BAC Information

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BAC

Clone NameB6Ng01-095J03
Chromosome1 (Build37)
Map Location 27,230,796 - 27,231,967
singlet/doubletsinglet
Overlap genenone
Upstream gene4931408C20Rik
Downstream geneLOC677427, LOC100040952, EG433281
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095J03.bB6Ng01-095J03.g
ACCDH906477DH906478
length1,147857
definitionDH906477|Mus musculus domesticus DNA, BAC clone: B6Ng01-095J03, 5' end.DH906478|Mus musculus domesticus DNA, BAC clone: B6Ng01-095J03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagtatatatttcagttagtggtatttctttttaattctttca
attctgagaaatcaaaaatatggggacaggatagctctgtcatatcattt
tacttcaattacttcaataaccaatacccttggacttatttcttttaatc
tacaaatatataattaatatgataaagaaaattcattaatcacattgcat
tgctttaacactaatgtttctgtatgtgtcatttgtacaatgtcactgtt
ttctccttaatttcaatttcaacatgttcttatattacctttagttttct
taaaggacatgaataacttggacttgtagtttattttatatttaccaatt
ctattaaactcaagacctcagtatgtttcacaatgttaccagcaattctt
agactcaaataatcttttaaatgtccatccaatcattcaaaagaaaatta
tacatatataattttgccactatgaattttaattttattttatgtgttat
tttaatatataatatattataatatgctatctcatgtttatatattttga
ataaattatctaaaatataaacaacatattctttcatcaaagtttatgaa
attggctatcaaaaaactctgcctaagtataaaattatttattcaactac
aagtaatttccaaaactagtagcaatcactcagatgtcccttcccaagac
ctaggtagatgtaccttctctctggatgtatttgcttacgcatagtatat
tatgtataaggaattatattatctgtaaaatactgtttgctctatttact
cagaagtaacattcacaagatcagtacaagctgtaatagactttaatact
tatttatatgcttaaaaatactcattttcagatgttatatgtcctgtttt
tctgttactagtttatgaaaattaaaattttaccttcatgtagtatgcat
ttgattttgctaaagagtatataaattgtatagatatattttatgtattt
tatctcacactagaatatatactagaccatgtactaccattacttttgaa
acagttatttgttacgtaggacttgcaactttctgaatgtatgagggttc
tcttacattgtcgacacttgaaaacctgtagctcagttattgatgct

gaattctttcagtgataaatagcaatgtggaaatgtaagctgaataaacc
ctttccttcccaactgcttcttggtcatgatgtttgtgcaggaatcgaaa
ccttgattatgacactacctgtctaggtgtctgccaataaatgaagggat
aaagaaatgtggtacatttgcatgatgaaatatcacctttcaagaaattc
acagaaaactgaaatgagctggtatatatcatcctgactgagatagcaca
gaccccaaaagaaagatatcatgtattaacttacatggaaatgataactg
taaatactttaataaatagtctacaatccatataaatccatataagcaca
gaggttaaatataaagtaaggaactgggggggggatagcataatttaggg
aggggaaatagaatgaataattttattaatggtttaatgaggaaacggaa
acagaaggaacgaatggggaaggtgaaggaagatggcacttatgaaggga
atactgggacagaagcctaaaataaagtgcattttttatgggttacataa
aaacataggaataaagcttcttaaaaatatatacacaaatgaaaggtatt
tatatggagtcaccaactaacagaggaagtacatctcccaaaggatgtct
cctgtgacaaaatgaagcttctagtactagaattgggttacatctaatgg
agtctttggccctttggaaacccatcaacagtccaggctcttgccaaagc
tatggtggctctccacaactgatggtagggcctactgctgaagacaactc
ttaccaaacacattgctcaagggaattagctggtgttcagctaaatctca
actcggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_27230796_27231967
seq2: B6Ng01-095J03.b_46_1192 (reverse)

seq1  AGCATCAATAACTGAGCTTAACCAAGTTTTTCAAAGTTGTCGACAATGT-  49
      ||||||||||||||||||  ||  || |||||||   |||||||||||| 
seq2  AGCATCAATAACTGAGCT--AC--AGGTTTTCAA--GTGTCGACAATGTA  44

seq1  AGAGAACCCTCATACATTTCAGGAAAGTTTGCAAAGTCCTACGTAAACAA  99
      |||||||||||||||| |||| ||||| |||| ||||||||||| |||||
seq2  AGAGAACCCTCATACA-TTCA-GAAAG-TTGC-AAGTCCTACGT-AACAA  89

seq1  ATTAACTGTTTTCAAAAAGTTAATGGTAGTTACAATTGGTCTAGTAATTA  149
      | |||||| ||||||||   ||||||||| ||||  ||||||||||  ||
seq2  A-TAACTG-TTTCAAAA--GTAATGGTAG-TACA--TGGTCTAGTA--TA  130

