BAC Information

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BAC

Clone NameB6Ng01-095G22
Chromosome1 (Build37)13 (Build37)
Map Location 119,767,044 - 119,767,88629,329,011 - 29,329,539
singlet/doubletsingletsinglet
Overlap geneLOC636972
Upstream geneB020011L13Rik, LOC100041684
Downstream geneEG666785, EG634762, LOC100042368, LOC637083, Tsn, Mki67ip, Clasp1, Tcfcp2l1, LOC100041753, Gli2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095G22.bB6Ng01-095G22.g
ACCDH906375DH906376
length953899
definitionDH906375|Mus musculus domesticus DNA, BAC clone: B6Ng01-095G22, 5' end.DH906376|Mus musculus domesticus DNA, BAC clone: B6Ng01-095G22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(119,767,044 - 119,767,886)(29,329,011 - 29,329,539)
sequence
gaattcacattagacaactaagtgtcttcgcaaagctttagaacacaaga
tcatatgaatgaccatgcaaatcaggatcagtggaactgcatggtaggtg
gcagaaccctaagtaaaaataaatcatgatacctaaaggtcatctctgaa
catccttagacattgaaatatacaatgtttgatatagctgcatgataaga
taggtaatttatttctgctttagttatgaaagattaaaaatcctagtaag
ctacaaatccattgttattaaaattatgttactgcactaccaatttatat
taatatggtgctaagattatagtaaaatataaacattttaaaaaaattgc
tggtcttcccattgggctaccctcctcttcagcttctcacggcttttctc
aaattggaccatggggatccctagcttcactccattgagtgggtgctagt
atctgcatctgactctttgatctgcctgttgggactctcagagggcaacc
atgcttggcttctgtctgcaagtataccacagcatcagtaatagtgttag
gcccaggggcctctccttgagcttgatcccagtttgcactgtcaccggac
cttctttctctcaggctcttctccatatttgtccctgcagttccttcaca
caggaacaattttgggttagagattttgattttggcatggccatcccatc
cctccacttggtgtcctgtccctcaatgggaggtggaatctacaagttca
ctctccccactatagggcatttcattcaatgtccctacccttgagtcctg
agaatttctcacccccaaggcctctggtgcattctagagggggtcccacc
acctccaacctcccagagttgcctgttcccattcgttcttctggccctca
aggattcagtcctgttcctgcccaagtacctgatcatgtttcccccttcg
ctt
gaattctttcctagggtttctatctccagcgttgccttattttgggtttt
ctttattgtgtctacttccgtttttaggtctagtatggttttgttcattt
ctatcacctgtttggatgtgttttcctgtttttctataacaacttctacc
tgtttggttgtgttttcctgtttttctttaaggacttgtaactctttagc
agtgttctcctgtatttctttaagtgagttattaaagtccttctttatgt
cctctaccatcatcatgagaaatgcttttaaatccaggtctaccatttca
ggtgtgttaggatgccctggactggccaagtgggaatgctgggttctgat
gatggtgagtggtcttggttcctgttagtaggaatctcatgtttaccttt
cgccatctggcaatctctggagttagttgttatagttgtctttgtttaga
gattgttcctctgttgattttgttaccctctatcagcagacgtgggagac
tagctctctcctctgagtttcagtggtcagagcagtctctgcaggcaagc
tctcctctttcagggaaggtgcacagttatgtggtgtttggacctcctcc
tggctgaagatgaaggctcaaaacaggatctttcccagaagctgtgttgc
ttttggccaggaaggtggtcggttgtctgtagccgaagatggcgccgccc
cagaagctctctggctctcgcctgtcccagaaacggctggcctctgtttt
ccacaccttcacgcatgcagcctgccctctgcggggtcccggagccaagg
aggctcccgccggggcctgaggcacaacctctcgggccgggtggaccact
gtgctctcacaggagtggctggtgtctggagccgaagatggcgccgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_119767044_119767886
seq2: B6Ng01-095G22.b_47_889

seq1  GAATTCACATTAGACAACTAAGTGTCTTCGCAAAGCTTTAGAACACAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTAGACAACTAAGTGTCTTCGCAAAGCTTTAGAACACAAGA  50

seq1  TCATATGAATGACCATGCAAATCAGGATCAGTGGAACTGCATGGTAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATGAATGACCATGCAAATCAGGATCAGTGGAACTGCATGGTAGGTG  100

seq1  GCAGAACCCTAAGTAAAAATAAATCATGATACCTAAAGGTCATCTCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACCCTAAGTAAAAATAAATCATGATACCTAAAGGTCATCTCTGAA  150

seq1  CATCCTTAGACATTGAAATATACAATGTTTGATATAGCTGCATGATAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTAGACATTGAAATATACAATGTTTGATATAGCTGCATGATAAGA  200

seq1  TAGGTAATTTATTTCTGCTTTAGTTATGAAAGATTAAAAATCCTAGTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAATTTATTTCTGCTTTAGTTATGAAAGATTAAAAATCCTAGTAAG  250

seq1  CTACAAATCCATTGTTATTAAAATTATGTTACTGCACTACCAATTTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAATCCATTGTTATTAAAATTATGTTACTGCACTACCAATTTATAT  300

