BAC Information

Click to search

BAC

Clone NameB6Ng01-091K21
Chromosome1 (Build37)
Map Location 104,060,000 - 104,061,033
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056, LOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091K21.bB6Ng01-091K21.g
ACCDH903640DH903641
length1,0301,209
definitionDH903640|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K21, 5' end.DH903641|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggcccataactaaacatagtaaaagcaatatacagcaaatca
gtagccaacatgaaactaaatggttgaaactagaagcaatcccactaaaa
tcagggactagacaaggttacccatgctcactgtctattcagtattgtac
ttgaagttctagctagagtaattagacaacaaagggaggaataaaattgt
gattcttttcttctaaactaaaagcgacatttatttgttttttgttattt
tatctgaaacattaaccttcctctttttcatatatacatgtatgttctta
tatgcatggatgttcacacaggtgtggtcctgtgtgtggaagtctgtggt
tgacttcaggtgtctttttctctatagactcattatatacataggcagta
tctttgtgtctagtctagctaaacagaatgttctgcagggctctaagaat
atcatcacatctccctggcttttttgtgggtcctagggatgttaattcca
ttcctcatcatttgttggtaagcactgtacctgctgagccatgtccccaa
gctccaaactccagcctctaaaaatatctccaggtagcacctcttttcct
catagtttcctgacagcttttacttacgggaaattcagatatatgaagct
acagccaacaagaaagttctattttataacttagagcagtttattactcc
caatctgataattactccctgctcagacaagtctaaactttgctattttt
tttttctatatttgaatgtttttagaatcttgaattgaggttgtttagca
ctctcaggctagaatacagactcctcagccataatcccacacttagcaac
cttggacaagtgacattgttgagtttgggcaagatatgtaaagtgtctga
tatatgtaaacaaataacttggcagtatatccttagtcaatatcatcatg
aatgtattgccagtttgactaaatctagagttttctgaaaggggagcctc
tgaacatgtctgtaggtaatggattgattg
gaattccaggcctatacctaaacataataaaaacaatttactgcaaacca
atagccaatatgaaattaaatggagacatacatttggagaaatttcacta
aaatcaagaacaagaaaaggatgcgtactctccccatatctatttaatat
tgtaattgaagtgctaggtagaacaataagacaacaaaaaggtatcaagg
agatacaaattggcaaagaagaaaaaaggtatcactctttgcagatgata
tgatggtagacataagtgaccacaaaaatcctaccagagaacttctgcag
ctgataaacaacttcagcaaagtggctggatataaaattaactcaaataa
gtcagtagccttcttctatacaaatgataaacaggccaaggaagaattag
gaaaacaactcccttacaattgccacaaataatataaaatatcttgggat
aactctaaccaaacaaatgaaagatctgtatggccataacttcaagttgc
tcaagaaataaattgaagatctcagaaaataaagagatctcccatgctca
tggattggcagaattaacatagtaaaaatggccatcctaccaaaggcaat
ctatggaatcaatgcaatccccattaaaatctcaacacaattcttcaaag
acacagaaagagcaatgctcaaattcatctggatagtcaaaaacccagaa
tagcaaaaataattattaaaaatagaagaaaagctggaggaatcgccatc
cctgacctcaagctttactacagagcaacagtgataaaaactatgtgata
ctggtacatagacagacacattgatcaatgaaatagaattgaagactgag
aaacaaaaccacacactttagaacacttgagcttttacaaagaagccaaa
catataatatggaaaagaaacatattaaataaatagtacttgtttactgg
ctgtctatatgtagaaaatgaaaatagttcctcatttatcaccttgcaca
aagctcaaatccaagtggatcagaactcacataaaagtgacaaactgagg
ctaatataagagaaagtgggggaagagcttgactcatgacgggactttct
aacaaactccagtgtgcatgcctagatacagactgataagtggtatcatg
taatggaaccatgaattgaaggcttctgtaaggcaaagacaatcgccaaa
ctaactgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_104060000_104061033
seq2: B6Ng01-091K21.b_48_1077 (reverse)

seq1  CAATCAATCCAATACCCTACAGACATGTTCAGAGGCTCACCTTTCAGATA  50
      ||||||||||| || ||||||||||||||||||||||| ||||||||| |
seq2  CAATCAATCCATTA-CCTACAGACATGTTCAGAGGCTCCCCTTTCAGAAA  49

