MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-094C08
Chromosome	1 (Build37)
Map Location	18,837,856 - 18,839,014
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC665564, LOC100040126, Crisp4, EG574082, EG654460, Defb17, LOC383499
Downstream gene	EG435611, LOC100040189, Tcfap2d, LOC100040413, Tcfap2b, LOC100040198, LOC226901
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC665564 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665564
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100040126 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Crisp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78081 MGI:1925331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG574082 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:654454 MGI:3646526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	EG654460 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:654460 MGI:3648148
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Defb17 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383499 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins pseudo : _no_value

name	EG435611 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435611 MGI:3649018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC100040189 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040189
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Tcfap2d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226896 MGI:2153466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040413 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040413
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 633 ESTs, 12 Proteins pseudo : _no_value

name	Tcfap2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21419 MGI:104672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040198 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040198
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC226901 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:226901
definition	note : isoleucine-tRNA synthetase pseudogene pseudo : _no_value

name	Crisp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88595370 GeneID:78081 MGI:1925331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich secretory protein 4 transcript_id : NM_030033.1

name	EG654460 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84993771 GeneID:654460 MGI:3648148
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG654460 transcript_id : NM_001039123.1

name	Defb17 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:91064862 GeneID:654464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : defensin beta 17 transcript_id : NM_001040027.1

name	EG435611 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233623 GeneID:435611 MGI:3649018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG435611 transcript_id : XM_487581.5

name	Tcfap2d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23346596 GeneID:226896 MGI:2153466
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor AP-2, delta transcript_id : NM_153154.1

name	Tcfap2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70609880 GeneID:21419 MGI:104672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor AP-2 beta transcript_id : NM_009334.2

name	Tcfap2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70609884 GeneID:21419 MGI:104672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor AP-2 beta transcript_id : NM_001025305.1

name	LOC100040198 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233625 GeneID:100040198
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Ac2-210 transcript_id : XM_001474254.1

name	Crisp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88595371 CCDS:CCDS14835.1 GeneID:78081 MGI:1925331
definition	codon_start : 1 product : cysteine-rich secretory protein 4 protein_id : NP_084309.1

name	EG654460 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84993772 GeneID:654460 MGI:3648148
definition	codon_start : 1 product : defensin beta 18 protein_id : NP_001034212.1

name	Defb17 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:91064863 GeneID:654464
definition	codon_start : 1 product : defensin beta 17 protein_id : NP_001035116.1

name	EG435611 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233624 GeneID:435611 MGI:3649018
definition	codon_start : 1 product : similar to thioredoxin-like 4A protein_id : XP_487581.5

name	Tcfap2d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346597 CCDS:CCDS14838.1 GeneID:226896 MGI:2153466
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IPI] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 product : transcription factor AP-2, delta protein_id : NP_694794.1

name	Tcfap2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70609881 CCDS:CCDS14839.1 GeneID:21419 MGI:104672
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : transcription factor AP-2 beta isoform 1 protein_id : NP_033360.2

name	Tcfap2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70609885 CCDS:CCDS14840.1 GeneID:21419 MGI:104672
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : transcription factor AP-2 beta isoform 2 protein_id : NP_001020476.1

name	LOC100040198 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233626 GeneID:100040198
definition	codon_start : 1 product : similar to Ac2-210 protein_id : XP_001474304.1

name	LOC665564 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665564
definition	number : 1 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 5 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 4 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 3 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 2 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 1 pseudo : _no_value

name	LOC383499 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383499
definition	number : 1 pseudo : _no_value

name	LOC100040189 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040189
definition	number : 1 pseudo : _no_value

name	LOC100040189 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040189
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:163202
definition	standard_name : RH126494

name	(CDS detail)
type	STS
link
xref	UniSTS:125442
definition	standard_name : MHAa88h1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128575
definition	standard_name : D1Mit230

name	(CDS detail)
type	STS
link
xref	UniSTS:123296
definition	standard_name : 16.MMHAP17FF1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128651
definition	standard_name : D1Mit298

name	(CDS detail)
type	STS
link
xref	UniSTS:164108
definition	standard_name : AI606113

name	(CDS detail)
type	STS
link
xref	UniSTS:234076
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128653
definition	standard_name : D1Mit3

