BAC Information

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BAC

Clone NameB6Ng01-094P09
Chromosome1 (Build37)
Map Location 122,184,311 - 122,296,257
singlet/doubletdoublet
Overlap geneC1ql2
Upstream geneInhbb, Ralb, Tmem185b, Epb4.1l5, Ptpn4, LOC100042447, LOC666870, LOC100041863, Tmem177, Gm101, Sctr, Tmem37, Dbi, 3110009E18Rik, Steap3
Downstream geneMarco, En1, AI848258, Insig2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094P09.bB6Ng01-094P09.g
ACCDH906030DH906031
length1,083335
definitionDH906030|Mus musculus domesticus DNA, BAC clone: B6Ng01-094P09, 5' end.DH906031|Mus musculus domesticus DNA, BAC clone: B6Ng01-094P09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,295,154 - 122,296,257)(122,184,311 - 122,184,645)
sequence
gaattcaccaagtaagctacggtggctggtccgcaagtcccaggcatcct
cctgctctctcctgctaggattacaagcacccaccactataccagctgtg
ttttaaagggctctagagatgcatctaaggttcctgtgcttgcaaggcca
gcccttcacctactgagcatctcccagccataaaatatacttcatatata
tccctctgcctaaagttcttgggaggtgccactaccttactttatagatg
catctcatcaaggtgaagacacttggccaatgtcacaatgaaaaccagag
gatgaggctctagccggcctgggtttgtgtgaccccaaggctggcaatga
tccttccagctaaaactggctgtgaactctctcatggcattatgtttgga
gcaaatgtgggggcataaggaggggccacactcctaacggaaggatggtg
gttaaggctaacagagacgaacaggccccacagaacacaaccctcccctg
ttactattggtaatgtgtttgtaaatgtgtggacatgatgtgttttgtgg
gggcaagaggccaacttgggagtatcggttgtgtactctatttgggatca
ggcttaggccaccagacttctgtgacaagtgcctatactttctgagccac
ctcactgccccacagacttccccatctttctatctcatctcagcaagccc
gttgatccacttctttgagaccaccagcactggagccagctgctgcttgg
acacccgctacagaacagaaagttagctaaagcttaggcgagcaggagtc
ttttctgccattccccctcctgccccttgcagcccccagagggctctgca
ggctgaccggaggcggagcacagaggcagggatggaggttatggctggga
cccttgggaaatgcccctcaagccctttccctgacagaacctgaatgcca
gcattaatatcattcctctgggttagtgtttcctcgctgggtccctttta
aattcaatgcatctttgagagacagacactggtgctctgatcaatgtact
ggattgatgaggaagagcacctgcctttgggag
cttcccatcaccatgagtctgctcatggtcataaaatacaagatgacact
agatttgctcattaagtaaatgggataaccaaataattgagaaatggatc
cttgtccggaaggagtggaattgttccctgggctattgtctgtgtcctgc
ttactgagtagtctgccagagacaggcagacagtgtcaggatcaggagtg
atgagaaactgtgttaaaaagagccggaaattaccagcggctgtaacaag
agcctttgtttcctgagaagaaggagctaaaagggcccttagtgttttct
tggggtggggttgcggggtggcatgggggtggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_122295154_122296257
seq2: B6Ng01-094P09.b_49_1131 (reverse)

seq1  CTCCCAGAGAGCAGCTGCTCTTCCCTTCACTCAATTCCAGTACATTTGAT  50
      |||||| || |||| |||||||||  ||| |||| ||||||||| |||| 
seq2  CTCCCAAAG-GCAGGTGCTCTTCC--TCA-TCAA-TCCAGTACA-TTGA-  43

seq1  TCAGAGCCACAAGTGTCTGTTCCTCTCCAAAGATGCATTTGAATTTTAAA  100
      |||||| ||| |||||||||  |||| |||||||||| ||||||||  ||
seq2  TCAGAG-CACCAGTGTCTGT--CTCT-CAAAGATGCA-TTGAATTT--AA  86

seq1  AAGGGACCCCAGCGAGGAAACACTTAACCCAGAGGAATGAATATTTAATG  150
      |||||| |||||||||||||||| ||||||||||||||| ||| ||||||
seq2  AAGGGA-CCCAGCGAGGAAACAC-TAACCCAGAGGAATG-ATA-TTAATG  132

seq1  CTGGCATTTCAGGTTCTGTCAGGGGAAAGGGCTTGGAGGGGCATTTCCCA  200
      |||||| |||||||||||||| |||||||||||| |||||||||||||||
seq2  CTGGCA-TTCAGGTTCTGTCA-GGGAAAGGGCTT-GAGGGGCATTTCCCA  179

seq1  AGGGTCCCAGCCAT-ACCTCCATCCCTGCCTCTGTGCTCCGCCTCCGGTC  249
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGGGTCCCAGCCATAACCTCCATCCCTGCCTCTGTGCTCCGCCTCCGGTC  229

seq1  AGCCTGCAGAGCCCTCTGGGGGCTGCAAGGGGCAGGAGGGGGAATGGCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCAGAGCCCTCTGGGGGCTGCAAGGGGCAGGAGGGGGAATGGCAG  279

seq1  AAAAGACTCCCTGCTCGCCTAAGCTTTAGCTAACTTTCTGTTCTGTAGCG  349
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACT-CCTGCTCGCCTAAGCTTTAGCTAACTTTCTGTTCTGTAGCG  328