seq1  ACTCTAGATTTAGTCAAACTGGCAATTAACATTCATGATGATATTGACTA  100
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  ACTCTAGATTTAGTCAAACTGGCAAT--ACATTCATGATGATATTGACTA  97

seq1  AGGATATACCTGCCAAGTTATTTGTTTACATATATCAGACACTTTACATA  150
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATA-CTGCCAAGTTATTTGTTTACATATATCAGACACTTTACATA  146

seq1  TCTTGCCCAAACTCAACAATGTCACTTGTCCAAGGTTGCTAAGTGTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCCAAACTCAACAATGTCACTTGTCCAAGGTTGCTAAGTGTGGGA  196

seq1  TTATGGCTGAGGAGTCTGTATTCTAGCCTGAGAGTGCTAAACAACCTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCTGAGGAGTCTGTATTCTAGCCTGAGAGTGCTAAACAACCTCAA  246

seq1  TTCAAGATTCTAAAAACATTCAAATATAGAAAAAAAAAATAGCAAAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGATTCTAAAAACATTCAAATATAGAAAAAAAAAATAGCAAAGTTT  296

seq1  AGACTTGTCTGAGCAGGGAGTAATTATCAGATTGGGAGTAATAAACTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGTCTGAGCAGGGAGTAATTATCAGATTGGGAGTAATAAACTGCT  346

seq1  CTAAGTTATAAAATAGAACTTTCTTGTTGGCTGTAGCTTCATATATCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTATAAAATAGAACTTTCTTGTTGGCTGTAGCTTCATATATCTGA  396

seq1  ATTTCCCGTAAGTAAAAGCTGTCAGGAAACTATGAGGAAAAGAGGTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCGTAAGTAAAAGCTGTCAGGAAACTATGAGGAAAAGAGGTGCTA  446

seq1  CCTGGAGATATTTTTAGAGGCTGGAGTTTGGAGCTTGGGGACATGGCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGATATTTTTAGAGGCTGGAGTTTGGAGCTTGGGGACATGGCTCA  496

seq1  GCAGGTACAGTGCTTACCAACAAATGATGAGGAATGGAATTAACATCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTACAGTGCTTACCAACAAATGATGAGGAATGGAATTAACATCCCT  546

seq1  AGGACCCACAAAAAAGCCAGGGAGATGTGATGATATTCTTAGAGCCCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCACAAAAAAGCCAGGGAGATGTGATGATATTCTTAGAGCCCTGC  596

seq1  AGAACATTCTGTTTAGCTAGACTAGACACAAAGATACTGCCTATGTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATTCTGTTTAGCTAGACTAGACACAAAGATACTGCCTATGTATAT  646

seq1  AATGAGTCTATAGAGAAAAAGACACCTGAAGTCAACCACAGACTTCCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTCTATAGAGAAAAAGACACCTGAAGTCAACCACAGACTTCCACA  696

seq1  CACAGGACCACACCTGTGTGAACATCCATGCATATAAGAACATACATGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGACCACACCTGTGTGAACATCCATGCATATAAGAACATACATGTA  746

seq1  TATATGAAAAAGAGGAAGGTTAATGTTTCAGATAAAATAACAAAAAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAAAAAGAGGAAGGTTAATGTTTCAGATAAAATAACAAAAAACAA  796

seq1  ATAAATGTCGCTTTTAGTTTAGAAGAAAAGAATCACAATTTTATTCCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGTCGCTTTTAGTTTAGAAGAAAAGAATCACAATTTTATTCCTCC  846

seq1  CTTTGTTGTCTAATTACTCTAGCTAGAACTTCAAGTACAATACTGAATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTGTCTAATTACTCTAGCTAGAACTTCAAGTACAATACTGAATAG  896

seq1  ACAGTGAGCATGGGTAACCTTGTCTAGTCCCTGATTTTAGTGGGATTGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAGCATGGGTAACCTTGTCTAGTCCCTGATTTTAGTGGGATTGCT  946

seq1  TCTAGTTTCAACCATTTAGTTTCATGTTGGCTACTGATTTGCTGTATATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTTCAACCATTTAGTTTCATGTTGGCTACTGATTTGCTGTATATT  996

seq1  GCTTTTACTATGTTTAGTTATGGGCCTTGAATTC  1034
      ||||||||||||||||||||||||||||||||||
seq2  GCTTTTACTATGTTTAGTTATGGGCCTTGAATTC  1030