seq1  TATTTCTAGGTGTGGAGATAAAATACATAAAATTATATCCTTATACAATT  199
      || ||||| |||| |||||||||||||||||| ||||||  |||||||||
seq2  TA-TTCTA-GTGT-GAGATAAAATACATAAAA-TATATC--TATACAATT  174

seq1  TATATACTCTTTAGCAAAATCAAATGCATACTACATGAAGGTAAAATTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACTCTTTAGCAAAATCAAATGCATACTACATGAAGGTAAAATTTT  224

seq1  AATTTTCATAAACTAGTAACAGAAAAACAGGACATATAACATCTGAAAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCATAAACTAGTAACAGAAAAACAGGACATATAACATCTGAAAAT  274

seq1  GAGTATTTTTAAGCATATAAATAAGTATTAAAGTCTATTACAGCTTGTAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTTTTAAGCATATAAATAAGTATTAAAGTCTATTACAGCTTGTAC  324

seq1  TGATCTTGTGAATGTTACTTCTGAGTAAATAGAGCAAACAGTATTTTACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTGTGAATGTTACTTCTGAGTAAATAGAGCAAACAGTATTTTACA  374

seq1  GATAATATAATTCCTTATACATAATATACTATGCGTAAGCAAATACATCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATATAATTCCTTATACATAATATACTATGCGTAAGCAAATACATCC  424

seq1  AGAGAGAAGGTACATCTACCTAGGTCTTGGGAAGGGACATCTGAGTGATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAGGTACATCTACCTAGGTCTTGGGAAGGGACATCTGAGTGATT  474

seq1  GCTACTAGTTTTGGAAATTACTTGTAGTTGAATAAATAATTTTATACTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTAGTTTTGGAAATTACTTGTAGTTGAATAAATAATTTTATACTTA  524

seq1  GGCAGAGTTTTTTGATAGCCAATTTCATAAACTTTGATGAAAGAATATGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGTTTTTTGATAGCCAATTTCATAAACTTTGATGAAAGAATATGT  574

seq1  TGTTTATATTTTAGATAATTTATTCAAAATATATAAACATGAGATAGCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATATTTTAGATAATTTATTCAAAATATATAAACATGAGATAGCAT  624

seq1  ATTATAATATATTATATATTAAAATAACACATAAAATAAAATTAAAATTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATATATTATATATTAAAATAACACATAAAATAAAATTAAAATTC  674

seq1  ATAGTGGCAAAATTATATATGTATAATTTTCTTTTGAATGATTGGATGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGCAAAATTATATATGTATAATTTTCTTTTGAATGATTGGATGGA  724

seq1  CATTTAAAAGATTATTTGAGTCTAAGAATTGCTGGTAACATTGTGAAACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAAGATTATTTGAGTCTAAGAATTGCTGGTAACATTGTGAAACA  774

seq1  TACTGAGGTCTTGAGTTTAATAGAATTGGTAAATATAAAATAAACTACAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGGTCTTGAGTTTAATAGAATTGGTAAATATAAAATAAACTACAA  824

seq1  GTCCAAGTTATTCATGTCCTTTAAGAAAACTAAAGGTAATATAAGAACAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGTTATTCATGTCCTTTAAGAAAACTAAAGGTAATATAAGAACAT  874

seq1  GTTGAAATTGAAATTAAGGAGAAAACAGTGACATTGTACAAATGACACAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAATTGAAATTAAGGAGAAAACAGTGACATTGTACAAATGACACAT  924

seq1  ACAGAAACATTAGTGTTAAAGCAATGCAATGTGATTAATGAATTTTCTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACATTAGTGTTAAAGCAATGCAATGTGATTAATGAATTTTCTTT  974

seq1  ATCATATTAATTATATATTTGTAGATTAAAAGAAATAAGTCCAAGGGTAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATTAATTATATATTTGTAGATTAAAAGAAATAAGTCCAAGGGTAT  1024

seq1  TGGTTATTGAAGTAATTGAAGTAAAATGATATGACAGAGCTATCCTGTCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTATTGAAGTAATTGAAGTAAAATGATATGACAGAGCTATCCTGTCC  1074

seq1  CCATATTTTTGATTTCTCAGAATTGAAAGAATTAAAAAGAAATACCACTA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTTTTGATTTCTCAGAATTGAAAGAATTAAAAAGAAATACCACTA  1124

seq1  ACTGAAATATATACTGAGAATTC  1172
      |||||||||||||||||||||||
seq2  ACTGAAATATATACTGAGAATTC  1147


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