name	EG574082 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:124517712 GeneID:654454 MGI:3646526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG574082 pseudo : _no_value transcript_id : NR_002879.2

name	LOC100040413 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233631 GeneID:100040413
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 633 ESTs, 12 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_031764.1

clone name	MSMg01-334G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316I04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-374F01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-156A12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-098K24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-538M05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-547B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116D14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-543M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046H17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-290A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363D03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-446F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045E17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-094C08.b	B6Ng01-094C08.g
ACC	DH905441	DH905442
length	1,162	1,114
definition	DH905441\|Mus musculus domesticus DNA, BAC clone: B6Ng01-094C08, 5' end.	DH905442\|Mus musculus domesticus DNA, BAC clone: B6Ng01-094C08, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg ttcagcattcttaatcatcagggaaatgcaaattaaaacaaccctaagat tccacctcacgccagccagaatggctacgatcaaaaattcaggtgacagc agatgctggcaaggatgtggagaaagaggaacactcccccattgttggtg gaatttcacacttgtacaaccactctggaaatcagtctggtggttcctca gaaaattggacatagtagtactggaggatcccccaatacctctcttgggc atatatccagaaaatgttccaaccagtaagaagggcacctgttcaactat gttcatagcagccttatttgttatagccagaagctggaaataaccctgat gcctctcaacaaagcaatagatacagaaaatgtggtacatttacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa atggatgtaccttgagggcatcatcctgagtgagctaacccaatcacaaa agaaatcaaacgatatgtactcactgataagtggatattagctcagaaac ttagaatacccaagatacaagattcaacttgcaaaacacatgaaacttaa gaagaacgaagaccaaagtgtggacagtttgcctcttcttagaattggga acaaaacacccacggaaggagttgcagaggcaaatttggagctcagacta aaggatggaccatctagagactgccatacccgggaatccatcccatagtc agcctccaaaagctgacaccatagcacacactagcaagattttgctgaaa ggaccgtgatatagatgtctcttgtgaggctatgctggtgcctagcaaac acagaagtggatgctcacagtcagctattggtggatcacagggcccccaa tggaggagctagagaaagtacccaaggtgctaaaggggtctgcaccctgt agtagacacatatgattaaccagtacccctggaactcattcactagctgc atatgtatcagagatggcctagtcagccaaattggaagagagccattgat cttgcaactttatattgccctcatacaggaccgcaggccagatgaatttt gccataagtatg	gaattctttggtgatgtgggccacttgctaacggaattctgtgttcagat ggaatggaaaacattgctttgttttctgtgttgtaccagagggccactgt gcacaaaccaagtatctctctgtgtctagctctgtgctaatgttgaattc tacatttttgtccatgacagagatgaaagaagtgagaaatagtagaaagc ctaccaattttcaactgtactatgcaattctgaaaattttgggttaggaa ggatataaaaggacacatcttctccaacgtacactacgtattttaagttg gtgggtattggaactctcatcatagatagagcaccaaacactttttttgc aaaatttaaaaattaacatagaatgttaagctaatttttaattttcaaga ttgtagtgtttgaatcattataacgactgactaatgagtagatgtattct tcagtcctagtatttctgattgcatgaagactggcatctcaccaagttca ttcattcccataatccaagtgtcagaaagaaacttgatgcagagttgttg tttaataaaactttgttaaagtttattcaaataaccgaatacattttatg attgaacaggaaatcagagaaagtatttgtcaaaatgttattgatgtcca tgcatgcagatataaaattttcactctttcctaaagtgcttgactaaaac tcttccaaagattttcaattaagaataagaaatgaggacatgactcagtg gttattggcacttggtgctcttacagaggacctgagttaagttttcaaca cccacatgatggatcaaagccatccattatttcagtgcagtgggtctgac accatcttctcaattctacaggcatcagtattcacatggtacacataaag acatagtataaaaatcatcatcatcatcatcatcatactacattttgaaa aagcatagtacatgacacgatatcatcatggatcagaaactgagtatgct ccactgtgaatgtccatgactcatcatttctgaaatgatactaaaatctg tccctttatcacctccatgctttctgaggagttacacgaagtcatcagat ttaatggcattctt
