BAC Information

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BAC

Clone NameB6Ng01-095B23
Chromosome1 (Build37)6 (Build37)
Map Location 132,232,085 - 132,233,139106,660,348 - 106,660,404
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneThsd7b, LOC100042745, LOC100042740
Downstream geneDaf2, Cd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095B23.bB6Ng01-095B23.g
ACCDH906147DH906148
length1,051804
definitionDH906147|Mus musculus domesticus DNA, BAC clone: B6Ng01-095B23, 5' end.DH906148|Mus musculus domesticus DNA, BAC clone: B6Ng01-095B23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(132,232,085 - 132,233,139)(106,660,348 - 106,660,404)
sequence
gaattcccagaacaagtccaaattctgtgttccaatatggaagcagtttc
ataaagagtttgtttgtttgtttgtttgtttgtttgtttgtctgtctgtc
tgtctgtctgtctgtctgtctgtttgtttgtttgtttagagacagggttt
tactgtgtagccctggctgtcctggaactcactctatagaccaggctggc
ctcgaactcggaaacctgcctgcctctgcctcccaagtgctggaattaaa
ggcgtgtgccaccactgcccggctcataaggaatttaaagaacaggaaaa
caacaaaaagtcataaaggaagacagtacaaatgcacaggtggaaacgtg
attgcggctgcagaaagaccttagctataggcttcagatgctacctgatg
gcattcatagctttcagacggaaacttatagttggctaagctaatatatt
ccaaaagatttttagctgctaatcacaagatattagacctgacacggaag
gtgtcaaggaagggctatttaaggaattaaaggtggtctgaaacaaattg
tccttaggctctagatctgcaacattccaacttctctttatcattaagac
ttgaatcaatcagccttggcagacacagtttcttgtcaggaattctcctt
cacacctgtaagggaatgagctatgcaagcagaaggcccaggagactgta
gcttgaacactggctgggcaagttacagaaactttatgaatcttagtttt
tttttttttttatctatacagtgaaggctgggatttgttctcatatcatg
gtattttcatctttggagtaaaaacacatttaaaatatttttttataaca
tgcagcaggttcaattttcctcttaaattaaaaatattaaaggtgattaa
atgtagcaatgcatgtaaggagttttgaagtgataagtactagtgaggct
gagtatcattattttatttattgcattatgtcgaagcagattactgtgtt
tctattagcttctatgctgaccctcaaattgaagtcccaggacaaggtcc
c
gaattcctgatttttccaagacttttaacatgaagggatgctgaattttg
tcaaatgcgttttcagcatctaatgaattgatcatgtgattttttttttc
cttgagtttgtttgtgtagtggattacattgatggacttccatgtaatga
aacatccctgcatccctgtgatgaagcctacttgattgtagtgaatgatc
attttgatgtgttcttaaattcggttggctagagttttattgagtatttt
tgcatcaatgttcatacgggagattggtctgaagttctctttctttgttt
ggtcttttgtggtttaggtataagtgtaattgtgacttcatagaatgaat
tgggtagtgttccttctgtttctattttgtgggatagtgtgaagaatatt
ggtattaggtcttctttaaaggtctgatagaattctccactaaacccatc
tggtcctgggcttttttttggttgggagactattaacgactgcttctgtt
tctttaggggttatgggactgtttagatgatttatctaatcctgttttaa
ctttggcaccttgtatgtctagaaaattgtctatttcatccagattttcc
aatttagttgagtataaacttttgtagtaggatttgatgatttttgaatt
tccatggtttccattgttatgtctcccttttcttttttttaaaaacaatt
ttttattagatattttcttcattctatgtctccctttcatttctgattta
ttaatttgggatactgtctctatgccctctgggttagtctggctaagagg
ttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132232085_132233139
seq2: B6Ng01-095B23.b_46_1096

seq1  GAATTCCCAGAACAAGTCCAAATTCTGTGTTCCAATATGGAAGCAGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGAACAAGTCCAAATTCTGTGTTCCAATATGGAAGCAGTTTC  50

seq1  ATAAAGAGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTCTGTCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTCTGTCTGTC  100

seq1  TGTCTGTCTGTCTGTCTGTCTGTTTGTTTGTTTGTTTAGAGACAGGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTGTCTGTCTGTCTGTTTGTTTGTTTGTTTAGAGACAGGGTTT  150

seq1  TACTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTATAGACCAGGCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTATAGACCAGGCTGGC  200

seq1  CTCGAACTCGGAAACCTGCCTGCCTCTGCCTCCCAAGTGCTGGAATTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAACTCGGAAACCTGCCTGCCTCTGCCTCCCAAGTGCTGGAATTAAA  250

