BAC Information

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BAC

Clone NameB6Ng01-094C05
Chromosome1 (Build37)
Map Location 71,799,691 - 71,913,502
singlet/doubletdoublet
Overlap geneLOC675667
Upstream geneA830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528
Downstream geneEG667931, EG433319, LOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094C05.bB6Ng01-094C05.g
ACCDH905437DH905438
length1,135696
definitionDH905437|Mus musculus domesticus DNA, BAC clone: B6Ng01-094C05, 5' end.DH905438|Mus musculus domesticus DNA, BAC clone: B6Ng01-094C05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,799,691 - 71,800,624)(71,912,807 - 71,913,502)
sequence
gaattccttgctactgacatacatgtattggtctgccttacactgcatag
ttgagctgcatttgttgggactctatagagagaaacacatggaaaaactt
ctggtaatgtgcttgctgagtcctcacagtccttgggctgattgttgatt
ggcagaataatgtcagctgagacaaattcacgtgctgagacaagacacat
gctgaggtaagacctgtggaggacacatgatgttttggagcgagtttaga
aaggacttgacagacagtgacagaggctcagctaaccttgctgtgcaacg
gttgttggtctcatgtctttgctgatcttcatttctgagagaggcacagc
tgagaacttctggcgttccttctggtcccttctgctgactcctgctgagg
ctgaggcttggctgtctctgctaggcagtgtcactgctgctgatttgtgt
ttgttatcccgagtctacccaactggactgctgatatatccttgaaatgt
ttgtgagtggatcaagctgctgctgttgtcctgagatttgaactaccaat
ttccagacaacccagatgggagttgctccaaagaacctttctaaacaggt
tcacttccctcatatcctttcttttctactacctgtggtgagtagtgggc
taaaaggaaggttaaagcatttaagaactaccattaaaagtagactttga
aaaaattaaagttacacatgaccattatcttttgtgcccagtcacaccat
ctttgataccttcctgcctgtagtttcatccatttcaaattactctttct
acaatgagggaagcatgttggaattctactcacacatagattaggaagct
tatagtccttgggacaggtagcagcctgaactaaaagataatctataaga
gagctgcattatgactttcataggagttattagacatgactttctcctta
tcaacttgtgtgttgaagtcttcatgccagcacttaaagtatgataaaat
tgagataggattcttaagatataattatgctaaattaagattattttgac
aatgtgttggccagaagaaaagccgtgtaagggtattgagggcttctgtt
tacaatggaggcttcaggtgaaactaactccacgt
gaattcagcgtgcctctgacttgagtatctggggcattttgtcattggtt
ccatagaacactgatgtgtaggcttggggctgccgtagtcaacagttaca
cttcgagtttgattgatctcactttgtaataattctccctagagaagaaa
aatgggatgaacccctgaactacctccagctaggttcaaggaagtacaga
catttgatttttttttaacatttccatctgaattagagcccccatgggtg
atacaactgaaaaacagcatttcattccagggaaaataggcttggcagcc
cctccatatacaagttcaacttcaggccaaagaaaagaaacactcattat
gtaaccagatcaaattattagctatagaggagagttcctggtttggtcta
gtctgttataggaaataattaccagttgccaatgttatttggtcataaca
attttttattctagatattttcactttggagacctttaccatggtttctt
atttagttatatactattgcataagacacacagtcataaggcagggttga
ctcccttcttacttttcactagtattcacaaggaaaaggggaggtatttc
tctaagtaaataataataataacaataacaacaacaacaacaataatact
ccttttctaattcctggatgaagagggatggggtgggaggtgagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_71799691_71800624
seq2: B6Ng01-094C05.b_262_1178

seq1  GAGGACACATGATGTTTTGGAGCGAGTTTAGAAAGGACTTGACAGACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACACATGATGTTTTGGAGCGAGTTTAGAAAGGACTTGACAGACAGT  50

seq1  GACAGAGGCTCAGCTAACCTTGCTGTGCAACGGTTGTTGGTCTCATGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGCTCAGCTAACCTTGCTGTGCAACGGTTGTTGGTCTCATGTCT  100

seq1  TTGCTGATCTTCATTTCTGAGAGAGGCACAGCTGAGAACTTCTGGCGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGATCTTCATTTCTGAGAGAGGCACAGCTGAGAACTTCTGGCGTTC  150

seq1  CTTCTGGTCCCTTCTGCTGACTCCTGCTGAGGCTGAGGCTTGGCTGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGTCCCTTCTGCTGACTCCTGCTGAGGCTGAGGCTTGGCTGTCTC  200

seq1  TGCTAGGCAGTGTCACTGCTGCTGATTTGTGTTTGTTATCCCGAGTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGGCAGTGTCACTGCTGCTGATTTGTGTTTGTTATCCCGAGTCTAC  250

seq1  CCAACTGGACTGCTGATATATCCTTGAAATGTTTGTGAGTGGATCAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGGACTGCTGATATATCCTTGAAATGTTTGTGAGTGGATCAAGCT  300

seq1  GCTGCTGTTGTCCTGAGATTTGAACTACCAATTTCCAGACAACCCAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGTTGTCCTGAGATTTGAACTACCAATTTCCAGACAACCCAGATG  350

seq1  GGAGTTGCTCCAAAGAACCTTTCTAAACAGGTTCACTTCCCTCATATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGCTCCAAAGAACCTTTCTAAACAGGTTCACTTCCCTCATATCCT  400

seq1  TTCTTTTCTACTACCTGTGGTGAGTAGTGGGCTAAAAGGAAGGTTAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTACTACCTGTGGTGAGTAGTGGGCTAAAAGGAAGGTTAAAGC  450

