BAC Information

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BAC

Clone NameB6Ng01-094M15
Chromosome1 (Build37)
Map Location 130,764,316 - 130,765,292
singlet/doubletsinglet
Overlap genenone
Upstream geneRab3gap1, Zranb3, LOC666778, LOC100042670, EG666784, R3hdm1, LOC667109, LOC100042111, Ubxd2, Lct, Mcm6, Dars, LOC620659, Cxcr4
Downstream geneLOC100042732, Thsd7b, LOC100042745, LOC100042740
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094M15.bB6Ng01-094M15.g
ACCDH905913DH905914
length1,2111,127
definitionDH905913|Mus musculus domesticus DNA, BAC clone: B6Ng01-094M15, 5' end.DH905914|Mus musculus domesticus DNA, BAC clone: B6Ng01-094M15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaacacatgaacccaagggccattctcactcaaaccatcacatt
ctactctctggatcccatatactggtagccatgtcatgatgcaaaatgca
tctgtgcaacttcaaaagtttccctagttgttcatgatctcaactgctta
aaaattcaaagtcttttttgagagtcaaagcaatcttttaattttaaccc
ccttgtaatatcaaaaataaaaattgcatacttccaacattattcattat
agaatatgtattaccatttccaaagggagaaatagaagcatggtaaggag
atactggaataaagcaagagcaaaacctggaagggcaaactccaaatcct
atagttctgtgtccaaagtcaaaagcttagatggttctacccttccagct
gcactgactgcaaagccttctctctattggcctggtcccactccttggct
gcacctctccctagcagacatccacatctctggctgctctaatattctgt
gatctccagtgcaatccaggctttactttcactttttcatacaatgactt
ctcagggcctccatgcacgaacttcacttccacatgcctgatctcaatgg
ctttccttattcactgaggaaggttctacaacctttttactcctaagtcc
atcatgactctactgtcataatcacatgtcctgtgctgtcaggtttggtc
acctgcttgagatgaaacctggtcctgccttctgttacattttgcataag
ctttcttttgctgctctttagacataactccattggtctttttcttccgc
tggttccagaattggctgggtggggtcctgccctgatagcaccattccct
atattccatctcatatcagccttcccttatctctttcatcgcaagccttg
ccccaacattaaattttctggtgctgtatttctctccagactgtacattt
tgtatttctttttaccaactgttcttttccattgcagccttgcatagatg
atgactatactacaagaaaaaatcattagactcttgaatctcatctgaca
acaagtttgtccaagctttcagctcgaagaaatcctaggacaagggagaa
aaaaactgtccattcttatcgaattcaggacttattagcccctactaatg
acttcgaatctagctgacttcagtcattaccgtaatatcacggaatctag
agcctgggtac
gaattcctacctctagaagctagctctgctttggatctttgattttggga
gcaatccattaggaagagttcagaatagggtagggtggactcttaattcc
atatgaccttaagagaagtaatgttcttataggaaaaggaaggacacaga
gacagtcccacagggagaaaagagccctgtgaggatggaggcagggttct
ctagaggaatagaactgatagaataaatctatattatgaaggagacttat
tggcgtgtacagggtagttcaaaaatggtcctctacacacaatgaacctc
tacaaggttgagactatgggagctactcagcccatgagactggactactc
aacagctccaatctggcactgaaggcttgggggatttcagaagcatttgc
attagaaaactgaagagctgagctgtgatgccagtgaagggcagcagcaa
cagagtgacagtcacagtgcaggtacactcacatgcaggaaatgcaacac
tgatgttcctctgtatatctgggctcctgttggaaagtgtcccccatcct
gggaagggccttctgccctcatctctccccagctaatcccttttggaaat
gctatttcagaggcacacctcttcgttgattctggagccaatcaagttga
caatgaagattaaccatgacaagggtaatacatcaaccagccattggtta
ttcacacattgggttctgcaaacttccaagggcaagggcttcctccagaa
tgcaggagctgggagaggccgtgataccctggagtccttaaggagaagag
atatgccgatgttgtactcttactctctgggctatggaagtttatgagac
atggtttctgtagcccttcatttggtggctgagggaacacaggtactgtc
tcgcagacacatactttgtgagttgccatgtttgagacgaccgatgatga
cgacgccaggcagcctgtcctctccaccagcccatcacagaggagaacag
taaactaacggacaagacctcagcaggtagcactcaggcgtgatcagatc
ccatcataggaattatcagctgccatttagaataatcagtctgccctcag
ttcaccttatggctccagtactgccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_130764316_130765292
seq2: B6Ng01-094M15.g_244_1196

seq1  CCCTGTGAGGATGGAGGCAGGGTTCTCTAGAGGAATAGAACTGATAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGAGGATGGAGGCAGGGTTCTCTAGAGGAATAGAACTGATAGAAT  50

