BAC Information

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BAC

Clone NameB6Ng01-092P05
Chromosome1 (Build37)
Map Location 128,453,395 - 128,454,275
singlet/doubletsinglet
Overlap geneE030049G20Rik
Upstream geneSlc35f5, Lypd1
Downstream geneLOC383559, Mgat5, LOC667090, Tmem163
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092P05.bB6Ng01-092P05.g
ACCDH904571DH904572
length1,184880
definitionDH904571|Mus musculus domesticus DNA, BAC clone: B6Ng01-092P05, 5' end.DH904572|Mus musculus domesticus DNA, BAC clone: B6Ng01-092P05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgccgctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggaggagctagagaaagtagccaaggagctaaagggatctgcaacccta
taggtggaacaacattatgactaaccagtaccccttggagctcatgtctc
tagctgcatataatatcaaaagatgggcctagtcgggcatcactgggaaa
gagaggtccatggactggcaacttaattggccccagtacaggatacaggc
aaaggggggattggggtggggccaggggagtggg
gaattccaccctctgttgactggcagggatgaggcagggacacgatacag
gaaacaggatgaatctcgttagtgagtgagctctttaaggaagcttcatc
agaatgtcttcttgcctgctgcatatattggtgcttgtattagttgtgtg
tctccccattggaacgtaacgtttgaaaaaaaagtgtcttaaactgtgca
gtcagtcggtccatcaggagtgggaggcagccggtcatgctgcatctgca
tccaggaagcagagagaaatggaggctggagctcagcgcacttttctcag
tcccggaggccagcatatgcgatgctgctgctggtgcttagaatgtgacc
attttcatgtgtgtatatgttgtcaccatactcacattacctcttgttac
cctctcttgtcccatccttccaattcccactgagaacttccactttctgc
tttcatgtcttgcgtgccattgacaccctcttctggcttcttcatgcccc
ctacacatgttgtaagagcactatgcacacatacacactacataagtgtg
aacacacatacacacacacacacacatacacactcacacacatacacaaa
catgcatgcatgtgcccctatacagctacatacacattgaaaaagtgaat
gggaagcaaatagctctggcccacagggctaagcaaaggaatgatgtgcg
ccaatatctccaagcctcattaggaagctaatctgttggctttcctttag
tctttagtgctctcaggggaggagtcctggaggagtcttggggagaggga
acccttggccttttggcataaatgttgggacactcagaagtggcagtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_128453395_128454275
seq2: B6Ng01-092P05.g_68_947 (reverse)

seq1  TACACACACACACACACACACACACACACACACACTGCCACTTCCTGAGT  50
      | ||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGCACACACACACACACACACACACACACACACACTGCCACTT-CTGAGT  49

seq1  GTCCCAACATTTATGCCAAAAGGCCAAGGGTTCCCTCTCCCCAAGACTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAACATTTATGCCAAAAGGCCAAGGGTTCCCTCTCCCCAAGACTCC  99

seq1  TCCAGGACTCCTCCCCTGAGAGCACTAAAGACTAAAGGAAAGCCAACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACTCCTCCCCTGAGAGCACTAAAGACTAAAGGAAAGCCAACAGA  149

seq1  TTAGCTTCCTAATGAGGCTTGGAGATATTGGCGCACATCATTCCTTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTCCTAATGAGGCTTGGAGATATTGGCGCACATCATTCCTTTGCT  199

seq1  TAGCCCTGTGGGCCAGAGCTATTTGCTTCCCATTCACTTTTTCAATGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTGTGGGCCAGAGCTATTTGCTTCCCATTCACTTTTTCAATGTGT  249

seq1  ATGTAGCTGTATAGGGGCACATGCATGCATGTTTGTGTATGTGTGTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGCTGTATAGGGGCACATGCATGCATGTTTGTGTATGTGTGTGAGT  299

seq1  GTGTATGTGTGTGTGTGTGTGTATGTGTGTTCACACTTATGTAGTGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGTGTGTGTGTGTGTGTATGTGTGTTCACACTTATGTAGTGTGTA  349

seq1  TGTGTGCATAGTGCTCTTACAACATGTGTAGGGGGCATGAAGAAGCCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCATAGTGCTCTTACAACATGTGTAGGGGGCATGAAGAAGCCAGA  399

seq1  AGAGGGTGTCAATGGCACGCAAGACATGAAAGCAGAAAGTGGAAGTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTGTCAATGGCACGCAAGACATGAAAGCAGAAAGTGGAAGTTCTC  449

seq1  AGTGGGAATTGGAAGGATGGGACAAGAGAGGGTAACAAGAGGTAATGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAATTGGAAGGATGGGACAAGAGAGGGTAACAAGAGGTAATGTGA  499

seq1  GTATGGTGACAACATATACACACATGAAAATGGTCACATTCTAAGCACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGTGACAACATATACACACATGAAAATGGTCACATTCTAAGCACCA  549

seq1  GCAGCAGCATCGCATATGCTGGCCTCCGGGACTGAGAAAAGTGCGCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGCATCGCATATGCTGGCCTCCGGGACTGAGAAAAGTGCGCTGAG  599

seq1  CTCCAGCCTCCATTTCTCTCTGCTTCCTGGATGCAGATGCAGCATGACCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCCTCCATTTCTCTCTGCTTCCTGGATGCAGATGCAGCATGACCG  649

seq1  GCTGCCTCCCACTCCTGATGGACCGACTGACTGCACAGTTTAAGACACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCTCCCACTCCTGATGGACCGACTGACTGCACAGTTTAAGACACTT  699

seq1  TTTTTTCAAACGTTACGTTCCAATGGGGAGACACACAACTAATACAAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAAACGTTACGTTCCAATGGGGAGACACACAACTAATACAAGCA  749

seq1  CCAATATATGCAGCAGGCAAGAAGACATTCTGATGAAGCTTCCTTAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATATGCAGCAGGCAAGAAGACATTCTGATGAAGCTTCCTTAAAGA  799

seq1  GCTCACTCACTAACGAGATTCATCCTGTTTCCTGTATCGTGTCCCTGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTCACTAACGAGATTCATCCTGTTTCCTGTATCGTGTCCCTGCCT  849

seq1  CATCCCTGCCAGTCAACAGAGGGTGGAATTC  881
      |||||||||||||||||||||||||||||||
seq2  CATCCCTGCCAGTCAACAGAGGGTGGAATTC  880