BAC Information

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BAC

Clone NameB6Ng01-094A02
Chromosome1 (Build37)
Map Location 18,004,797 - 18,005,840
singlet/doubletsinglet
Overlap geneLOC100040126
Upstream geneJph1, Gdap1, LOC383495, Rbm6-ps1, Ppia-ps1_125.1, Pi15, Crispld1, LOC665564
Downstream geneCrisp4, EG574082, EG654460, Defb17, LOC383499
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094A02.bB6Ng01-094A02.g
ACCDH905338DH905339
length1,041413
definitionDH905338|Mus musculus domesticus DNA, BAC clone: B6Ng01-094A02, 5' end.DH905339|Mus musculus domesticus DNA, BAC clone: B6Ng01-094A02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaatagttaatttttaccaaatctatctggaaacaagaatcagt
agagattccatactttgatgggggaagggcaaggatacagttttacccca
gcctcaccttatctcagcctcttaagagctaggataacggacatacactg
tgctcaggtagatcaatacattttggttagaattactacctttaattggc
gtggagaaaaagatcttgagactcattccattaaggaatctcttatacca
tgttggcttcctcactgctagataacagccatagatcagctgttacagat
cagcacggttacattttttgagaaacaacatagacaaatgaaaattgaga
attactttataaaacaaatggcttttgggatagaaatatagattagcagt
aaaaagcacttcttgctctttcagagaattcaagtttgcttaatctggct
gcttgcaactacctgtaactccagctcctaaagggcatgtgtatacacac
acacacacacacacacacacacacacacacacacacacacattcataatt
taaaatattttaaaaataatggatcatcctcttttgggttagtatacaaa
gaaatgaaattcattgtgacattttgatccatgtgtatcattattctttt
tttctcctggcttgactatgtaacactggcttgtctaatactttccctgt
agacttgaactggaagatacttacctgcctctgcctccagagtgatggga
ttaaaggaatgtgccctgatgcccatctactttattgttatttagacttg
tcactcattatcctcttcctggtaatcttacaggctaaaattagtttaac
attatcctctgttagatatcgcattccataaactgcctaactattaggaa
tagtgatggtaaatgcttttggtagacatattcaatatgtgtttcatgtt
ttgagtcaactggaatagttgtcattttattttttgtagaaacccattta
gatattgggcagcattatcttaagttcagtacagttaaaat

ccggaccaggaataggagtgggtgggttgggagcatagggagcagggagg
ggataggggatttttgaaggggaaagtaggaatggggataatatttgaaa
tgtaaataaagaaaatatctaaaaatatattaatccagaattgctcctgt
caaaatgaaatgcaggacaaagagtggagcagagattgaaggaaaggcca
tccagagacctagtgatccatcccatctgcagacaccaaactctgccatt
attgctgatgccaagaagtgcttgctgacaggaacctggtatagctgtcc
catgaaaggccaaagccttaccaatacagatgtggatgctagctgccagc
catctgactgaacatgtgtacctgagtagaggagttaggggaaagaatga
aggatctgaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_18004797_18005840
seq2: B6Ng01-094A02.b_28_1068 (reverse)

seq1  ATTTTAACTGTTACTGAACTTAGTATATGACTGCCCATTATCTAAATGGG  50
      |||||||||| |||||||||||  |||   ||||||| ||||||||||||
seq2  ATTTTAACTG-TACTGAACTTAAGATAATGCTGCCCAATATCTAAATGGG  49

seq1  TATCTAC-AAAAATAAAATGACAACTATT-CAGTGGACTCAAAAACATAG  98
      | ||||| ||||||||||||||||||||| |||| ||||| ||||||| |
seq2  TTTCTACAAAAAATAAAATGACAACTATTCCAGTTGACTC-AAAACAT-G  97

seq1  AAACACATATTGAAATATGTCTACCAAAAAGCATTTACCATCACTATTCC  148
      |||||||||||| |||||||||||| ||||||||||||||||||||||||
seq2  AAACACATATTG-AATATGTCTACC-AAAAGCATTTACCATCACTATTCC  145

