BAC Information

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BAC

Clone NameB6Ng01-095D12
Chromosome1 (Build37)
Map Location 122,526,910 - 122,687,786
singlet/doubletdoublet
Overlap genenone
Upstream geneEpb4.1l5, Ptpn4, LOC100042447, LOC666870, LOC100041863, Tmem177, Gm101, Sctr, Tmem37, Dbi, 3110009E18Rik, Steap3, C1ql2, Marco, En1
Downstream geneAI848258, Insig2, Ccdc93, LOC100041926, Htr5b, LOC666656, Ddx18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095D12.bB6Ng01-095D12.g
ACCDH906220DH906221
length9881,128
definitionDH906220|Mus musculus domesticus DNA, BAC clone: B6Ng01-095D12, 5' end.DH906221|Mus musculus domesticus DNA, BAC clone: B6Ng01-095D12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,686,803 - 122,687,786)(122,526,910 - 122,528,040)
sequence
gaattccttgctacctaataactgcattggctgtggccaccaccctgagc
tagggacatggctcctgtttgaacctgtttcctccctagcaacaaacagt
gtccaaaggttccacagtagaaattgcaggaatctgcgaactacaatcat
atagacagaaaatgttagctctctcctacatcgtgtgtgtgcactgggga
agtgaggtgtatgtgcatgtatgtacatgtgtgtggaggccagaagacag
catcaggtgtcctggtctattactctctgctttagtccttgagatagggg
ctctcactgaaacttaatgaagctggaagtctatctctccacccattaca
gccctgagtttacagacacttacaaaccaatgcttgttttttatgtgaga
actacagattcaaactcaggtcctcacccacactgtgcaacagtgctctt
acccattgcactatctcgccaggccctgacattcatggttattttacttc
ttgctttgactgtcacatcaaatcttcctctaaccaaactctgacttctg
gtccatctatcttgctctcccgacacatcttgtctggttcaacaaacatt
ccttgtcatttattttccacattgggatttatgtcttttcttgaccctct
ttagctatttgaagttgaaggttcataatattcctgtcttcctgaaagta
ctactgtgcttaaggtttcatgtatatttatttggtttgaaatgcttggc
tcagggactggcactattaggaggtgtggccttgttggagaatgtgtggt
cttgttgggggaattgtgtcactgtgggggtggggtaatgagaccctcct
tcctaacacatgggagcctttctctcctagcagctttcagatgaagaatg
taaaactctcacctcctcctctaacatgtttgggattttggcacaactcc
caccttattgtggatgataatgcactgaaattctgaac
gaattccccttttctctgtgtgaaaaaagaacccttgtatatgcagggca
agcagcctaccactgagctccaccccacccctacccttggttttcttttg
gggggaaatggtgtctcagggaagggcttggatgcacaatgctttcaaag
gaaggaagactttggagttagactagacaaagagagctattcatgtgaag
tttagaccagctgaggccaagtcgcaggtagtcactttgggaaagtgtcc
taattttacctttactgtcctaaaacaccctgaccaaaacaatttagagc
ggccaagggtttactcagctctcagttccaagttatagcccaccatgtgg
gaaagccaggacagccaggcagctgccatcccccctccgccccccctcca
ttctatgcaattctggattcctaggttagggaatggtgccacccacaggg
gactgtatcttcatcagttaataatcaagacacctgccactggcatgccc
acagggcaacctcatctaaataatttcccccctgtaactctcttttcaga
tagttctagactgtagtaagttgacattttaaacggatcatcaaagaagg
gtaggtacatctcctgggacaagttctggcagctctaaccaccaggctca
tgaaaacaggatattattttttgtcacagatcattacatcgggatctggg
gactagagacaagtcctacctccagctttgtgacctttgagttgaactct
tgccatctctgtgtgggactctattaaaggaaaggccaaccaatcaggtt
gactagtagggttgactggacaattcccttagtggtagttggagtcttgg
ttctgagggaggaagatcacgtgacgagcttttagcttctgttctccctc
accaaagacaccctggccagttacaggtggttcccttgtcttgagtggag
atgcaacagacataccataaagcttagaagggctgggctgctattcccat
gcatctttgattatacaatgggaaatgtattattatttggcatgaatatt
ttaaggcaaagcgttacgataccagcatattgtggtcttcagtaattgga
gtcttatttgcacggaacttatgatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_122686803_122687786
seq2: B6Ng01-095D12.b_48_1035 (reverse)

seq1  GTTCAGAAATTCAGTGCATTATCATCAACATAAAGGTGGGAG-TGTGGCA  49
      |||||||| ||||||||||||||||| |||  |||||||||| |||| ||
seq2  GTTCAGAATTTCAGTGCATTATCATCCACAATAAGGTGGGAGTTGTGCCA  50

seq1  AAAT-CCAAACATGGTAGAGGAGGAGGTGAGAGTTTTACA-TCTTCATCT  97
      |||| ||||||||| ||||||||||||||||||||||||| |||||||||
seq2  AAATCCCAAACATGTTAGAGGAGGAGGTGAGAGTTTTACATTCTTCATCT  100

