BAC Information

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BAC

Clone NameB6Ng01-091E03
Chromosome1 (Build37)
Map Location 102,494,018 - 102,494,971
singlet/doubletsinglet
Overlap genenone
Upstream geneC230078M14Rik, LOC633295, EG666200
Downstream geneLOC100041909, LOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091E03.bB6Ng01-091E03.g
ACCDH903335DH903336
length9481,151
definitionDH903335|Mus musculus domesticus DNA, BAC clone: B6Ng01-091E03, 5' end.DH903336|Mus musculus domesticus DNA, BAC clone: B6Ng01-091E03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgatatggatgaagggtcaggagtttgttgatgagattcaagc
tagatatcctcatctcttgagcagcttttgtccactgcagacaccccagg
ggaagaaaatgctgacttgtacatttcagccctggagaaagttcagaaga
tgtcatcatgaagagcatgccagtggctaaagtttagaaggattttaaag
ctgatagtggtaataaaatgttaaaaaataaagtagtttgaaaatactcc
agggaatgaggtaggaataactacagttattttacaaacagtaatattag
gagaaatgttgctgcaagaaaaattatcacttctcattgataacaactca
ttctatttcaataaagctcactctgatatttatgtacttaattatgtgcc
atgtttcaaatttatgataaaatattgatagtctaacatgaacttattaa
cagatatatatatttatatttatatatatatatatatatatatatatata
tatatatttaaatatgtatatatatttctcattatatgaccatatatatg
cctaaatatgtcaccatattccacagaactagttatggatgattgggagt
catacagtggctcacgccaggtgttaacttatagttaagattataaatat
taattatagataggacatataacaactcaaatactagaattaagttatgc
atattattttcttttgcaaataaagcacgccactactaattaatagaaaa
gtgtggttgttaagccttattaggttctacgttattttatagggagaaac
acaggacaatcaccttataaggacttattaattaataataaaatgtacat
atagcttagcaaatttataaataaagtaatccggatggtttcctgtgctc
gtaatccagcattcaaaaatctgaacctgtatatatctgtgaatccag
gaattctcacctgaggaataacgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatggaaatcaaaacaaccctgagat
ttcatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctgtaaatctgtctggcggttcctca
gaaaattggacatagtgcttactactggaggatccagcaatacctctcct
gggcatatatccagaagatgccccaactagtaagaaggacacatgctcca
ctatgttcatagcagccttatttataatagccagaagctggaaagaaccc
agatgcccctcaacagaggaatggatacagaaaatgtggtacatctacac
aatggagtactactcagctattaaaaagaatgaatttatgaaattcctag
gcaaatggatggacctggagggcatcatcctgagtgaggtaacacattca
caaaggaactcacagaatatgtactcactgataagttgatattagcccaa
aacctaggatacccaagatataagatacaatttcctaaacacatgaaact
caagaaaaatgaagactgaagtgtggacactatgcccctccttagaagtg
ggaacaaaacacccttggaaggagttacagagacaaagtttggagctgag
atgaaaggatggaccatgtagagactgccatatctagggatccaccccat
aatcagcatccaaacgctgacaccattgcatacactagcaagattttatc
gaaaggacccagatgtagctgtctcttgtgggactatgctggggcctagc
aaacacagaagtggatgctcacagtcagctaatgaatggatcacagtctc
caatgaggagctagagaagtacccagagctaaagggatctgcaccctata
ggtggattactttatgactaccagtacccagagctctgactctagcttca
tgtgtatcaaaagatgctagtcgcatcactgaagaagtccattggacacg
cacttttatgccagtccggaacgcagccaaaggatggaagggaaggagat
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102494018_102494971
seq2: B6Ng01-091E03.b_48_995

seq1  GAATTCTTGATATGGATGAAGGGTCAGGAGTTTGTTGATGAGATTCAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATATGGATGAAGGGTCAGGAGTTTGTTGATGAGATTCAAGC  50

seq1  TAGATATCCTCATCTCTTGAGCAGCTTTTGTCCACTGCAGACACCCCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATCCTCATCTCTTGAGCAGCTTTTGTCCACTGCAGACACCCCAGG  100

seq1  GGAAGAAAATGCTGACTTGTACATTTCAGCCCTGGAGAAAGTTCAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAAATGCTGACTTGTACATTTCAGCCCTGGAGAAAGTTCAGAAGA  150

