BAC Information

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BAC

Clone NameB6Ng01-095B04
Chromosome1 (Build37)
Map Location 26,806,561 - 26,978,874
singlet/doubletdoublet
Overlap genenone
Upstream geneBai3, 4931408C20Rik
Downstream geneLOC677427, LOC100040952, EG433281
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095B04.bB6Ng01-095B04.g
ACCDH906111DH906112
length1,2651,029
definitionDH906111|Mus musculus domesticus DNA, BAC clone: B6Ng01-095B04, 5' end.DH906112|Mus musculus domesticus DNA, BAC clone: B6Ng01-095B04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,977,573 - 26,978,874)(26,806,561 - 26,807,604)
sequence
gaattcttattaaaatgaaacagaaaatgcacttccctgccttgctatga
acacaggtacctctggatgtacatgctcctggcaaatgtgcctcaggatg
ttgctgaacacactagtgaattatatttgcatctggcaggactcatcaga
gggtacagtccgtgcaatttagttatcccttcataattacaagtgagaca
tgcaattgatttagacaatgcaaacaatgttcttttcagttttgtcttgt
tttctcttctgtactgctgtctgatatgagcagagagatcccaattggca
tggggcaaggtgaaccacgacttttggcatatggattcgagggataatag
gtaaggaatctggaaattcatgcactgttaaaagaaaattgttctgggcc
tagaaaggtggctcattgaataatggtgcatagttcttgtctagagttga
gtcaacagttaaaatcacttgtttctctttgcagaagatctaacttcagt
tacaagcaatttcatagttgctcacaaacatcagtgactccaattctagc
agattctctgtctccttctagcacacttgggcatgtatacatatgtgaac
acacacacacacacacacactcacacacacactcatctgtgcacacacac
aagattaaaagttaaaataaaaacaaacaacgttctgtaaaaacaaaaaa
aagaactttgtatctttgtattatctgttagacataattgcactaatttt
aattttctttttcagcccaccttttatcaacttagtgtgtcatcaaaatt
gaaatataactctctgacagattactctgattattttaaattttaaaata
aaaactgaaattcagaatgtcagtaatggagaaccaacagccctctgatc
atggttttatagaagtcctcctacacaaaatatcaagattaaatgtgtgg
catgctgactcagtggctacagcaatgagaaatatttttttcatagagga
aatgtaaaatagcgttaatatcattaagataactggatataaaaaagtgc
actggaatgtgagaacaaactgtatactgagatgactaaaagttgtgtgt
aatacatgagtgacatcctcctactggatgtctacatatagatgacattg
atctgtggagcagtgggacaattgtggtaaagcatatgtttgaaacttag
caggttagtcatgaagagcctaatgtcctgaaaattctaattcacagtgc
ttccagtcttgggaa
gaattcattggtgctttgtagacacttggtttcagtttgctgtgttttta
tgtcgtttttcttccaagtcttttgtgtgctttgggtttttgtgtttggt
tgttgttgtttcttgtttttctattattgtttttacttattattttcttt
ttcttttttgacctagaggaaaaaaataaataaattggctgtgtagaaag
gaagggaatatatgggagaaactgggaagaggagaaaatacgaacaaaat
atattttatgaaaaaactgttttaagttaaaaacaaaacaaaacaaagca
aaactgtgtaacatccctttctgtgagaacttccactgtagcttccacta
gggctaaccaaaattttccttcatcccatatgaaatccctggagaaattc
caatttttagggttcatttctttttatagccaagataagggacacaattg
tgtctttagaatatcttcattatcgccaaaatggttataaaagtgttttg
gcaaaaactgtgcaaagattatctctatgatatgtgaaaatctgaagaga
aaaataatgggaacacttgagaattgctgcttctttttgtacacagaagg
tgaatatgagttctttagtgtagaagcagagaaccaagtgttcaaataaa
cagtttttgtatgtatgcctgtatgtatgtatgcatgtatgtatgtttat
gtatgtaaattttgtatggataaagaactacatacatgtatgttagctca
aagtagtttgaaatgggaatttaaacctaagaacaaatattattttagga
agaacttgactttttctcttatctgacagattctgcctataagatttagc
atcaatgaacacactatcctccagaagccagaagcaaggatgttttacat
tgtgcagcatttggttctgcctcggatcactttcagtatctacttctcaa
ttaaactgacagcattattgtgtagtcacatgaatatttcactggttgca
ttatgggaaatctataccaactcgatacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_26977573_26978874
seq2: B6Ng01-095B04.b_44_1308 (reverse)

