BAC Information

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BAC

Clone NameB6Ng01-094D11
Chromosome1 (Build37)
Map Location 61,720,478 - 61,721,127
singlet/doubletsinglet
Overlap genePard3b
Upstream geneEif4a-ps4, Cd28, LOC667555, Rpl18-rs8, Ctla4, LOC100043049, Icos, LOC433313, LOC100042566
Downstream geneLOC667592
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094D11.bB6Ng01-094D11.g
ACCDH905495DH905496
length1,1421,051
definitionDH905495|Mus musculus domesticus DNA, BAC clone: B6Ng01-094D11, 5' end.DH905496|Mus musculus domesticus DNA, BAC clone: B6Ng01-094D11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaattaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatctactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacaaagacaacatttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacacagatgtagctgtctcttgtgagactatgcccgggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tgagagctagagaagtagccagagctaaagggatctcaccctatagtgac
acatatgactacagtaccccgagctctgactctagctgaaatgtatcaag
atgctagtcgcatcactgaaagagagtcaatgaacgcaactttaatgctc
agtacagggacgcaagctaaggggagtgggtgtgttaggagt
gaattcttaaaccaaattaaaatcctcatatcttgcctttattcctccaa
ataccaatgaaagaaaaaagaaaagagaaacaaagaagaaaggaaaagaa
aaagctaaaagaaaaatttctctctttttattcatcccaagcaaaatttg
aaatgtgtatcaggtagggagaaagtgggcagcctgtctagtccctgatt
ttagtgggattgcttccagcttctctccatgttgggtactggtttgctat
agattgcttttattatgtttaggtatgggccttgaattcctgatctatcc
aagacttttatcatgaatgggtgttggattttgtcaaatgctttctccga
aactaacgagatgatcatgtggtttttgagtttgtttatatagtgtataa
ccttgatggatttctgtatattaaaccatccctgcatccctgggatgaaa
cttacttggtgatgatggatgatcgttttgatgtgttcttggattcagtt
tgcaaggattttattgagtatttttgtattgatattcataagggaaattg
gtctgaagttctctttctttgttagatctttgtgtggtttaggtatcaga
gtaattgtggcttcatagaatgagttgggtagagttccttctgtttctat
tttgtggaatagtttgaggagaattggaattaggtcttctttgaaggtct
gatagaactttgcactaaacccatctggtcctgggctttatttggttggg
agactattatgactgcttctatttctttaggggaatgggactgtttagat
cgttaatctgatcctgatttaactttggtacctggcatctgtttaggaag
ttgtccatttcatctaggttttccagttttgttgagtttaaccttttgta
gaaagatctgatggtgtttggatttcctcaggatctgttgtatgtctctc
tttcatttcttatttagttaattaggatactagttcctgtgccctttagt
agtctggctaaggttatctatctgtgtgatttcctcaagaaccagcatct
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_61720478_61721127
seq2: B6Ng01-094D11.g_470_1111 (reverse)

seq1  TGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCAC  50
      |||||| ||||| ||||||   ||||||||||  ||||||| ||||| ||
seq2  TGGTTC-TTGAGGAAATCACACAGATAGATAA--CCTTAGCCAGACT-AC  46

seq1  TAAAGGGCACAGGGAC-AAAATCCTAATTAACAAAATCAGAAATGAAAAG  99
      ||||||||||||| || |  |||||||||||| |||| ||||||| ||||
seq2  TAAAGGGCACAGGAACTAGTATCCTAATTAACTAAATAAGAAATG-AAAG  95

seq1  GGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTT  149
       ||||||| |||||||||||||| ||||||| ||||||||||||||| ||
seq2  AGAGACAT-ACAACAGATCCTGAGGAAATCC-AAACACCATCAGATCTTT  143

seq1  CTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACA  199
      |||||||||| || |||||||||||||||||||||| || ||||||||||
seq2  CTACAAAAGGTTAAACTCAACAAAACTGGAAAACCTAGATGAAATGGACA  193

seq1  AATTTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGAC  249
      | || ||  |||||| ||||||||||||||| |||||||||||  || ||
seq2  ACTTCCTAAACAGATGCCAGGTACCAAAGTTAAATCAGGATCAGATTAAC  243

seq1  CATCTAAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAG  299
       |||||||||||||||| || |||||||||||||||||||| | ||||||
seq2  GATCTAAACAGTCCCAT-TCCCCTAAAGAAATAGAAGCAGTCA-TAATAG  291

seq1  TCTCCCAACCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCT  349
      ||||||||||||| ||||||||||||||||||||||||||||| ||||||
seq2  TCTCCCAACCAAATAAAGCCCAGGACCAGATGGGTTTAGTGCAAAGTTCT  341

seq1  ATCAGACCTTCAAAGAAGATCTAATTCCAATTCTGCACAAACTATTTCAC  399
      ||||||||||||||||||| |||||||||||||| | ||||||||| |||
seq2  ATCAGACCTTCAAAGAAGACCTAATTCCAATTCTCCTCAAACTATTCCAC  391

seq1  AAAATAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTAT  449
      |||||||||  |||||| ||||||||||||||||| ||||||||||| ||
seq2  AAAATAGAAACAGAAGGAACTCTACCCAACTCATTCTATGAAGCCACAAT  441

seq1  TACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCA  499
      ||||||||||||||||||||| ||||||| |||||||| |||||||||||
seq2  TACTCTGATACCTAAACCACACAAAGATCTAACAAAGAAAGAGAACTTCA  491

seq1  GACCAATTTCTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTC  549
      |||||||||| |||||||||||| || ||||||| ||||||||||| || 
seq2  GACCAATTTCCCTTATGAATATCAATACAAAAATACTCAATAAAATCCTT  541

seq1  GCTAACCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGT  599
      || ||| |||||||||||||||| ||| | |||||||||| | |||||||
seq2  GCAAACTGAATCCAAGAACACATCAAAACGATCATCCATCATCACCAAGT  591

seq1  AGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCA  649
      | |||| || ||||||||||||||||||||||||||||  ||||||||||
seq2  AAGTTTCATCCCAGGGATGCAGGGATGGTTTAATATACAGAAATCCATCA  641

seq1  A  650
      |
seq2  A  642