seq1  ATTTAAGAACTACCATTAAAAGTAGACTTTGAAAAAATTAAAGTTACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGAACTACCATTAAAAGTAGACTTTGAAAAAATTAAAGTTACACA  500

seq1  TGACCATTATCTTTTGTGCCCAGTCACACCATCTTTGATACCTTCCTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATTATCTTTTGTGCCCAGTCACACCATCTTTGATACCTTCCTGCC  550

seq1  TGTAGTTTCATCCATTTCAAATTACTCTTTCTACAATGAGGGAAGCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTTCATCCATTTCAAATTACTCTTTCTACAATGAGGGAAGCATGT  600

seq1  TGGAATTCTACTCACACATAGATTAGGAAGCTTATAGTCCTTGGGACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTCTACTCACACATAGATTAGGAAGCTTATAGTCCTTGGGACAGG  650

seq1  TAGCAGCCTGAACTAAAAGATAATCTATAAGAGAGCTGCATTATGACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCCTGAACTAAAAGATAATCTATAAGAGAGCTGCATTATGACTTT  700

seq1  CATAGGAGGTTATTAGGACATGACTTTCTCCTTATCAACTTTGTGTGTTG  750
      ||||||| ||||||| ||||||||||||||||||||||| ||||||||||
seq2  CATAGGA-GTTATTA-GACATGACTTTCTCCTTATCAAC-TTGTGTGTTG  747

seq1  AAGTCTCAATGCCCAGCACTTAAAAGTATGATAAAATTGAGATAGGATCT  800
      ||||||  ||| ||||||||| |||||||||||||||||||||||||| |
seq2  AAGTCTTCATG-CCAGCACTT-AAAGTATGATAAAATTGAGATAGGAT-T  794

seq1  TTAAAGATATAATTATGGTTAAATTAAGATTTATTTGACAAATGTGTGGG  850
       | ||||||||||||| | ||||||||||||  |||||| ||||||| ||
seq2  CTTAAGATATAATTAT-GCTAAATTAAGATTATTTTGAC-AATGTGTTGG  842

seq1  CAGAGAGGAGAGGCCGTGTAAGGGTATTGAGGGGCTTCCTGTTTAACAAT  900
      |  ||| || | |||||||||||||||||| |||||| |||||| |||||
seq2  C-CAGAAGAAAAGCCGTGTAAGGGTATTGA-GGGCTT-CTGTTT-ACAAT  888

seq1  GTGAGGGGCTTCAGGTGAAACTAAGCTCCCACGT  934
      |   | |||||||||||||||||| || ||||||
seq2  G---GAGGCTTCAGGTGAAACTAA-CT-CCACGT  917

seq1: chr1_71912807_71913502
seq2: B6Ng01-094C05.g_69_764 (reverse)

seq1  TCCTCACCTCCCACCCCATCCCTCTTCATCCAGGAATTAGAAAAGGAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACCTCCCACCCCATCCCTCTTCATCCAGGAATTAGAAAAGGAGTA  50

seq1  TTATTGTTGTTGTTGTTGTTATTGTTATTATTATTATTTACTTAGAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTTGTTGTTGTTGTTATTGTTATTATTATTATTTACTTAGAGAAA  100

seq1  TACCTCCCCTTTTCCTTGTGAATACTAGTGAAAAGTAAGAAGGGAGTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCCCTTTTCCTTGTGAATACTAGTGAAAAGTAAGAAGGGAGTCAA  150

seq1  CCCTGCCTTATGACTGTGTGTCTTATGCAATAGTATATAACTAAATAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCTTATGACTGTGTGTCTTATGCAATAGTATATAACTAAATAAGA  200

seq1  AACCATGGTAAAGGTCTCCAAAGTGAAAATATCTAGAATAAAAAATTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGGTAAAGGTCTCCAAAGTGAAAATATCTAGAATAAAAAATTGTT  250

seq1  ATGACCAAATAACATTGGCAACTGGTAATTATTTCCTATAACAGACTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAAATAACATTGGCAACTGGTAATTATTTCCTATAACAGACTAGA  300

seq1  CCAAACCAGGAACTCTCCTCTATAGCTAATAATTTGATCTGGTTACATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCAGGAACTCTCCTCTATAGCTAATAATTTGATCTGGTTACATAA  350

seq1  TGAGTGTTTCTTTTCTTTGGCCTGAAGTTGAACTTGTATATGGAGGGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTTTCTTTTCTTTGGCCTGAAGTTGAACTTGTATATGGAGGGGCT  400

seq1  GCCAAGCCTATTTTCCCTGGAATGAAATGCTGTTTTTCAGTTGTATCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCCTATTTTCCCTGGAATGAAATGCTGTTTTTCAGTTGTATCACC  450

seq1  CATGGGGGCTCTAATTCAGATGGAAATGTTAAAAAAAAATCAAATGTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGGGCTCTAATTCAGATGGAAATGTTAAAAAAAAATCAAATGTCTG  500

seq1  TACTTCCTTGAACCTAGCTGGAGGTAGTTCAGGGGTTCATCCCATTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCTTGAACCTAGCTGGAGGTAGTTCAGGGGTTCATCCCATTTTTC  550

seq1  TTCTCTAGGGAGAATTATTACAAAGTGAGATCAATCAAACTCGAAGTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAGGGAGAATTATTACAAAGTGAGATCAATCAAACTCGAAGTGTA  600

seq1  ACTGTTGACTACGGCAGCCCCAAGCCTACACATCAGTGTTCTATGGAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGACTACGGCAGCCCCAAGCCTACACATCAGTGTTCTATGGAACC  650

seq1  AATGACAAAATGCCCCAGATACTCAAGTCAGAGGCACGCTGAATTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAAAATGCCCCAGATACTCAAGTCAGAGGCACGCTGAATTC  696