seq1  TTCCTAAGACTGGAAGCATGCTGAAATTAGAAATATTTTCATGCATTTAT  50
      |||| |||||||||||||   || |||||||   ||||||| |   ||| 
seq2  TTCCCAAGACTGGAAGCACTGTG-AATTAGA---ATTTTCAGGACATTAG  46

seq1  GACCCTTCTTCCATTGACTAACACCTGGGCTAAAGATTC-TACATATTGC  99
      |     |||||   ||||||  ||||  ||| ||| |||  ||||| |||
seq2  G----CTCTTC--ATGACTA--ACCT--GCT-AAGTTTCAAACATA-TGC  84

seq1  TTTTAAACTATCAATATTATTTCCTACTTGCT-CACAGAATCCATGGTCA  148
      |||   || | ||||    | ||| || |||| ||||| ||| || ||||
seq2  TTT---ACCA-CAAT----TGTCCCAC-TGCTCCACAG-ATCAAT-GTCA  123

seq1  TCTATTAATGTTATGACATCCAGTAGGAAGGATGTCACTTCATGTATTTA  198
      |||||  ||||   ||||||||||||| |||||||||| |||||||||  
seq2  TCTAT--ATGT--AGACATCCAGTAGG-AGGATGTCAC-TCATGTATT--  165

seq1  ACACACAACTCTTAGTCATACTTCAGTATACAGTTTTGTCTTCACATTCC  248
      |||||||||| ||||||||   ||||||||||| |||||  |||||||||
seq2  ACACACAACTTTTAGTCAT--CTCAGTATACAG-TTTGTTCTCACATTCC  212

seq1  AGTGCACTATTTTATATCCAGTTATCTTAATGATTATTAACGCTATTTTA  298
      |||||||| |||||||||||||||||||||||| ||||||||||||||||
seq2  AGTGCACTTTTTTATATCCAGTTATCTTAATGA-TATTAACGCTATTTTA  261

seq1  CATTTCCTCTATG-AAAAAATATTTCTCATTGCTGTAGCCACTGAGTCAG  347
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTCTATGAAAAAAATATTTCTCATTGCTGTAGCCACTGAGTCAG  311

seq1  CATGCCACACATTTAATCTTTGATATTTTGTGTAGGAGGACTTCTATAAA  397
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CATGCCACACATTTAATC-TTGATATTTTGTGTAGGAGGACTTCTATAAA  360

seq1  ACCATGATCAGAGGGCTGTTGGTTCTCCATTACTGACATTCTGAATTTCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGATCAGAGGGCTGTTGGTTCTCCATTACTGACATTCTGAATTTCA  410

seq1  GTTTTTATTTTAAAATTTAAAATAATCAGAGTAATCTGTCAGAGAGTTAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTATTTTAAAATTTAAAATAATCAGAGTAATCTGTCAGAGAGTTAT  460

seq1  ATTTCAATTTTGATGACACACTAAGTTGATAAAAGGTGGGCTGAAAAAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAATTTTGATGACACACTAAGTTGATAAAAGGTGGGCTGAAAAAGA  510

seq1  AAATTAAAATTAGTGCAATTATGTCTAACAGATAATACAAAGATACAAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAATTAGTGCAATTATGTCTAACAGATAATACAAAGATACAAAG  560

seq1  TTCTTTTTTTTGTTTTTACAGAACGTTGTTTGTTTTTATTTTAACTTTTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTGTTTTTACAGAACGTTGTTTGTTTTTATTTTAACTTTTA  610