seq1  TGTCATCATGAAGAGCATGCCAGTGGCTAAAGTTTAGAAGGATTTTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCATGAAGAGCATGCCAGTGGCTAAAGTTTAGAAGGATTTTAAAG  200

seq1  CTGATAGTGGTAATAAAATGTTAAAAAATAAAGTAGTTTGAAAATACTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAGTGGTAATAAAATGTTAAAAAATAAAGTAGTTTGAAAATACTCC  250

seq1  AGGGAATGAGGTAGGAATAACTACAGTTATTTTACAAACAGTAATATTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATGAGGTAGGAATAACTACAGTTATTTTACAAACAGTAATATTAG  300

seq1  GAGAAATGTTGCTGCAAGAAAAATTATCACTTCTCATTGATAACAACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATGTTGCTGCAAGAAAAATTATCACTTCTCATTGATAACAACTCA  350

seq1  TTCTATTTCAATAAAGCTCACTCTGATATTTATGTACTTAATTATGTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTCAATAAAGCTCACTCTGATATTTATGTACTTAATTATGTGCC  400

seq1  ATGTTTCAAATTTATGATAAAATATTGATAGTCTAACATGAACTTATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCAAATTTATGATAAAATATTGATAGTCTAACATGAACTTATTAA  450

seq1  CAGATATATATATTTATATTTATATATATATATATATATATATATATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATATATATTTATATTTATATATATATATATATATATATATATATA  500

seq1  TATATATTTTAATCAATCACTACCATTCTCATTAAAAGACCACATAGAGG  550
      ||||||||| |||   |   ||   ||||||||| | ||||| ||| | |
seq2  TATATATTTAAATATGTATATATATTTCTCATTATATGACCATATATATG  550

seq1  CCAAAAGATGTCACCATATTCCACAGAACTAGTTATGGATGATTGTGAGT  600
      || ||| |||||||||||||||||||||||||||||||||||||| ||||
seq2  CCTAAATATGTCACCATATTCCACAGAACTAGTTATGGATGATTGGGAGT  600

seq1  CATACAGTGGCTCACACCATGTGTTAACTTATAATTAAGATTATAAATAT  650
      ||||||||||||||| ||| ||||||||||||| ||||||||||||||||
seq2  CATACAGTGGCTCACGCCAGGTGTTAACTTATAGTTAAGATTATAAATAT  650

seq1  AAATTATAGATAGGACATATAACAACTCAAATACTAGAATTAAGTTATGC  700
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATAGATAGGACATATAACAACTCAAATACTAGAATTAAGTTATGC  700

seq1  ATATAATTT--CTTTGCAAATAAAGCAGGCCACTACTAATTAATAG-AAA  747
      |||| ||||   ||||||||||||||| |||||||||||||||||| |||
seq2  ATATTATTTTCTTTTGCAAATAAAGCACGCCACTACTAATTAATAGAAAA  750

seq1  GTGTGGTTGTTAAGCCTTATTAGGTTCATACGTTATTATTATA-GGAGAA  796
      ||||||||||||||||||||||||||| ||||||||| ||||| ||||||
seq2  GTGTGGTTGTTAAGCCTTATTAGGTTC-TACGTTATT-TTATAGGGAGAA  798

seq1  ACACAGGACAATCACCTTATAAGGAACTTATTAATTAATAATAAAAATGT  846
      |||||||||||||||||||||||| ||||||||||||||||| |||||||
seq2  ACACAGGACAATCACCTTATAAGG-ACTTATTAATTAATAAT-AAAATGT  846

seq1  ACATATTGTCTTAGCTAAGTATATAATTAAAGTAATCCAGGAATGGTTTC  896
      |||||| | |||||| || | ||||| |||||||||||  | ||||||||
seq2  ACATATAG-CTTAGC-AAATTTATAAATAAAGTAATCC--GGATGGTTTC  892

seq1  CTGTGCTCTTAATCCCAGCATTCAGAAATCTGAGCCTGTATATATCTGTG  946
      |||||||| |||| |||||||||| |||||||| ||||||||||||||||
seq2  CTGTGCTCGTAAT-CCAGCATTCAAAAATCTGAACCTGTATATATCTGTG  941

seq1  AGCTCCAG  954
      |  |||||
seq2  A-ATCCAG  948