BAC Information

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BAC

Clone NameB6Ng01-094O03
Chromosome1 (Build37)
Map Location 113,623,326 - 113,624,010
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh19
Downstream geneEG666578, Dsel, LOC547247, EG626897, LOC666615
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094O03.bB6Ng01-094O03.g
ACCDH905977DH905978
length1,1411,014
definitionDH905977|Mus musculus domesticus DNA, BAC clone: B6Ng01-094O03, 5' end.DH905978|Mus musculus domesticus DNA, BAC clone: B6Ng01-094O03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagggctcttctatatgatgagcttccagctgttcctggacta
gctgtactaatgcctgtagtttttctgttgtcatagaccattgatctata
taaatgggttggacctttgtggaaaggctgttggtttcttggcagcagtg
gttccttggggtagggctaaattctcagcctctgttatatcttgtttgtg
gtcagcttggacagtctgtaactgcctttgatagcattctctaactaact
tgaaatttttattaggagcctaatggtttcatggctagacactgaaactg
agatgatattaatttgggttttcttctgctgtaatagatctctttcccat
aagttaatggctatattaaccatgtatggtctcaatttccctacatggcc
ttctgtttcttcccatttaagccaactgctatgttgttttatgagggata
aggttccaaatccttgaaaatttatgtctacttcttgaagtggccaactt
tcaggccaagattttagagagataatggtaacatctgctccagtgtcaac
cattgcttcaatctcaatattgtttactagtattcttagtattgcccttt
gattctctatagaagtttgccaaaatagtaatttttggttccctttatgg
ccttttttattgcctttcttactgctgaatctgatatattcctttccaca
gctgaggatagcctatgtaaaaagtcaaggaatgtttctttcagaccttg
tatgacttaaataaatggttgaagatagatagatagatagatagatagat
agatagatagatagatagatagatatcttgattctgcgacttgtcccagg
ccgttagactgacaatgacacaatgccagagtttctttatcatatactgc
ctgtacctctatctaacaaagcaacctttactagtggtgatctggtggaa
atctctcccctcggctctaatttgttgtggtatcccccctggcctccaca
ctccacctgcccaccattgtagatttatcagttaggatataatattaatc
tatccacatcttccatgctttggggaagtttacttttaataagccagagc
agagatttatatcaatgagggactcaatatacaaacagtat
gaattcccagaatatctctctgcagtgactcacagtaagactcctagata
taggggatatggagcccaatggggtcaccttctgtagcaggcattaaccc
cagtggagggataagttcatcaaaacacacacaaaatctttgacccaaaa
cgtgccctgcctccaagacatgcaaaggcaaagatagaccagaggtgggg
gagatggctaacaaatgactgccataactttcgacctatgccatggaaaa
gaaccaatccctgacactattgatgctacaaccttatgcttgcagacagg
accctagggtaactgtcctctaagaggttccaccaaacatccaatgaaaa
catgcagagccacagccaaatcattggattgagctagtagagtcctgtgg
aagacttgtaggaagaattgatgaaccaaaagaggaaaagagctccactg
gaagatgagcagagtcaactaccctggactcatgggagctcccagactga
actatcaatcaaagagcaagcatggcctggacctaggccccctgtacata
tgtagcaaatatgatgtttgttcttcatgtgggtctcacaaaaatagtgc
aggggctgtccttgaatctgttgcctacatgtggatcctgttcttctaac
tggactgccttttctagcctcagttggagaggatatgcccagtgatctga
tgtgctaggatggggtgatatctaggagggggatcttcctactcagagga
aaatgggaagagggatgttgagaggggctgtcaaaggacatggattgcta
taatcagatggaaaatggataaattaattaatgaaaacaaaacttacctg
acaaaataaagacaccaatatgtattgtgcatctttaacatgagctatat
acatcaggactgtagtcttaataacagtggacatcaggagagtatggaga
caagcccatataaaggtataagattttatgggtattgttgtggaacagtc
cgagggggatgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_113623326_113624010
seq2: B6Ng01-094O03.g_402_1082

seq1  CAAACATCCAATGAAAACATGCAGAGCCACAGCCAAATCATTGGATTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATCCAATGAAAACATGCAGAGCCACAGCCAAATCATTGGATTGAG  50

seq1  CTAGTAGAGTCCTGTGGAAGACTTGTAGGAAGAATTGATGAACCAAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAGAGTCCTGTGGAAGACTTGTAGGAAGAATTGATGAACCAAAAGA  100

seq1  GGAAAAGAGCTCCACTGGAAGATGAGCAGAGTCAACTACCCTGGACTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGAGCTCCACTGGAAGATGAGCAGAGTCAACTACCCTGGACTCAT  150

seq1  GGGAGCTCCCAGACTGAACTATCAATCAAAGAGCAAGCATGGCCTGGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCTCCCAGACTGAACTATCAATCAAAGAGCAAGCATGGCCTGGACC  200

seq1  TAGGCCCCCTGTACATATGTAGCAAATATGATGTTTGTTCTTCATGTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCCCCTGTACATATGTAGCAAATATGATGTTTGTTCTTCATGTGGG  250

seq1  TCTCACAAAAATAGTGCAGGGGCTGTCCTTGAATCTGTTGCCTACATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAAAAATAGTGCAGGGGCTGTCCTTGAATCTGTTGCCTACATGTG  300

seq1  GATCCTGTTCTTCTAACTGGACTGCCTTTTCTAGCCTCAGTTGGAGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGTTCTTCTAACTGGACTGCCTTTTCTAGCCTCAGTTGGAGAGGA  350

seq1  TATGCCCAGTGATCTGATGTGCTAGGATGGGGTGATATCTAGGAGGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCAGTGATCTGATGTGCTAGGATGGGGTGATATCTAGGAGGGGGA  400

seq1  TCTTCCTACTCAGAGGAAAAGGGGAAGAGGGATGTTGAGAGGGGCTGTCA  450
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCTTCCTACTCAGAGGAAAATGGGAAGAGGGATGTTGAGAGGGGCTGTCA  450

seq1  AAGGACAGGGATTGCTATAATCAGAATGGAAAGTGAATAAATTAATTAAT  500
      ||||||| |||||||||||||||| ||||||| || ||||||||||||||
seq2  AAGGACATGGATTGCTATAATCAG-ATGGAAAATGGATAAATTAATTAAT  499

seq1  GAAAACAAAACCTACCTGACAAAATAAAAGAACACCAATATGTAATTGTG  550
      ||||||||||| ||||||||||||||||   |||||||||||| ||||||
seq2  GAAAACAAAACTTACCTGACAAAATAAA--GACACCAATATGT-ATTGTG  546

seq1  CATCTTAGACATGAGCTATATACATCAGGACTGTAGTCTTAATAACAGT-  599
      ||||||  ||||||||||||||||||||||||||||||||||||||||| 
seq2  CATCTTTAACATGAGCTATATACATCAGGACTGTAGTCTTAATAACAGTG  596

seq1  GACATCAGGAGAGTACTGGAGACAAG-CCATATAAAGTAATAAGA-TTTA  647
      ||||||||||||||| |||||||||| ||||||||||  |||||| ||||
seq2  GACATCAGGAGAGTA-TGGAGACAAGCCCATATAAAGGTATAAGATTTTA  645

seq1  TGGGTATGGAATGTGGAACAGTCAGAGGGTGGATGGGA  685
      ||||||| |  |||||||||||| ||||| ||||| ||
seq2  TGGGTATTG-TTGTGGAACAGTCCGAGGG-GGATGAGA  681