seq1  ATCTTGTGTGTGTGCACAGATGAGTGTGTGTGTGAGTGTGTGTGTGTGTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTGTGTGTGCACAGATGAGTGTGTGTGTGAGTGTGTGTGTGTGTG  660

seq1  TGTGTGTTCACATATGTATACATGCCCAAGTGTGCTAGAAGGAGACAGAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTCACATATGTATACATGCCCAAGTGTGCTAGAAGGAGACAGAG  710

seq1  AATCTGCTAGAATTGGAGTCACTGATGTTTGTGAGCAACTATGAAATTGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCTAGAATTGGAGTCACTGATGTTTGTGAGCAACTATGAAATTGC  760

seq1  TTGTAACTGAAGTTAGATCTTCTGCAAAGAGAAACAAGTGATTTTAACTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACTGAAGTTAGATCTTCTGCAAAGAGAAACAAGTGATTTTAACTG  810

seq1  TTGACTCAACTCTAGACAAGAACTATGCACCATTATTCAATGAGCCACCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCAACTCTAGACAAGAACTATGCACCATTATTCAATGAGCCACCT  860

seq1  TTCTAGGCCCAGAACAATTTTCTTTTAACAGTGCATGAATTTCCAGATTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGCCCAGAACAATTTTCTTTTAACAGTGCATGAATTTCCAGATTC  910

seq1  CTTACCTATTATCCCTCGAATCCATATGCCAAAAGTCGTGGTTCACCTTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTATTATCCCTCGAATCCATATGCCAAAAGTCGTGGTTCACCTTG  960

seq1  CCCCATGCCAATTGGGATCTCTCTGCTCATATCAGACAGCAGTACAGAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGCCAATTGGGATCTCTCTGCTCATATCAGACAGCAGTACAGAAG  1010

seq1  AGAAAACAAGACAAAACTGAAAAGAACATTGTTTGCATTGTCTAAATCAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAAGACAAAACTGAAAAGAACATTGTTTGCATTGTCTAAATCAA  1060

seq1  TTGCATGTCTCACTTGTAATTATGAAGGGATAACTAAATTGCACGGACTG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGTCTCACTTGTAATTATGAAGGGATAACTAAATTGCACGGACTG  1110

seq1  TACCCTCTGATGAGTCCTGCCAGATGCAAATATAATTCACTAGTGTGTTC  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCTGATGAGTCCTGCCAGATGCAAATATAATTCACTAGTGTGTTC  1160

seq1  AGCAACATCCTGAGGCACATTTGCCAGGAGCATGTACATCCAGAGGTACC  1247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACATCCTGAGGCACATTTGCCAGGAGCATGTACATCCAGAGGTACC  1210

seq1  TGTGTTCATAGCAAGGCAGGGAAGTGCATTTTCTGTTTCATTTTAATAAG  1297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCATAGCAAGGCAGGGAAGTGCATTTTCTGTTTCATTTTAATAAG  1260

seq1  AATTC  1302
      |||||
seq2  AATTC  1265

seq1: chr1_26806561_26807604
seq2: B6Ng01-095B04.g_70_1098

seq1  GAATTCATTGGTGCTTTGTAGACACTTGGTTTCAGTTTGCTGTGTTTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGTGCTTTGTAGACACTTGGTTTCAGTTTGCTGTGTTTTTA  50

seq1  TGTCGTTTTTCTTCCAAGTCTTTTGTGTGCTTTGGGTTTTTGTGTTTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGTTTTTCTTCCAAGTCTTTTGTGTGCTTTGGGTTTTTGTGTTTGGT  100

seq1  TGTTGTTGTTTCTTGTTTTTCTATTATTGTTTTTACTTATTATTTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTTCTTGTTTTTCTATTATTGTTTTTACTTATTATTTTCTTT  150

seq1  TTCTTTTTTGACCTAGAGGAAAAAAATAAATAAATTGGCTGTGTAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTGACCTAGAGGAAAAAAATAAATAAATTGGCTGTGTAGAAAG  200

seq1  GAAGGGAATATATGGGAGAAACTGGGAAGAGGAGAAAATACGAACAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAATATATGGGAGAAACTGGGAAGAGGAGAAAATACGAACAAAAT  250

