BAC Information

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BAC

Clone NameB6Ng01-092J18
Chromosome1 (Build37)
Map Location 149,714,951 - 149,844,439
singlet/doubletdoublet
Overlap genenone
Upstream geneB830045N13Rik
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092J18.bB6Ng01-092J18.g
ACCDH904324DH904325
length2381,011
definitionDH904324|Mus musculus domesticus DNA, BAC clone: B6Ng01-092J18, 5' end.DH904325|Mus musculus domesticus DNA, BAC clone: B6Ng01-092J18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,844,202 - 149,844,439)(149,714,951 - 149,715,827)
sequence
tttgttcagttctgagccccattttttaatggggttatttgattttctga
agtccaccttcttgagttctttatatttgttggatattagtcccctatct
gatttaggataggtaaaggtgtttatagtgaaattagaaacatgtaaatt
gtaacctaaacacaatccacaaatactgagaacattttaataaaacttaa
atactttataacttgggagagtaggggagtgggggggg
gaattctatggggattttacagagggtatatcaatgcttgaaaggatagg
ttgtgagttgctgtgaataattgtcagtcataatttgttaagtatgcaca
aagaaaaaacaacaagaagaaaaatttagatatactggtgttgtagatca
gacttgtgccaaagagctgatgcccctaattaacaggaggtaatctaata
ataattttacctcttttctggctcctggcattattcaggaatttctttcc
tttcccctctatcttattttattttttttctagttttaaggagttgaaag
ggtgaaagtaaagggttaaagaagtgtggaagaaagaacccacaaagtag
acaatttttatcctactattttgctgagtgtgtattcagtcatataagtt
ttcttgtccttaatgccttttatgcttagaattatatcacctgtaaataa
ggaaacagttctgtaaataaggaaactgcttcttctgttcctatgagttt
tccctttatattatttttgtcttattattctagctaaaatagcaagcact
atattaaactgaaatggaaaagctgataatttttatcttgttcctaattt
gagtgtatattatttgggcttcacaccatgtatttgagtcctaggaccaa
aaaaagaaaaaaaaatggacttgaaactgacttgaaatctgcagtactac
tggtaagctttcatagtgctggaaggtgctaatcatacccatggaggaga
aaagttgatgagagccttagccagccttgatttctgcttgttaaataatg
gcattttttcaacatatgagtaattggaaaatagtttcacagttatagac
aagagacagttttcagtgtgctcattctacactgtggattcctcaaattg
aactcacattctcagccttgatgtcaagcacctttccctgctaagccatc
tctctggcacaaaattatgtttttaaatgaaataatatttatatatatat
atatgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149844202_149844439
seq2: B6Ng01-092J18.b_52_289 (reverse)

seq1  CCCCCCCCACTCCCCTACTCTCCCAAGTTATAAAGTATTTAAGTTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCACTCCCCTACTCTCCCAAGTTATAAAGTATTTAAGTTTTATT  50

seq1  AAAATGTTCTCAGTATTTGTGGATTGTGTTTAGGTTACAATTTACATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTCTCAGTATTTGTGGATTGTGTTTAGGTTACAATTTACATGTT  100

seq1  TCTAATTTCACTATAAACACCTTTACCTATCCTAAATCAGATAGGGGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTCACTATAAACACCTTTACCTATCCTAAATCAGATAGGGGACT  150

seq1  AATATCCAACAAATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCAACAAATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAA  200

seq1  ATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAA  238
      ||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAA  238

seq1: chr1_149714951_149715827
seq2: B6Ng01-092J18.g_204_1079

seq1  TGGTGTTGTAGATCAGACTTGTGCCAAAGAGCTGATGCCCCTAATTAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTGTAGATCAGACTTGTGCCAAAGAGCTGATGCCCCTAATTAACA  50

seq1  GGAGGTAATCTAATAATAATTTTACCTCTTTTCTGGCTCCTGGCATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTAATCTAATAATAATTTTACCTCTTTTCTGGCTCCTGGCATTATT  100

seq1  CAGGAATTTCTTTCCTTTCCCCTCTATCTTATTTTATTTTTTTTCTAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATTTCTTTCCTTTCCCCTCTATCTTATTTTATTTTTTTTCTAGTT  150

seq1  TTAAGGAGTTGAAAGGGTGAAAGTAAAGGGTTAAAGAAGTGTGGAAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGAGTTGAAAGGGTGAAAGTAAAGGGTTAAAGAAGTGTGGAAGAAA  200

seq1  GAACCCACAAAGTAGACAATTTTTATCCTACTATTTTGCTGAGTGTGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCACAAAGTAGACAATTTTTATCCTACTATTTTGCTGAGTGTGTAT  250

seq1  TCAGTCATATAAGTTTTCTTGTCCTTAATGCCTTTTATGCTTAGAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCATATAAGTTTTCTTGTCCTTAATGCCTTTTATGCTTAGAATTAT  300

seq1  ATCACCTGTAAATAAGGAAACAGTTCTGTAAATAAGGAAACTGCTTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTGTAAATAAGGAAACAGTTCTGTAAATAAGGAAACTGCTTCTTC  350

seq1  TGTTCCTATGAGTTTTCCCTTTATATTATTTTTGTCTTATTATTCTAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTATGAGTTTTCCCTTTATATTATTTTTGTCTTATTATTCTAGCT  400

seq1  AAAATAGCAAGCACTATATTAAACTGAAATGGAAAAGCTGATAATTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGCAAGCACTATATTAAACTGAAATGGAAAAGCTGATAATTTTTA  450

seq1  TCTTGTTCCTAATTTGAGTGTATATTATTTGGGCTTCACACCATGTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTCCTAATTTGAGTGTATATTATTTGGGCTTCACACCATGTATTT  500

seq1  GAGTCCTAGGACCAAAAAAAGAAAAAAAAATGGACTTGAAACTGACTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTAGGACCAAAAAAAGAAAAAAAAATGGACTTGAAACTGACTTGA  550

seq1  AATCTGCAGTACTACTGGTAAGCTTTCATAGTGCTGGAAGGTGCTAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCAGTACTACTGGTAAGCTTTCATAGTGCTGGAAGGTGCTAATCA  600

seq1  TACCCATGGAGGAGAAAAGTTGATGAGAGCCTTAGCCAGCCTTGATTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCATGGAGGAGAAAAGTTGATGAGAGCCTTAGCCAGCCTTGATTTCT  650

seq1  GCTTGTTAAAATAATGGCATTTTTTCAACATATGAGTAATTGGAAAATAG  700
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTT-AAATAATGGCATTTTTTCAACATATGAGTAATTGGAAAATAG  699

seq1  TTTCACAGTTATAGACAAGAGACAGTTTTCAGTGTGCTCATTCTACACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGTTATAGACAAGAGACAGTTTTCAGTGTGCTCATTCTACACTG  749

seq1  TGGATTCCTCAAATTGAACTCACATTCTCAGCCTTGATGTCAAGCACCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCCTCAAATTGAACTCACATTCTCAGCCTTGATGTCAAGCACCTT  799

seq1  TCCCTGCTAAGCCATCTCTCTGGCACAAAAATATGTTTTTAAATGAATTA  850
      |||||||||||||||||||||||||||||| |||||||||||||||| ||
seq2  TCCCTGCTAAGCCATCTCTCTGGCACAAAATTATGTTTTTAAATGAAATA  849

seq1  ATATATATATATATATATATGTGTGTG  877
      |||| ||||||||||||||||||||||
seq2  ATATTTATATATATATATATGTGTGTG  876