BAC Information

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BAC

Clone NameB6Ng01-091B06
Chromosome1 (Build37)
Map Location 113,344,657 - 113,345,676
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041429, EG626652, Cdh19
Downstream geneEG666578, Dsel, LOC547247, EG626897, LOC666615
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091B06.bB6Ng01-091B06.g
ACCDH903209DH903210
length1,0231,197
definitionDH903209|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B06, 5' end.DH903210|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttaagctctgcaccccattttttaatggggttgattcttt
gggagtcaaccttcttgaattctttatatatattgaatattaaataaaaa
atattttgactatttagcagaataatatttgtaggttctcccctaagggc
tattatctaactagctacaggttattaaccccaatagtagtgctagttaa
gagtgaagacttgtaagttgttgatgttgattaggagctgaaattatgat
tttagtattagaacaagataaaacaagcatataactgactatatatatat
atatatatatatatatatatatatatatatatatggagacctacatatag
tagcttgtcaagtagaaagaaatattttccaaaatatctaacatgcttta
tgtgttcacagaaatctgcaaaaattctgcttttgtataaatgtaggtta
attagataacaaaataaaaacaagtgctatccttcattgcatttgtggtc
cataacactaaatacacaaataaattttaacacagaaatataagaaaata
agtaatataagacagtttattaatttccattatattttaaaatgtatcat
aattacagatttatttaaaagttactagaaagggataaacttgatattat
ttaaatgtgagtgtttttttaatacctactctatattgcttagtgtctct
agacttttaactgaattaataaattttgtaaaataataaattataggctc
aaattctgaaaacaatataatataaataatttcagagaataactgattga
aatatgtaaaatatattttcagtgtgtgattcatcatcaacaagtcactt
tttctacaggttcaaaaagtattcaaatctgttatgcctgctgatttcta
tatcattgggaaacaaacattgctcctatttcaattagacataaaaatgt
ttagtttaaaaattacttagttttccaattacacggttatcatacccatg
gatactccttgtttcctttctcc
gaattcctgatctttccaagacttttatcatgcatgggtgttggatcttg
gtgaatgctttttccacatctaaggagatgatcatgtggtttttgtattt
gagtttgtttatataatggagtacattgatggatttccgtatattaaacc
atcccagaatccctggaataaaatctacttggtcaggatggatgattgct
ttaatgtgtttgttcttgtaattggttagcaagaattttattgagtattt
ttgcatctatattcataagggaaattggtctgaagttctctttctttgtt
gggtctttttgtggtataggtatcagagtaattgtggctccatagaatga
gttgggttgagttccttctacttctattttgtaaaatagttgctgcagaa
ctgtaattagatcttctttgaaggtctggtagaattctgcactaaaccca
tctggtcctgtgcttatttatttttatttttttggctgggagactattaa
tgactgcttgtatttctttagaggatatgggacttttaaggtcgttaact
tgatcctgatttaactttggtacctggtatctgtctataagtatgtccat
ttcatccaggttttccagttttgttgagtatagccttttgtagaaggatt
tgatggtgttttggatttcttcaggatttgttgttatctctcccttttca
tttctgattttgttaattaggatgttgtccctgtgccctttagtgagtct
agctaagggtttatctatcttgttgattttctcaaagaaccaactccacc
tttggttaattctttggttagttcttcttgtttccacttggttgatttca
cccctgagtttgattatttcctgacatctactcctcctgggtgaattttc
tcctttttttctagagcttttagatgtgtgtcagctgctagtgtgtgctc
tctcattttctttttggaggcactcagagctatgagtttcctctagaatg
ctttcattgtgtcccatagtttgggtatgttggggctccatttgcattaa
cctaaacgcgtaattcattcttattcttcctgatcaagtgcattgaaaag
agttaatcagttccctgatttgccttcctatttatgtgtatgagatggcc
tgatcagggaatcggatagagagtcgggacaatttcaattgtcctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_113344657_113345676
seq2: B6Ng01-091B06.b_46_1068

seq1  GAATTCTTTGTTAAGCTCTGCACCCCATTTTTTAATGGGGTTGATTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTAAGCTCTGCACCCCATTTTTTAATGGGGTTGATTCTTT  50

seq1  GGGAGTCAACCTTCTTGAATTCTTTATATATATTGAATATTAAATAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCAACCTTCTTGAATTCTTTATATATATTGAATATTAAATAAAAA  100