seq1  TAATATGGTGCTAAGATTATAGTAAAATATAAACATTTTAAAAAAATTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGGTGCTAAGATTATAGTAAAATATAAACATTTTAAAAAAATTGC  350

seq1  TGGTCTTCCCATTGGGCTACCCTCCTCTTCAGCTTCTCACGGCTTTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTCCCATTGGGCTACCCTCCTCTTCAGCTTCTCACGGCTTTTCTC  400

seq1  AAATTGGACCATGGGGATCCCTAGCTTCACTCCATTGAGTGGGTGCTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGACCATGGGGATCCCTAGCTTCACTCCATTGAGTGGGTGCTAGT  450

seq1  ATCTGCATCTGACTCTTTGATCTGCCTGTTGGGACTCTCAGAGGGCAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCATCTGACTCTTTGATCTGCCTGTTGGGACTCTCAGAGGGCAACC  500

seq1  ATGCTTGGCTTCTGTCTGCAAGTATACCACAGCATCAGTAATAGTGTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGGCTTCTGTCTGCAAGTATACCACAGCATCAGTAATAGTGTTAG  550

seq1  GCCCAGGGGCCTCTCCTTGAGCTTGATCCCAGTTTGCACTGTCACCGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGGGCCTCTCCTTGAGCTTGATCCCAGTTTGCACTGTCACCGGAC  600

seq1  CTTCTTTCTCTCAGGCTCTTCTCCATATTTGTCCCTGCAGTTCCTTCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTCTCTCAGGCTCTTCTCCATATTTGTCCCTGCAGTTCCTTCACA  650

seq1  CAGGAACAATTTTGGGTTAGAGATTTTGATTTTGGCATGGCCATCCCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACAATTTTGGGTTAGAGATTTTGATTTTGGCATGGCCATCCCATC  700

seq1  CCTCCACTTGGTGTCCTGTCCCTCAATGGGAGGTGGAATCTACAAGTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACTTGGTGTCCTGTCCCTCAATGGGAGGTGGAATCTACAAGTTCA  750

seq1  CTCTCCCCACTATAGGGCATTTCATTCAATGTCCCTACCCTTGAGTCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCACTATAGGGCATTTCATTCAATGTCCCTACCCTTGAGTCCTG  800

seq1  AGAATTTCTCACCCCCAAGGCCTCTGGTGCATTCTAGAGGGGG  843
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCTCACCCCCAAGGCCTCTGGTGCATTCTAGAGGGGG  843

seq1: chr13_29329011_29329539
seq2: B6Ng01-095G22.g_70_597 (reverse)

seq1  TCTGACCACTGAAACTCAGAGGAGAGAGCTAGCCTCCCACGTCTGCTGAT  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCTGACCACTGAAACTCAGAGGAGAGAGCTAGTCTCCCACGTCTGCTGAT  50

seq1  AGAGGGTAACAAAAGCAACAGAGGAACAATCTCTAAACAAAGACAACTAT  100
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGAGGGTAACAAAATCAACAGAGGAACAATCTCTAAACAAAGACAACTAT  100

seq1  AACAACTAACTCCAGAGATTGCCAGATGGCGAAAGGTAAACGTAAGAATC  150
      ||||||||||||||||||||||||||||||||||||||||| | ||| ||
seq2  AACAACTAACTCCAGAGATTGCCAGATGGCGAAAGGTAAACATGAGATTC  150

seq1  CTACTAACAGGAACCAAGACCACTCACCATCATCAGAACCCAGCACTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTACTAACAGGAACCAAGACCACTCACCATCATCAGAACCCAGCATTCCC  200

seq1  ACTTCGCCCAGTCCAGGACATCCTAACACACCTGAAAAGGTAGACCTGGA  250
      |||| | |||||||||| ||||||||||||||||||| ||||||||||||
seq2  ACTT-GGCCAGTCCAGGGCATCCTAACACACCTGAAATGGTAGACCTGGA  249

seq1  TTTAAAAGCATTTCTCATGATGATGGTAGAGGACATAAAGAAGGAATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTAAAAGCATTTCTCATGATGATGGTAGAGGACATAAAGAAGGACTTTA  299

seq1  ATAACTCACTTAAGGAAATACAGGAGAACACTGCTAAAGAGTTACAAGTC  350
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATAACTCACTTAAAGAAATACAGGAGAACACTGCTAAAGAGTTACAAGTC  349

seq1  CTTAAAGAAAAACAGGAAAACACAACCAAACAGGTAGAAGTCCTTATAGA  400
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  CTTAAAGAAAAACAGGAAAACACAACCAAACAGGTAGAAGTTGTTATAGA  399

seq1  AAAACAGGAAAACACATCGAAACAGGTGATAGAAATGAACAAAACCATAC  450
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAAACAGGAAAACACATCCAAACAGGTGATAGAAATGAACAAAACCATAC  449

seq1  TAGACCTAAAAAGGGAAGTAGACACAATAAAGAAAACCCAAAGTGAGGCA  500
      |||||||||||| ||||||||||||||||||||||||||||| | |||||
seq2  TAGACCTAAAAACGGAAGTAGACACAATAAAGAAAACCCAAAATAAGGCA  499

seq1  ACGCTGGAGATAGAAACCCTAGGAAAGAA  529
      |||||||||||||||||||||||||||||
seq2  ACGCTGGAGATAGAAACCCTAGGAAAGAA  528