BAC Information

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BAC

Clone NameB6Ng01-093I02
Chromosome1 (Build37)
Map Location 23,053,750 - 23,054,683
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040338, Rims1, Rims1, EG665725, LOC665731
Downstream gene4933415F23Rik, Rn4.5s-ps4, EG623356, Ogfrl1, LOC665782, B3gat2, Smap1, 1110058L19Rik, 4921533L14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093I02.bB6Ng01-093I02.g
ACCDH904976DH904977
length9351,171
definitionDH904976|Mus musculus domesticus DNA, BAC clone: B6Ng01-093I02, 5' end.DH904977|Mus musculus domesticus DNA, BAC clone: B6Ng01-093I02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccagctacagctctgctttccacattttagttttcagaattat
gtttaaatttaattttgtttaaatcaacaaataatggtaatatgtgttct
agttgtatttctgtgactgtgctaaaataccctgccaaaaagtagcatag
gacaaaaaaggaggtttttattttttcatcttacaattcttttttaaaaa
tttttattagatattttctttatttatatttcaaatgttatccactttct
tcatttcctttccaaaaaatcccccttcgcatccctccttgccctgctca
ctaacccacccactcccacctcaccatcctagcattcccttacactgggg
catcaagcctcaacaggaccaagggcctctcctctcattgatgtcccaca
aggccatcctctgctacatatgtggctagagccatgggccccactgcgtg
tactctttggttggtgttttattccctgggagctctggcagtacaattag
ttacagctcagcattgtgggaaatgcaaaacaagaatgtcaaaaagctag
tcacctgccatgcattcaagggtggagagaagtgaatttgtgcttgcaat
ctgtttgcttgtacagtttctctgttcttatacaattcaggatccctatc
tagggaatggtgccacccatagtgggacaaatagtctcctgttaattaac
ctaattaaggcaatttcccaaagactaactcagtgtagataattcctccc
tgagattttctcttggctggtgattctaggttgtgtgaagttgacaatta
aagttacccatcacaatacagccaagaaagaacaagatggtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtatgtaaagtataagaatcataataaagac
taaataacttccctactaactccacatatgttctg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggcgaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctcttctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctatgcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagacccaagagctaaaggatctgcaaccctata
ggtggacacattatgactaccagtaccccggagctcttgactctagctgc
aatgtatcaaagatgctagtcggccatcactgaaagagaaggtccattga
acttgcaccttatatgtccagttacagggaaagtccagcccaaaaaggga
aatgggtgtgtatggggagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_23053750_23054683
seq2: B6Ng01-093I02.b_49_983 (reverse)

seq1  CAGAACATATGTGAAG-TAGTAGGTAAGTTAATTAGTCTTACTTAATGAT  49
      ||||||||||||| || ||||||| |||||| ||||||||  || |||||
seq2  CAGAACATATGTGGAGTTAGTAGGGAAGTTATTTAGTCTTTATT-ATGAT  49

seq1  TCTAATAC-TTACATACACACACACACACACACACACACACACACACCAT  98
      ||| |||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATACTTTACATACACACACACACACACACACACACACACACACCAT  99

seq1  CTTGTTCTTTCTTGGCTGTATTGTGATGGGTAACTTTAATTGTCAACTTC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCTTTCTTGGCTGTATTGTGATGGGTAACTTTAATTGTCAACTTC  149

seq1  ACACAACCTAGAATCACCAGCCAAGAGAAAATCTCAGGGAGGAATTATCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACCTAGAATCACCAGCCAAGAGAAAATCTCAGGGAGGAATTATCT  199

seq1  ACACTGAGTTAGTCTTTGGGAAATTGCCTTAATTAGGTTAATTAACAGGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAGTTAGTCTTTGGGAAATTGCCTTAATTAGGTTAATTAACAGGA  249

seq1  GACTATTTGTCCCACTATGGGTGGCACCATTCCCTAGATAGGGATCCTGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTTGTCCCACTATGGGTGGCACCATTCCCTAGATAGGGATCCTGA  299

seq1  ATTGTATAAGAACAGAGAAACTGTACAAGCAAACAGATTGCAAGCACAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATAAGAACAGAGAAACTGTACAAGCAAACAGATTGCAAGCACAAA  349

seq1  TTCACTTCTCTCCACCCTTGAATGCATGGCAGGTGACTAGCTTTTTGACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTCTCTCCACCCTTGAATGCATGGCAGGTGACTAGCTTTTTGACA  399

seq1  TTCTTGTTTTGCATTTCCCACAATGCTGAGCTGTAACTAATTGTACTGCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTTTGCATTTCCCACAATGCTGAGCTGTAACTAATTGTACTGCC  449

seq1  AGAGCTCCCAGGGAATAAAACACCAACCAAAGAGTACACGCAGTGGGGCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCCCAGGGAATAAAACACCAACCAAAGAGTACACGCAGTGGGGCC  499

seq1  CATGGCTCTAGCCACATATGTAGCAGAGGATGGCCTTGTGGGACATCAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTCTAGCCACATATGTAGCAGAGGATGGCCTTGTGGGACATCAAT  549

seq1  GAGAGGAGAGGCCCTTGGTCCTGTTGAGGCTTGATGCCCCAGTGTAAGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGAGGCCCTTGGTCCTGTTGAGGCTTGATGCCCCAGTGTAAGGG  599

seq1  AATGCTAGGATGGTGAGGTGGGAGTGGGTGGGTTAGTGAGCAGGGCAAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAGGATGGTGAGGTGGGAGTGGGTGGGTTAGTGAGCAGGGCAAGG  649

seq1  AGGGATGCGAAGGGGGATTTTTTGGAAAGGAAATGAAGAAAGTGGATAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGCGAAGGGGGATTTTTTGGAAAGGAAATGAAGAAAGTGGATAAC  699

seq1  ATTTGAAATATAAATAAAGAAAATATCTAATAAAAATTTTTAAAAAAGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAATATAAATAAAGAAAATATCTAATAAAAATTTTTAAAAAAGAA  749

seq1  TTGTAAGATGAAAAAATAAAAACCTCCTTTTTTGTCCTATGCTACTTTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGATGAAAAAATAAAAACCTCCTTTTTTGTCCTATGCTACTTTTT  799

seq1  GGCAGGGTATTTTAGCACAGTCACAGAAATACAACTAGAACACATATTAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGTATTTTAGCACAGTCACAGAAATACAACTAGAACACATATTAC  849

seq1  CATTATTTGTTGATTTAAACAAAATTAAATTTAAACATAATTCTGAAAAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTGTTGATTTAAACAAAATTAAATTTAAACATAATTCTGAAAAC  899

seq1  TAAAATGTGGAAAGCAGAGCTGTAGCTGGAGAATTC  934
      ||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTGGAAAGCAGAGCTGTAGCTGGAGAATTC  935