seq1  GGTGTCCAAGCAGCAGCTGGCTCCAGTGCTGGTGGTCTCAAAGAAGTGGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCAAGCAGCAGCTGGCTCCAGTGCTGGTGGTCTCAAAGAAGTGGA  378

seq1  TCAACGGGCTTGCTGAGATGAGATAGAAAGATGGGGAAGTCTGTGGGGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGGGCTTGCTGAGATGAGATAGAAAGATGGGGAAGTCTGTGGGGCA  428

seq1  GTGAGGTGGCTCAGAAAGTATAGGCACTTGTCACAGAAGTCTGGTGGCCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTGGCTCAGAAAGTATAGGCACTTGTCACAGAAGTCTGGTGGCCT  478

seq1  AAGCCTGATCCCAAATAGAGTACACAACCGATACTCCCAAGTTGGCCTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGATCCCAAATAGAGTACACAACCGATACTCCCAAGTTGGCCTCT  528

seq1  TGCCCCCACAAAACACATCATGTCCACACATTTACAAACACATTACCAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCACAAAACACATCATGTCCACACATTTACAAACACATTACCAAT  578

seq1  AGTAACAGGGGAGGGTTGTGTTCTGTGGGGCCTGTTCGTCTCTGTTAGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAGGGGAGGGTTGTGTTCTGTGGGGCCTGTTCGTCTCTGTTAGCC  628

seq1  TTAACCACCATCCTTCCGTTAGGAGTGTGGCCCCTCCTTATGCCCCCACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCACCATCCTTCCGTTAGGAGTGTGGCCCCTCCTTATGCCCCCACA  678

seq1  TTTGCTCCAAACATAATGCCATGAGAGAGTTCACAGCCAGTTTTAGCTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCCAAACATAATGCCATGAGAGAGTTCACAGCCAGTTTTAGCTGG  728

seq1  AAGGATCATTGCCAGCCTTGGGGTCACACAAACCCAGGCCGGCTAGAGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATCATTGCCAGCCTTGGGGTCACACAAACCCAGGCCGGCTAGAGCC  778

seq1  TCATCCTCTGGTTTTCATTGTGACATTGGCCAAGTGTCTTCACCTTGATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTCTGGTTTTCATTGTGACATTGGCCAAGTGTCTTCACCTTGATG  828

seq1  AGATGCATCTATAAAGTAAGGTAGTGGCACCTCCCAAGAACTTTAGGCAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCATCTATAAAGTAAGGTAGTGGCACCTCCCAAGAACTTTAGGCAG  878

seq1  AGGGATATATATGAAGTATATTTTATGGCTGGGAGATGCTCAGTAGGTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATATATATGAAGTATATTTTATGGCTGGGAGATGCTCAGTAGGTGA  928

seq1  AGGGCTGGCCTTGCAAGCACAGGAACCTTAGATGCATCTCTAGAGCCCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGGCCTTGCAAGCACAGGAACCTTAGATGCATCTCTAGAGCCCTT  978

seq1  TAAAACACAGCTGGTATAGTGGTGGGTGCTTGTAATCCTAGCAGGAGAGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACACAGCTGGTATAGTGGTGGGTGCTTGTAATCCTAGCAGGAGAGA  1028

seq1  GCAGGAGGATGCCTGGGACTTGCGGACCAGCCACCGTAGCTTACTTGGTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGGATGCCTGGGACTTGCGGACCAGCCACCGTAGCTTACTTGGTG  1078

seq1  AATTC  1104
      |||||
seq2  AATTC  1083

seq1: chr1_122184311_122184645
seq2: B6Ng01-094P09.g_77_411

seq1  CTTCCCATCACCATGAGTCTGCTCATGGTCATAAAATACAAGATGACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCATCACCATGAGTCTGCTCATGGTCATAAAATACAAGATGACACT  50

seq1  AGATTTGCTCATTAAGTAAATGGGATAACCAAATAATTGAGAAATGGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGCTCATTAAGTAAATGGGATAACCAAATAATTGAGAAATGGATC  100

seq1  CTTGTCCGGAAGGAGTGGAATTGTTCCCTGGGCTATTGTCTGTGTCCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCGGAAGGAGTGGAATTGTTCCCTGGGCTATTGTCTGTGTCCTGC  150

seq1  TTACTGAGTAGTCTGCCAGAGACAGGCAGACAGTGTCAGGATCAGGAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAGTAGTCTGCCAGAGACAGGCAGACAGTGTCAGGATCAGGAGTG  200

seq1  ATGAGAAACTGTGTTAAAAAGAGCCGGAAATTACCAGCGGCTGTAACAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAACTGTGTTAAAAAGAGCCGGAAATTACCAGCGGCTGTAACAAG  250

seq1  AGCCTTTGTTTCCTGAGAAGAAGGAGCTAAAAGGGCCCTTAGTGTTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTGTTTCCTGAGAAGAAGGAGCTAAAAGGGCCCTTAGTGTTTTCT  300

seq1  TGGGGTGGGGTTGCGGGGTGGCATGGGGGTGGAGT  335
      |||||||||||||||||||||||||||||||||||
seq2  TGGGGTGGGGTTGCGGGGTGGCATGGGGGTGGAGT  335