seq1  ATATTTTGACTATTTAGCAGAATAATATTTGTAGGTTCTCCCCTAAGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGACTATTTAGCAGAATAATATTTGTAGGTTCTCCCCTAAGGGC  150

seq1  TATTATCTAACTAGCTACAGGTTATTAACCCCAATAGTAGTGCTAGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCTAACTAGCTACAGGTTATTAACCCCAATAGTAGTGCTAGTTAA  200

seq1  GAGTGAAGACTTGTAAGTTGTTGATGTTGATTAGGAGCTGAAATTATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAAGACTTGTAAGTTGTTGATGTTGATTAGGAGCTGAAATTATGAT  250

seq1  TTTAGTATTAGAACAAGATAAAACAAGCATATAACTGACTATATATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTATTAGAACAAGATAAAACAAGCATATAACTGACTATATATATAT  300

seq1  ATATATATATATATATATATATATATATATATATGGAGACCTACATATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATGGAGACCTACATATAG  350

seq1  TAGCTTGTCAAGTAGAAAGAAATATTTTCCAAAATATCTAACATGCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGTCAAGTAGAAAGAAATATTTTCCAAAATATCTAACATGCTTTA  400

seq1  TGTGTTCACAGAAATCTGCAAAAATTCTGCTTTTGTATAAATGTAGGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCACAGAAATCTGCAAAAATTCTGCTTTTGTATAAATGTAGGTTA  450

seq1  ATTAGATAACAAAATAAAAACAAGTGCTATCCTTCATTGCATTTGTGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATAACAAAATAAAAACAAGTGCTATCCTTCATTGCATTTGTGGTC  500

seq1  CATAACACTAAATACACAAATAAATTTTAACACAGAAATATAAGAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACACTAAATACACAAATAAATTTTAACACAGAAATATAAGAAAATA  550

seq1  AGTAATATAAGACAGTTTATTAATTTCCATTATATTTTAAAATGTATCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATATAAGACAGTTTATTAATTTCCATTATATTTTAAAATGTATCAT  600

seq1  AATTACAGATTTATTTAAAAGTTACTAGAAAGGGATAAACTTGATATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAGATTTATTTAAAAGTTACTAGAAAGGGATAAACTTGATATTAT  650

seq1  TTAAATGTGAGTGTTGTTTTAATACCTACTCTATATTGCTTAGTGTCTCT  700
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTAAATGTGAGTGTTTTTTTAATACCTACTCTATATTGCTTAGTGTCTCT  700

seq1  AGAC-TTTAACTGAATTAATAAATTTGTAAAAATAAT-AATTATAGGCTC  748
      |||| |||||||||||||||||||||   |||||||| ||||||||||||
seq2  AGACTTTTAACTGAATTAATAAATTTTGTAAAATAATAAATTATAGGCTC  750

seq1  AAATTCATGAAAACAATATAATATAAATAA-TTCAGAGAATAACTGATTG  797
      |||||| ||||||||||||||||||||||| |||||||||||||||||||
seq2  AAATTC-TGAAAACAATATAATATAAATAATTTCAGAGAATAACTGATTG  799

seq1  AAATATGTAAAATATATTTTCAGTGTGTGATTTCATCATCAACAAGTCAC  847
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAATATGTAAAATATATTTTCAGTGTGTGA-TTCATCATCAACAAGTCAC  848

seq1  -TTTTCTACAGGTTCAAAAAGTTATCAAATCTGTTATGCCTGCTGATTTC  896
       |||||||||||||||||||||  ||||||||||||||||||||||||||
seq2  TTTTTCTACAGGTTCAAAAAGTATTCAAATCTGTTATGCCTGCTGATTTC  898

seq1  TATATCATTGGGAAACAAACATTGCTCTTATTTCAATTAGACAT-AAAAT  945
      ||||||||||||||||||||||||||| |||||||||||||||| |||||
seq2  TATATCATTGGGAAACAAACATTGCTCCTATTTCAATTAGACATAAAAAT  948

seq1  GTTTAGTTTAAAAATTACTTAGTTTTCCAATTCACACAGTTAATCATACC  995
      |||||||||||||||||||||||||||||||| |||| ||| ||||||||
seq2  GTTTAGTTTAAAAATTACTTAGTTTTCCAATT-ACACGGTT-ATCATACC  996

seq1  CATGAATACATCTTGTTTC--TTCTCC  1020
      |||| ||||  ||||||||  ||||||
seq2  CATGGATACTCCTTGTTTCCTTTCTCC  1023