seq1  GAAGGCTGCTAGGAGAAGATGGCTGCCATGTGGTTAGG-AGGAGGGTCTC  146
      ||| ||||||||||||  | |||| |||||| |||||| |||||||||||
seq2  GAAAGCTGCTAGGAGAGAAAGGCTCCCATGT-GTTAGGAAGGAGGGTCTC  149

seq1  ATTA-CCCACCCCCACAGTGACACAATTCCCCCAACAAGACCACACATTC  195
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCCCACCCCCACAGTGACACAATTCCCCCAACAAGACCACACATTC  199

seq1  TCCAACAAGGCCACACCTCCTAATAGTGCCAGTCCCTGAGCCAAGCATTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAAGGCCACACCTCCTAATAGTGCCAGTCCCTGAGCCAAGCATTT  249

seq1  CAAACCAAATAAATATACATGAAACCTTAAGCACAGTAGTACTTTCAGGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCAAATAAATATACATGAAACCTTAAGCACAGTAGTACTTTCAGGA  299

seq1  AGACAGGAATATTATGAACCTTCAACTTCAAATAGCTAAAGAGGGTCAAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGAATATTATGAACCTTCAACTTCAAATAGCTAAAGAGGGTCAAG  349

seq1  AAAAGACATAAATCCCAATGTGGAAAATAAATGACAAGGAATGTTTGTTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACATAAATCCCAATGTGGAAAATAAATGACAAGGAATGTTTGTTG  399

seq1  AACCAGACAAGATGTGTCGGGAGAGCAAGATAGATGGACCAGAAGTCAGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGACAAGATGTGTCGGGAGAGCAAGATAGATGGACCAGAAGTCAGA  449

seq1  GTTTGGTTAGAGGAAGATTTGATGTGACAGTCAAAGCAAGAAGTAAAATA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTAGAGGAAGATTTGATGTGACAGTCAAAGCAAGAAGTAAAATA  499

seq1  ACCATGAATGTCAGGGCCTGGCGAGATAGTGCAATGGGTAAGAGCACTGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGAATGTCAGGGCCTGGCGAGATAGTGCAATGGGTAAGAGCACTGT  549

seq1  TGCACAGTGTGGGTGAGGACCTGAGTTTGAATCTGTAGTTCTCACATAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGTGTGGGTGAGGACCTGAGTTTGAATCTGTAGTTCTCACATAAA  599

seq1  AAACAAGCATTGGTTTGTAAGTGTCTGTAAACTCAGGGCTGTAATGGGTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGCATTGGTTTGTAAGTGTCTGTAAACTCAGGGCTGTAATGGGTG  649

seq1  GAGAGATAGACTTCCAGCTTCATTAAGTTTCAGTGAGAGCCCCTATCTCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATAGACTTCCAGCTTCATTAAGTTTCAGTGAGAGCCCCTATCTCA  699

seq1  AGGACTAAAGCAGAGAGTAATAGACCAGGACACCTGATGCTGTCTTCTGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTAAAGCAGAGAGTAATAGACCAGGACACCTGATGCTGTCTTCTGG  749

seq1  CCTCCACACACATGTACATACATGCACATACACCTCACTTCCCCAGTGCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACACACATGTACATACATGCACATACACCTCACTTCCCCAGTGCA  799

seq1  CACACACGATGTAGGAGAGAGCTAACATTTTCTGTCTATATGATTGTAGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACGATGTAGGAGAGAGCTAACATTTTCTGTCTATATGATTGTAGT  849

seq1  TCGCAGATTCCTGCAATTTCTACTGTGGAACCTTTGGACACTGTTTGTTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGATTCCTGCAATTTCTACTGTGGAACCTTTGGACACTGTTTGTTG  899

seq1  CTAGGGAGGAAACAGGTTCAAACAGGAGCCATGTCCCTAGCTCAGGGTGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGAGGAAACAGGTTCAAACAGGAGCCATGTCCCTAGCTCAGGGTGG  949

seq1  TGGCCACAGCCAATGCAGTTATTAGGTAGCAAGGAATTC  984
      |||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACAGCCAATGCAGTTATTAGGTAGCAAGGAATTC  988

seq1: chr1_122526910_122528040
seq2: B6Ng01-095D12.g_70_1197

seq1  GAATTCCCCTTTTCTCTGTGTGAAAAAAGAACCCTTGTATATGCAGGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTTTTCTCTGTGTGAAAAAAGAACCCTTGTATATGCAGGGCA  50

seq1  AGCAGCCTACCACTGAGCTCCACCCCACCCCTACCCTTGGTTTTCTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTACCACTGAGCTCCACCCCACCCCTACCCTTGGTTTTCTTTTG  100

seq1  GGGGGAAATGGTGTCTCAGGGAAGGGCTTGGATGCACAATGCTTTCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAATGGTGTCTCAGGGAAGGGCTTGGATGCACAATGCTTTCAAAG  150

seq1  GAAGGAAGACTTTGGAGTTAGACTAGACAAAGAGAGCTATTCATGTGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGACTTTGGAGTTAGACTAGACAAAGAGAGCTATTCATGTGAAG  200