quality values	Open. Hide. 61 47 31 40 61 61 61 38 24 61 61 61 61 61 55 55 55 43 55 61 61 61 61 61 61 28 43 30 19 27 22 26 12 27 59 59 59 59 61 61 61 61 59 61 61 61 61 61 59 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 49 44 34 34 44 44 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 37 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 53 61 61 57 57 57 57 47 57 57 57 57 57 57 57 53 57 57 57 53 47 57 47 47 57 57 57 53 57 52 57 57 57 53 57 57 57 53 53 53 57 57 57 53 57 52 57 47 57 53 53 57 57 57 45 57 57 57 57 53 57 57 53 57 57 47 53 45 52 52 57 52 41 52 57 53 53 50 57 57 53 53 53 53 53 50 57 53 52 50 47 47 47 30 57 53 52 34 52 53 41 53 45 41 28 57 50 45 57 52 57 57 53 47 43 57 57 57 47 50 52 50 53 57 46 41 46 42 52 47 41 57 31 57 57 40 57 46 30 39 46 38 32 40 17 37 26 38 41 37 50 53 28 46 46 50 37 30 52 29 53 53 37 29 46 52 50 50 50 40 52 47 37 37 53 37 24 53 53 57 34 37 39 32 27 53 53 37 33 31 28 27 33 32 45 20 57 37 52 24 53 38 24 33 52 33 31 33 31 57 33 40 24 36 57 37 37 57 41 40 33 47 31 37 41 35 33 28 41 20 37 25 57 53 33 48 37 29 40 41 37 24 35 27 33 39 34 30 38 48 36 30 29 32 40 21 23 13 31 30 29 39 30 22 48 46 31 31 27 25 31 25 41 31 46 29 27 36 30 29 28 35 31 28 21 44 29 28 29 30 46 51 30 24 28 29 28 29 21 24 29 36 18 29 29 24 29 29 29 29 27 25 29 29 29 18 29 21 33 29 41 26 51 46 19 22 28 29 26 29 51 24 17 16 28 21 31 24 24 31 29 25 27 30 27 20 31 20 29 28 34 28 34 28 25 26 18 28 35 29 26 13 29 25 28 27 29 29 23 30 22 26 20 27 34 30 19 29 26 46 28 22 21 29 29 33 38 33 22 29 34 24 21 15 28 24 30 33 20 29 24 16 28 34 31 34 29 28 21 17 29 8 6 12 26 20 20 26 19 20 25 21 27 41 17 32 36 38 36 36 13 25 28 28 27 43 31 15 30 15 31 31 23 18 17 8 12 51 33 13 25 23 19 31 25 12 14 24 14 8 24 22 34 20 51 13 25 44 38 29 27 30 31 31 13 25 8 32 22 19 23 19 14 23 15 26 8 35 15 30 10 29 14 23 29 20 35 9 16 20 13 16 16 23 23 26 23 25 29 23 29 22 22 28 21 24 17 25 25 26 27 33 14 15 17 31 29 23 29 30 26 16 4 3 7 13 10 8 18 26 13 15 11 31 11 23 10 18 20 9 22 20 22 9 6 13 15 10 6 6 5 5 7 5 12 10 7 4 3 6 8 4 9 4 15 13 11 23 11 18 14 11 8 10 19 15 6 16 14 16 23 32 11 6 6 6 5 6 5 10 16 5 5 8 26 9 4 4 2 4 4 5 8 7 3 14 6 7 15 3 4 4 5 4 2 4 2 4 4 3 1 1 3 1 1 1 3 4 3 9 3 2 3 2	Open. Hide. 55 55 47 49 61 14 15 12 13 19 7 14 14 14 28 40 49 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 52 59 59 49 35 28 28 36 59 59 59 61 61 61 61 61 61 61 61 61 59 59 59 61 59 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 59 52 61 59 61 61 59 61 52 59 59 61 59 61 59 59 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 44 55 59 61 61 61 59 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 59 59 55 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 59 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 55 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 38 49 41 14 31 31 24 31 37 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 53 53 53 61 53 61 61 61 43 61 61 61 61 61 47 61 52 61 61 61 61 52 61 61 61 57 57 57 57 53 57 57 47 47 57 57 53 53 57 53 57 53 52 57 57 53 52 57 53 57 57 57 45 57 47 38 57 47 47 57 53 53 57 57 57 53 53 57 57 57 57 53 53 57 57 52 53 57 57 47 37 57 47 28 57 53 52 38 47 52 57 50 57 47 50 52 53 34 57 57 57 50 50 47 53 47 32 53 53 57 53 53 42 31 57 47 43 43 38 53 47 42 57 28 53 57 53 45 50 45 52 57 57 41 42 48 35 57 57 52 47 52 30 39 39 39 57 52 42 42 43 32 43 53 29 53 53 50 30 53 53 53 40 35 53 36 42 50 53 33 31 25 22 57 57 40 45 36 48 53 53 39 57 39 37 48 37 33 57 46 37 35 40 25 31 40 53 32 31 32 17 57 57 57 37 41 53 35 44 48 41 28 57 53 33 40 24 57 57 43 33 24 32 40 26 20 53 23 53 33 37 40 53 19 46 51 29 29 32 32 21 32 34 27 27 31 44 39 36 41 39 32 30 24 44 32 32 34 37 29 32 44 44 32 24 38 29 34 34 46 25 44 31 37 29 24 33 27 29 25 22 38 16 29 30 13 34 29 30 25 15 29 30 22 38 25 28 51 51 39 34 18 29 30 29 33 51 38 24 36 18 29 32 35 31 33 29 24 23 28 24 46 30 29 31 38 24 32 26 27 21 29 36 35 28 41 24 8 6 9 6 28 28 28 29 17 41 51 29 21 31 28 29 30 13 12 15 41 25 34 41 30 23 38 34 29 12 23 27 26 33 25 24 29 12 24 28 27 23 28 29 7 8 8 21 13 38 30 20 29 18 25 27 38 18 20 28 23 36 20 31 20 51 25 19 28 27 15 31 17 19 30 33 27 38 51 51 51 38 22 25 21 19 26 38 20 33 32 26 26 32 23 29 38 19 23 32 17 29 35 13 14 20 14 6 4 11 35 44 44 26 15 20 44 39 42 6 4 4 13 25 16 23 25 34 22 13 21 16 35 16 10 13 15 21 14 13 17 17 30 22 29 15 27 29 8 6 5 29 14 29 21 42 29 24 22 19 29 8 10 6 30 12 12 12 12 29 8 15 11 18 8 13 31 30 7 13 11 9 21 5 6 21 4 8 9 25 11 16 22 6 21 30 22 5 9 15 19 31 9 5 5 3 7 16 26 9 19 26 18 20 3 6 4 6 4 4 5 4 15 35 25 10 17 11 16 7 23 6 11 6 3 3 8 16 17 25 8 5 4 6 20 19 5 6 3 4 6 20 8 18 10 9 13 12 10 8 7 18 8 10 6 6 7 2 3 3 13 4 7 6 2 2 1 5 7 6 18 17