seq1  GGCGTGTGCCACCACTGCCCGGCTCATAAGGAATTTAAAGAACAGGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGTGCCACCACTGCCCGGCTCATAAGGAATTTAAAGAACAGGAAAA  300

seq1  CAACAAAAAGTCATAAAGGAAGACAGTACAAATGCACAGGTGGAAACGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAAAGTCATAAAGGAAGACAGTACAAATGCACAGGTGGAAACGTG  350

seq1  ATTGCGGCTGCAGAAAGACCTTAGCTATAGGCTTCAGATGCTACCTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCGGCTGCAGAAAGACCTTAGCTATAGGCTTCAGATGCTACCTGATG  400

seq1  GCATTCATAGCTTTCAGACGGAAACTTATAGTTGGCTAAGCTAATATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCATAGCTTTCAGACGGAAACTTATAGTTGGCTAAGCTAATATATT  450

seq1  CCAAAAGATTTTTAGCTGCTAATCACAAGATATTAGACCTGACACGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGATTTTTAGCTGCTAATCACAAGATATTAGACCTGACACGGAAG  500

seq1  GTGTCAAGGAAGGGCTATTTAAGGAATTAAAGGTGGTCTGAAACAAATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAAGGAAGGGCTATTTAAGGAATTAAAGGTGGTCTGAAACAAATTG  550

seq1  TCCTTAGGCTCTAGATCTGCAACATTCCAACTTCTCTTTATCATTAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGGCTCTAGATCTGCAACATTCCAACTTCTCTTTATCATTAAGAC  600

seq1  TTGAATCAATCAGCCTTGGCAGACACAGTTTCTTGTCAGGAATTCTCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCAATCAGCCTTGGCAGACACAGTTTCTTGTCAGGAATTCTCCTT  650

seq1  CACACCTGTAAGGGAATGAGCTATGCAAGCAGAAGGCCCAGGAGACTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTGTAAGGGAATGAGCTATGCAAGCAGAAGGCCCAGGAGACTGTA  700

seq1  GCTTGAACACTGGCTGGGCAAGTTACAGAAACTTTATGAATCTTAGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||    
seq2  GCTTGAACACTGGCTGGGCAAGTTACAGAAACTTTATGAATCTTAG----  746

seq1  TTTTTTTTTTTTTTTATCTATACAGTG-AGGCTGGGATTTGTTCTCATAT  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTATCTATACAGTGAAGGCTGGGATTTGTTCTCATAT  796

seq1  CATGGTA-TTTCATCTTTGGAGTAAAAACACA-TTAAAATA--TTTTTAT  845
      ||||||| |||||||||||||||||||||||| ||||||||  |||||||
seq2  CATGGTATTTTCATCTTTGGAGTAAAAACACATTTAAAATATTTTTTTAT  846

seq1  AACATGCAGCAGGTTCAA-TTTCCCCTAAATTAAAAAATATTAAAGGTGA  894
      |||||||||||||||||| ||||| || || | |||||||||||||||||
seq2  AACATGCAGCAGGTTCAATTTTCCTCTTAAATTAAAAATATTAAAGGTGA  896

seq1  TTAAATGTAGCAATGCATGTAAGGAGTTTTGAAGTGATAAAGTACTAAGT  944
      |||||||||||||||||||||||||||||||||||||| ||||||| |||
seq2  TTAAATGTAGCAATGCATGTAAGGAGTTTTGAAGTGAT-AAGTACT-AGT  944

seq1  GAGGCTGAGGTATCATTATTTTAATTATGCAATTATGCCGAAGCAGAATT  994
      |||||||| |||||||||||||| ||||   |||||| |||||||| |||
seq2  GAGGCTGA-GTATCATTATTTTATTTATTGCATTATGTCGAAGCAG-ATT  992

seq1  ACCTGGTGTTTCTATTAGCTCCTATGCTGACACTCAAATTTGAATTCCCA  1044
      ||   ||||||||||||||| |||||||||| |||||| ||||| |||||
seq2  AC--TGTGTTTCTATTAGCTTCTATGCTGACCCTCAAA-TTGAAGTCCCA  1039

seq1  GGACAA-GTCCC  1055
      |||||| |||||
seq2  GGACAAGGTCCC  1051

seq1: chr6_106660348_106660404
seq2: B6Ng01-095B23.g_743_813

seq1  CCTTTTCTTTTTTTT--AAGGCATTTTTTATTAGATATTTTCTTCAT---  45
      |||||||||||||||  ||   |||||||||||||||||||||||||   
seq2  CCTTTTCTTTTTTTTAAAAACAATTTTTTATTAGATATTTTCTTCATTCT  50

seq1  ---------TTACATTTCTGA  57
               || |||||||||
seq2  ATGTCTCCCTTTCATTTCTGA  71