seq1  TTTAGACCAGCTGAGGCCAAGTCGCAGGTAGTCACTTTGGGAAAGTGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACCAGCTGAGGCCAAGTCGCAGGTAGTCACTTTGGGAAAGTGTCC  250

seq1  TAATTTTACCTTTACTGTCCTAAAACACCCTGACCAAAACAATTTAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTACCTTTACTGTCCTAAAACACCCTGACCAAAACAATTTAGAGC  300

seq1  GGCCAAGGGTTTACTCAGCTCTCAGTTCCAAGTTATAGCCCACCATGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGGGTTTACTCAGCTCTCAGTTCCAAGTTATAGCCCACCATGTGG  350

seq1  GAAAGCCAGGACAGCCAGGCAGCTGCCATCCCCCCTCCGCCCCCCCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCAGGACAGCCAGGCAGCTGCCATCCCCCCTCCGCCCCCCCTCCA  400

seq1  TTCTATGCAATTCTGGATTCCTAGGTTAGGGAATGGTGCCACCCACAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGCAATTCTGGATTCCTAGGTTAGGGAATGGTGCCACCCACAGGG  450

seq1  GACTGTATCTTCATCAGTTAATAATCAAGACACCTGCCACTGGCATGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTATCTTCATCAGTTAATAATCAAGACACCTGCCACTGGCATGCCC  500

seq1  ACAGGGCAACCTCATCTAAATAATTTCCCCCCTGTAACTCTCTTTTCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCAACCTCATCTAAATAATTTCCCCCCTGTAACTCTCTTTTCAGA  550

seq1  TAGTTCTAGACTGTAGTAAGTTGACATTTTAAACGGATCATCAAAGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTAGACTGTAGTAAGTTGACATTTTAAACGGATCATCAAAGAAGG  600

seq1  GTAGGTACATCTCCTGGGACAAGTTCTGGCAGCTCTAACCACCAGGCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTACATCTCCTGGGACAAGTTCTGGCAGCTCTAACCACCAGGCTCA  650

seq1  TGAAAACAGGATATTA-TTTTTGTCACAGATCATTACATCGGGATCTGGG  699
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGAAAACAGGATATTATTTTTTGTCACAGATCATTACATCGGGATCTGGG  700

seq1  GACTAGAGACAAGTCCTACCTCCAGCTTTGTGACCTTTGAGTTGAACTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGAGACAAGTCCTACCTCCAGCTTTGTGACCTTTGAGTTGAACTCT  750

seq1  TGCCATCTCTGTGTGGGACTCTATTAAAGGAAAGGCCAACCAATCAGGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCTCTGTGTGGGACTCTATTAAAGGAAAGGCCAACCAATCAGGTT  800

seq1  GACTAGTAGGGTTGACTGGACAATTCCC-TAGT-GTAGTTGGAGTCCTGG  847
      |||||||||||||||||||||||||||| |||| |||||||||||| |||
seq2  GACTAGTAGGGTTGACTGGACAATTCCCTTAGTGGTAGTTGGAGTCTTGG  850

seq1  TTCTGAGGGAGGAAGATCACGTGACGAGC-TTTAGCTTCTGTTCTCACCT  896
      ||||||||||||||||||||||||||||| |||||||||||||||| |||
seq2  TTCTGAGGGAGGAAGATCACGTGACGAGCTTTTAGCTTCTGTTCTC-CCT  899

seq1  CACCAAAGACACCCTGGCCAGTTACAGGATGTTTCCTTGTCTTGAAGTGG  946
      ||||||||||||||||||||||||||||  ||| |||||||||| |||||
seq2  CACCAAAGACACCCTGGCCAGTTACAGGTGGTTCCCTTGTCTTG-AGTGG  948

seq1  AGATGCAACAGACATACCAT-AAGCTTAGAAGGGCT-GGCTGCTAATCCC  994
      |||||||||||||||||||| ||||||||||||||| |||||||| ||||
seq2  AGATGCAACAGACATACCATAAAGCTTAGAAGGGCTGGGCTGCTATTCCC  998

seq1  ATGCATCTTTGATTAATACAAATGGGAAAATGAATTTATTATTATGCAAT  1044
      |||||||||||||| |||| |||||| ||||| | |||||||| ||  ||
seq2  ATGCATCTTTGATT-ATAC-AATGGG-AAATGTA-TTATTATT-TGGCAT  1043

seq1  GAATATTTATAAGGTAAATAGCGTTTATCAGATACCAGGCATATTGTTGG  1094
      |||||||| ||||| ||  |||||   |  ||||||| |||||||| |||
seq2  GAATATTT-TAAGGCAA--AGCGT---TACGATACCA-GCATATTG-TGG  1085

seq1  TCTTCAGTAAATTGGAGTCATTATTAGCAC--------TGATATT  1131
      |||||||| |||||||||| ||||| ||||        |||||||
seq2  TCTTCAGT-AATTGGAGTC-TTATTTGCACGGAACTTATGATATT  1128