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_18837856_18839014
seq2: B6Ng01-094C08.g_68_1181 (reverse)

seq1  AAGAATGCTCATTTACATTCTTGATTGACTTTCTGTTGTTACTCCTCAGA  50
      |||||||| || ||| ||   ||| |||||   |  ||| ||||||||| 
seq2  AAGAATGC-CA-TTAAAT--CTGA-TGACT---TCGTGTAACTCCTCAG-  41

seq1  AAAGCAGTGGAGGTTGATAAAAGTGACAGATTTTTAGTATACATTTCAGA  100
      |||||| |||||| |||| |||| |||||| ||||||||| |||||||| 
seq2  AAAGCA-TGGAGG-TGAT-AAAGGGACAGA-TTTTAGTAT-CATTTCAG-  85

seq1  AAAATGATGGAGTCCATGGGAACATTTCACAGTGGAGCAATACTTCAGTT  150
       ||||||| |||| |||||  ||| ||||||||||||| |||| ||||||
seq2  -AAATGAT-GAGT-CATGG--ACA-TTCACAGTGGAGC-ATAC-TCAGTT  127

seq1  TTCCTGGATCCCAATGATTGATATCGTGTTCATGTTACTATGCCTTTTTC  200
      |  || |||||  |||| |||||||||| ||||| ||||||| |||||||
seq2  T--CT-GATCC--ATGA-TGATATCGTG-TCATG-TACTATG-CTTTTTC  168