seq1  AAATCTATATTATGAAGGAGACTTATTGGCGTGTACAGGGTAGTTCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATATTATGAAGGAGACTTATTGGCGTGTACAGGGTAGTTCAAAA  100

seq1  ATGGTCCTCTACACACAATGAACCTCTACAAGGTTGAGACTATGGGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCCTCTACACACAATGAACCTCTACAAGGTTGAGACTATGGGAGCT  150

seq1  ACTCAGCCCATGAGACTGGACTACTCAACAGCTCCAATCTGGCACTGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCCCATGAGACTGGACTACTCAACAGCTCCAATCTGGCACTGAAG  200

seq1  GCTTGGGGGATTTCAGAAGCATTTGCATTAGAAAACTGAAGAGCTGAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGGGATTTCAGAAGCATTTGCATTAGAAAACTGAAGAGCTGAGCT  250

seq1  GTGATGCCAGTGAAGGGCAGCAGCAACAGAGTGACAGTCACAGTGCAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGCCAGTGAAGGGCAGCAGCAACAGAGTGACAGTCACAGTGCAGGT  300

seq1  ACACTCACATGCAGGAAATGCAACACTGATGTTCCTCTGTATATCTGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCACATGCAGGAAATGCAACACTGATGTTCCTCTGTATATCTGGGC  350

seq1  TCCTGTTGGAAAGTGTCCCCCATCCTGGGAAGGGCCTTCTGCCCTCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTGGAAAGTGTCCCCCATCCTGGGAAGGGCCTTCTGCCCTCATCT  400

seq1  CTCCCCAGCTAATCCCTTTTGGAAATGCTATTTCAGAGGCACACCTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAGCTAATCCCTTTTGGAAATGCTATTTCAGAGGCACACCTCTTC  450

seq1  GTTGATTCTGGAGCCAATCAAGTTGACAATGAAGATTAACCATGACAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTCTGGAGCCAATCAAGTTGACAATGAAGATTAACCATGACAAGG  500

seq1  GTAATACATCAACCAGCCATTGGTTATTCACACATT-GGTTCTGCAAACT  549
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTAATACATCAACCAGCCATTGGTTATTCACACATTGGGTTCTGCAAACT  550

seq1  TCCAAGGGCAAGGGCTTCCTCCAGAATGCAGGAGCTGGGAGAGGCCGTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGGCAAGGGCTTCCTCCAGAATGCAGGAGCTGGGAGAGGCCGTGA  600

seq1  TACCCTGGAGTCCTTAAGGGAGAAGAGATATGCCGATGTTGTACTCTTAC  649
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TACCCTGGAGTCCTTAA-GGAGAAGAGATATGCCGATGTTGTACTCTTAC  649

seq1  TCTCTGGGCTAT-GAAGTTTATGAGACAATGGTTTCTGTAGCCCTTCATT  698
      |||||||||||| |||||||||||||| ||||||||||||||||||||||
seq2  TCTCTGGGCTATGGAAGTTTATGAGAC-ATGGTTTCTGTAGCCCTTCATT  698

seq1  TGGTGGCTGAGGGAACACAGGTACTGTCTCGCAAGACACATACTTTGTGA  748
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGGTGGCTGAGGGAACACAGGTACTGTCTCGC-AGACACATACTTTGTGA  747

seq1  GGTTGCCATGGTTTGAAGACGACCGGAATGATGACAGACGCCAGGCAGCC  798
       |||||||| ||||| |||||||||  |||||||| ||||||||||||||
seq2  -GTTGCCAT-GTTTG-AGACGACCG--ATGATGAC-GACGCCAGGCAGCC  791

seq1  TTGTTCCTCTCCACCAGGCCCCATCACAGAGGAAGAACAGTTACACCAAA  848
      |   |||||||||||||  ||||||||||||| ||||||| || || || 
seq2  T--GTCCTCTCCACCAG--CCCATCACAGAGG-AGAACAG-TAAACTAA-  834

seq1  CCAGACAAGACCTCAGCCAAGTAAGCACCTCA-GCGTGATCAAGATTCCC  897
       | ||||||||||||||  ||  |||| |||| |||||||| ||||  ||
seq2  -CGGACAAGACCTCAGC--AGGTAGCA-CTCAGGCGTGATC-AGAT--CC  877

seq1  CATCTATAG--ATTATCACCTGGCACATTTAGGATAAATCAGTCTTGCCT  945
      |||| ||||  ||||||| |||   ||||||| || |||||||||  |||
seq2  CATC-ATAGGAATTATCAGCTG--CCATTTAGAAT-AATCAGTCTGCCCT  923

seq1  CAGTTCACTCTAT-GCTCCAGGTTACTGGCCAG  977
      ||||||||  ||| |||||||  |||| |||||
seq2  CAGTTCACCTTATGGCTCCAG--TACT-GCCAG  953