seq1  ATATTTTATGAAAAAACTGTTTTAAGTTAAAAACAAAACAAAACAAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATGAAAAAACTGTTTTAAGTTAAAAACAAAACAAAACAAAGCA  300

seq1  AAACTGTGTAACATCCCTTTCTGTGAGAACTTCCACTGTAGCTTCCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTGTAACATCCCTTTCTGTGAGAACTTCCACTGTAGCTTCCACTA  350

seq1  GGGCTAACCAAAATTTTCCTTCATCCCATATGAAATCCCTGGAGAAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAACCAAAATTTTCCTTCATCCCATATGAAATCCCTGGAGAAATTC  400

seq1  CAATTTTTAGGGTTCATTTCTTTTTATAGCCAAGATAAGGGACACAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTTAGGGTTCATTTCTTTTTATAGCCAAGATAAGGGACACAATTG  450

seq1  TGTCTTTAGAATATCTTCATTATCGCCAAAATGGTTATAAAAGTGTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTAGAATATCTTCATTATCGCCAAAATGGTTATAAAAGTGTTTTG  500

seq1  GCAAAAACTGTGCAAAGATTATCTCTATGATATGTGAAAATCTGAAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAACTGTGCAAAGATTATCTCTATGATATGTGAAAATCTGAAGAGA  550

seq1  AAAATAATGGGAACACTTGAGAATTGCTGCTTC-TTTTGTACACAGAAGG  599
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAAATAATGGGAACACTTGAGAATTGCTGCTTCTTTTTGTACACAGAAGG  600

seq1  TGAATATGAGTTCTTTAGTGTAGAAGCAGAGAACCAAGTGTTCAAATAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATGAGTTCTTTAGTGTAGAAGCAGAGAACCAAGTGTTCAAATAAA  650

seq1  CAGTTTTTGTATGTATGCCTGTATGTATGTATGCATGTATGTATG-TTAT  698
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAGTTTTTGTATGTATGCCTGTATGTATGTATGCATGTATGTATGTTTAT  700

seq1  GTATGTAAATTTTGTATGGATAAAGAACTACATACATGTATGTTAGCTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTAAATTTTGTATGGATAAAGAACTACATACATGTATGTTAGCTCA  750

seq1  AAGTAGTTTGAAATGGGAATTTAAACCTAAGAACAAAATATTATTTTAGG  798
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGTAGTTTGAAATGGGAATTTAAACCTAAGAAC-AAATATTATTTTAGG  799

seq1  AAGAACTTGACTTTTTCTCTTATCTGACAAGATTCTGCCTATAAGATTTT  848
      |||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  AAGAACTTGACTTTTTCTCTTATCTGAC-AGATTCTGCCTATAAGA-TTT  847

seq1  AGCATCAATGAACACACTATCCTCCAGGAAGCCAAGAAGTCAAGGATGTT  898
      |||||||||||||||||||||||||| |||||| ||||| ||||||||||
seq2  AGCATCAATGAACACACTATCCTCCA-GAAGCC-AGAAG-CAAGGATGTT  894

seq1  TTACAATGTGCAGCATTTGGTTCTGCCTTCGGAGTCACTTTTCAGTATCT  948
      ||||| ||||||||||||||||||||| ||||| |||| |||||||||||
seq2  TTACATTGTGCAGCATTTGGTTCTGCC-TCGGA-TCAC-TTTCAGTATCT  941

seq1  ACCTTCTACAAATAAACTGACAGCAATATATGTGTAGTCACATGAAATTA  998
      | ||||| ||| ||||||||||||| ||| ||||||||||||||||  ||
seq2  A-CTTCT-CAATTAAACTGACAGCATTAT-TGTGTAGTCACATGAA--TA  986

seq1  TTTTCACTTGTTTGCATTATGGAAAATCCATACACAACTCAATACC  1044
       |||||| || ||||||||||| ||||| |||| |||||| |||||
seq2  -TTTCAC-TGGTTGCATTATGGGAAATCTATAC-CAACTCGATACC  1029