCAC  350

seq1  CTCTAATGCTAGTCCTGGGAAGGACAGAGGTAGGAAGATCACTAGTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATGCTAGTCCTGGGAAGGACAGAGGTAGGAAGATCACTAGTCTTT  400

seq1  GTTTGCTCTTAGGCTATTTTAAAATAACAACCTCCAGGTTCTGCAGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTCTTAGGCTATTTTAAAATAACAACCTCCAGGTTCTGCAGGGAT  450

seq1  GCTTCTATCAAAGGCTTGTGTGAGAATGCCATTTGCAAGACAGTAGGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTATCAAAGGCTTGTGTGAGAATGCCATTTGCAAGACAGTAGGCAA  500

seq1  AAGGAGACGCTCCCAGTAAGCCACAACTCTAGCTTAGTACTCTAAAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGACGCTCCCAGTAAGCCACAACTCTAGCTTAGTACTCTAAAATAA  550

seq1  TATCAGACTAGAAATGGATTTTCCAAGTAAGAGATTCAGACACTGGGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGACTAGAAATGGATTTTCCAAGTAAGAGATTCAGACACTGGGTCT  600

seq1  TGCTTAAGGTACGAAGCTAAGTTTGTTTGGAAAACTGAAGCCAATCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAAGGTACGAAGCTAAGTTTGTTTGGAAAACTGAAGCCAATCTCTT  650

seq1  TAAACAATATGATTTTTAAGTCAGAGATATGTAAGTGCAAATTTTCAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAATATGATTTTTAAGTCAGAGATATGTAAGTGCAAATTTTCAGTG  700

seq1  AACATGTTGAATTTGAGTCTTAAAAAAGATGGCTCAATTGATTTTGACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTTGAATTTGAGTCTTAAAAAAGATGGCTCAATTGATTTTGACAA  750

seq1  AGCAAAATAAAAAAATACAACAAAAAGCCAACAAACAAATAAACAACAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATAAAAAAATACAACAAAAAGCCAACAAACAAATAAACAACAAC  800

seq1  AACAACAAACACAAAAACCCATAGGTATATGTATAAGGAAGTGGAGGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAAACACAAAAACCCATAGGTATATGTATAAGGAAGTGGAGGGGA  850

seq1  AAGTCCAGACTCCTAAGTCTTTAAGAGGGCACTGAATCTCCACTTTGCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCAGACTCCTAAGTCTTTAAGAGGGCACTGAATCTCCACTTTGCTT  900

seq1  ATATTTTTGACTCATATTTTGTTTTTTAAAATATTTCATGTCAGCTTTAC  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATATTTTTGACTCATATTTTG-TTTTTAAAATATTTCATGTCAGCTTTAC  949

seq1  TTTTTGACATAGTGTTTATTGTGTGAATGTGTCTATGTGTTTGTTTGTGT  1000
      ||||||||||||||||   |||||| ||||||||||||| ||||||||||
seq2  TTTTTGACATAGTGTT--ATGTGTG-ATGTGTCTATGTG-TTGTTTGTGT  995

seq1  GCATGGGCATACGTGTACCCATGTGTGCATGTACATCTCTGCAGGTGTGC  1050
      ||||||||||||||||| ||||||||||||||||||||||||||||||| 
seq2  GCATGGGCATACGTGTA-CCATGTGTGCATGTACATCTCTGCAGGTGTG-  1043

seq1  CCTGTGTGCATGTGTGCACATGACCCTTGGCACCCATGTATAAGTCAGAG  1100
      ||||||||||||||||||||||| ||||||||||   |||||||||  ||
seq2  CCTGTGTGCATGTGTGCACATGA-CCTTGGCACCATGGTATAAGTCGAAG  1092

seq1  TACAATTTGTGCAGTCAAGATT  1122
      ||| | |||||||||| |||||
seq2  TAC-ACTTGTGCAGTC-AGATT  1112