seq1  AAAAATGTTAAGTATTGATTGATTGATTGATTGATTGATTGATTTTTTAT  250
       |||||||  |||| ||| ||| ||| ||| ||| ||| ||| |||||||
seq2  -AAAATGT--AGTA-TGA-TGA-TGA-TGA-TGA-TGA-TGA-TTTTTAT  207

seq1  ACTATGTCTTTATGTGTACCATGTGAATACCTGATGCCTGTAGAATTGAG  300
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACTATGTCTTTATGTGTACCATGTGAATA-CTGATGCCTGTAGAATTGAG  256

seq1  AAGATGGTGTCAGACCCACTGCACCTGAAATAATGGATGGCTTTGATCCA  350
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGATGGTGTCAGACCCACTGCA-CTGAAATAATGGATGGCTTTGATCCA  305

seq1  TCATGTGGGTGTTGAAAACTTAACTCAGGTCCTCTGTAAGAGCACCAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGGGTGTTGAAAACTTAACTCAGGTCCTCTGTAAGAGCACCAAGT  355

seq1  GCCAATAACCACTGAGTCATGTCCTCATTTCTTATTCTTAATTGAAAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATAACCACTGAGTCATGTCCTCATTTCTTATTCTTAATTGAAAATC  405

seq1  TTTGGAAGAGTTTTAGTCAAGCACTTTAGGAAAGAGTGAAAATTTTATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGAGTTTTAGTCAAGCACTTTAGGAAAGAGTGAAAATTTTATAT  455

seq1  CTGCATGCATGGACATCAATAACATTTTGACAAATACTTTCTCTGATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGCATGGACATCAATAACATTTTGACAAATACTTTCTCTGATTTC  505

seq1  CTGTTCAATCATAAAATGTATTCGGTTATTTGAATAAACTTTAACAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAATCATAAAATGTATTCGGTTATTTGAATAAACTTTAACAAAGT  555

seq1  TTTATTAAACAACAACTCTGCATCAAGTTTCTTTCTGACACTTGGATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAAACAACAACTCTGCATCAAGTTTCTTTCTGACACTTGGATTAT  605

seq1  GGGAATGAATGAACTTGGTGAGATGCCAGTCTTCATGCAATCAGAAATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGAATGAACTTGGTGAGATGCCAGTCTTCATGCAATCAGAAATAC  655

seq1  TAGGACTGAAGAATACATCTACTCATTAGTCAGTCGTTATAATGATTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACTGAAGAATACATCTACTCATTAGTCAGTCGTTATAATGATTCAA  705

seq1  ACACTACAATCTTGAAAATTAAAAATTAGCTTAACATTCTATGTTAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTACAATCTTGAAAATTAAAAATTAGCTTAACATTCTATGTTAATTT  755

seq1  TTAAATTTTGCAAAAAAAGTGTTTGGTGCTCTATCTATGATGAGAGTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTGCAAAAAAAGTGTTTGGTGCTCTATCTATGATGAGAGTTCC  805

seq1  AATACCCACCAACTTAAAATACGTAGTGTACGTTGGAGAAGATGTGTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCCACCAACTTAAAATACGTAGTGTACGTTGGAGAAGATGTGTCCT  855

seq1  TTTATATCCTTCCTAACCCAAAATTTTCAGAATTGCATAGTACAGTTGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATCCTTCCTAACCCAAAATTTTCAGAATTGCATAGTACAGTTGAA  905

seq1  AATTGGTAGGCTTTCTACTATTTCTCACTTCTTTCATCTCTGTCATGGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTAGGCTTTCTACTATTTCTCACTTCTTTCATCTCTGTCATGGAC  955

seq1  AAAAATGTAGAATTCAACATTAGCACAGAGCTAGACACAGAGAGATACTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTAGAATTCAACATTAGCACAGAGCTAGACACAGAGAGATACTT  1005

seq1  GGTTTGTGCACAGTGGCCCTCTGGTACAACACAGAAAACAAAGCAATGTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTGCACAGTGGCCCTCTGGTACAACACAGAAAACAAAGCAATGTT  1055

seq1  TTCCATTCCATCTGAACACAGAATTCCGTTAGCAAGTGGCCCACATCACC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCCATCTGAACACAGAATTCCGTTAGCAAGTGGCCCACATCACC  1105

seq1  AAAGAATTC  1159
      |||||||||
seq2  AAAGAATTC  1114

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information