seq1  TAATATGTTAGGCAGTTTATGGAATGCGATATCTAACAGAGGAT-ATGTT  197
      ||||| |||||||||||||||||||||||||||||||||||||| |||||
seq2  TAATA-GTTAGGCAGTTTATGGAATGCGATATCTAACAGAGGATAATGTT  194

seq1  AAACTAATTTTAGCCTGTAAGATTACCAGGAAGAGGATAATGAGTGACAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAATTTTAGCCTGTAAGATTACCAGGAAGAGGATAATGAGTGACAA  244

seq1  GTCTAAATAACAATAAAGTAGATGGGCATCATGGCACATTCCTTTAATCC  297
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTCTAAATAACAATAAAGTAGATGGGCATCAGGGCACATTCCTTTAATCC  294

seq1  CATCACTCTGGAGGCAGAGGCAGGTAAGTATCTTCCAGTTCAAGTCTACA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTCTGGAGGCAGAGGCAGGTAAGTATCTTCCAGTTCAAGTCTACA  344

seq1  GGGAAAGTATTAGACAAGCCAGTGTTACATAGTCAAGCCAGGAGAAAAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGTATTAGACAAGCCAGTGTTACATAGTCAAGCCAGGAGAAAAAA  394

seq1  AGAATAATGATACACATGGATCAAAATGTCACAATGAATTTCATTTCTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAATGATACACATGGATCAAAATGTCACAATGAATTTCATTTCTTT  444

seq1  GTATACTAACCCAAAAGAGGATGATCCATTATTTTTAAAATATTTTAAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTAACCCAAAAGAGGATGATCCATTATTTTTAAAATATTTTAAAT  494

seq1  TATGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  544

seq1  TGTATACACATGCCCTTTAGGAGCTGGAGTTACAGGTAGTTGCAAGCAGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACACATGCCCTTTAGGAGCTGGAGTTACAGGTAGTTGCAAGCAGC  594

seq1  CAGATTAAGCAAACTTGAATTCTCTGAAAGAGCAAGAAGTGCTTTTTACT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAAGCAAACTTGAATTCTCTGAAAGAGCAAGAAGTGCTTTTTACT  644

seq1  GCTAATCTATATTTCTATCCCAAAAGCCATTTGTTTTATAAAGTAATTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATCTATATTTCTATCCCAAAAGCCATTTGTTTTATAAAGTAATTCT  694

seq1  CAATTTTCATTTGTCTATGTTGTTTCTCAAAAAATGTAACCGTGCTGATC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTCATTTGTCTATGTTGTTTCTCAAAAAATGTAACCGTGCTGATC  744

seq1  TGTAACAGCTGATCTATGGCTGTTATCTAGCAGTGAGGAAGCCAACATGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACAGCTGATCTATGGCTGTTATCTAGCAGTGAGGAAGCCAACATGG  794

seq1  TATAAGAGATTCCTTAATGGAATGAGTCTCAAGATCTTTTTCTCCACGCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGAGATTCCTTAATGGAATGAGTCTCAAGATCTTTTTCTCCACGCC  844

seq1  AATTAAAGGTAGTAATTCTAACCAAAATGTATTGATCTACCTGAGCACAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGGTAGTAATTCTAACCAAAATGTATTGATCTACCTGAGCACAG  894

seq1  TGTATGTCCGTTATCCTAGCTCTTAAGAGGCTGAGATAAGGTGAGGCTGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTCCGTTATCCTAGCTCTTAAGAGGCTGAGATAAGGTGAGGCTGG  944

seq1  GGTAAAACTGTATCCTTGCCCTTCCCCCATCAAAGTATGGAATCTCTACT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAACTGTATCCTTGCCCTTCCCCCATCAAAGTATGGAATCTCTACT  994

seq1  GATTCTTGTTTCCAGATAGATTTGGTAAAAATTAACTATTAGAATTC  1044
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTGTTTCCAGATAGATTTGGTAAAAATTAACTATTAGAATTC  1041


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