BAC Information

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BAC

Clone NameB6Ng01-095M10
Chromosome1 (Build37)
Map Location 155,002,076 - 155,109,621
singlet/doubletdoublet
Overlap geneLamc2, Lamc1
Upstream gene5730449L18Rik, Glt25d2, Rgl1, EG639787, Apobec4, Arpc5, Ncf2, Smg7, EG668097, Nmnat2
Downstream geneEG667795, EG626058, 1700012A16Rik, Dhx9, Npl, LOC626096, Rgs8, Rgs16, Rnasel, LOC100043347, Rgsl1, 5830403L16Rik, EG433365, Teddm1, LOC100043357, Glul, LOC100043359
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095M10.bB6Ng01-095M10.g
ACCDH906624DH906625
length1,0771,028
definitionDH906624|Mus musculus domesticus DNA, BAC clone: B6Ng01-095M10, 5' end.DH906625|Mus musculus domesticus DNA, BAC clone: B6Ng01-095M10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,002,076 - 155,003,167)(155,108,580 - 155,109,621)
sequence
gaattcacctgtgtatggtgaaccgttcactggtttgtaatcagttcttg
gaaatcatatgaccattatcacaaagaacagatcttagccattttcaatg
ctcctaaaagagccaagccacaacctctctcagctcccacccccagccag
atgtggacattgatgtactttctgtctcattagatttgactactctggat
atttcttatcattgaaatcatatcacatgaggccatttgtgactgactta
tttcacataccataagttttcaaggtctgcccatgtcatatcacggagta
tatatcatcctgatggctgaatataatcccaccatatggatttaccataa
tttgcttatctattcattagctggtagacatttggtgtgttcccagttct
tagcaatgatgggtaatgtttgcatgaacttcagcacactaggttttgtg
cattttatccatttttatctatcgtacatgtatgtctaggagtggaattt
ctgattttgctgtcttttgtttgccttggtggtgagactcttcctggagg
caccggagcagtcatctgatcccgacaccgcctccctgtctcagggctcc
ctctggtttccatcactctttttggcacacactcacgtatctacctcatc
agtctaaaacggaagctgctagctctcccctggtaatgaaactctgctca
aagaccttatagtggagaaagagtggatgatgttcccctgtggctgtctt
ctgaccccgttaaatcctgcccaaacctgaagcttgttggactccttctc
cttcacagtccccatccggttaatgctagatctaaccaggctcacatcct
gaatccctttccaatcttggtcttcccactcctccacagtgtatccaaat
caaccagcaaatgcattctcaggctaagaaccagggactcgacagaaata
gaacatccctgattcttggggttcagtggggacagcacagcagtgatgta
tatgcagcatgctgacacccccatggtgctctttccttcctcgacttcag
cactgaccagcatgaacaagacaaagt
gaattcagtgacatttcccccctcaccggtggcaacgtggccttttcaac
cctggaaggacggccgagtgcctacaactttgacaacagccctgtgctcc
aggtaggcacccacagggtggtgtgggagccagctgctctacccaagtga
gccatccgtgggtggctaggttttaatgccattctcctgtgtgttatcta
taagtgaaaaaaaaaaagccattttcttccctctgccttgggaacatgtg
ttcttatgttcttttactcttaaaaaatatatcccagggtgtaacctttc
taaaacacatgttagtttaaggaggtattttgagacaaagtctgcccatg
tatgtagttgaggatagccttgaactcctgaccctctagcctccacctcc
ccagtgttgagattatgggtgtacacccccacactctgcttctttgaaaa
tcttattaaaactgaacagttttcattttcgtctgtgctcgtgaggaggg
aacatatcgcttctgacttttccaagaaaatatttggtgtggggctaggg
atgtatatcccgcttggtagactgctcagttaccagtgcctctaggtagc
tggttcaaggccaacctgaaatacatgagatcctgtctcaaaaagattct
aattcttttacattttgaagtttattttgtgtctatgtgtgtgtaagcac
aatagcatgtgtgtaggttaggcggccagtgcatgggagttggctctcac
ctggtgggtcctagaggatctgagggcatagacttgacgggaggtgcctc
tgcctgccgaaccttcttcactgtctgcccattctccgagtaaataaaat
aaggcatttggaaataacctcttatttttctgcatcctttcataactgtc
ccttgatttgattttatttgaaaatagccgggcgtggtggccacacgcct
ttaatcccagcactcggagcagagtagagatttctgagtcagcagctggt
ctacaagtgagttcagacagcaggctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_155002076_155003167
seq2: B6Ng01-095M10.b_53_1124

seq1  CACCTGTGTATGGTGAACCGTTCACTGGTTTGTAATCAGTTCTTGGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGTGTATGGTGAACCGTTCACTGGTTTGTAATCAGTTCTTGGAAAT  50

seq1  CATATGACCATTATCACAAAGAACAGATCTTAGCCATTTTCAATGCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGACCATTATCACAAAGAACAGATCTTAGCCATTTTCAATGCTCCT  100

seq1  AAAAGAGCCAAGCCACAACCTCTCTCAGCTCCCACCCCCAGCCAGATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGCCAAGCCACAACCTCTCTCAGCTCCCACCCCCAGCCAGATGTG  150

seq1  GACATTGATGTACTTTCTGTCTCATTAGATTTGACTACTCTGGATATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTGATGTACTTTCTGTCTCATTAGATTTGACTACTCTGGATATTTC  200

seq1  TTATCATTGAAATCATATCACATGAGGCCATTTGTGACTGACTTATTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATTGAAATCATATCACATGAGGCCATTTGTGACTGACTTATTTCA  250

seq1  CATACCATAAGTTTTCAAGGTCTGCCCATGTCATATCACGGAGTATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCATAAGTTTTCAAGGTCTGCCCATGTCATATCACGGAGTATATAT  300

seq1  CATCCTGATGGCTGAATATAATCCCACCATATGGATTTACCATAATTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGATGGCTGAATATAATCCCACCATATGGATTTACCATAATTTGC  350

seq1  TTATCTATTCATTAGCTGGTAGACATTTGGTGTGTTCCCAGTTCTTAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTATTCATTAGCTGGTAGACATTTGGTGTGTTCCCAGTTCTTAGCA  400

seq1  ATGATGGGTAATGTTTGCATGAACTTCAGCACACTAGGTTTTGTGCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGGTAATGTTTGCATGAACTTCAGCACACTAGGTTTTGTGCATTT  450

seq1  TATCCATTTTTATCTATCGTACATGTATGTCTAGGAGTGGAATTTCTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATTTTTATCTATCGTACATGTATGTCTAGGAGTGGAATTTCTGAT  500

seq1  TTTGCTGTCTTTTGTTTGCCTTGGTGGTGAGACTCTTCCTGGAGGCACCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGTCTTTTGTTTGCCTTGGTGGTGAGACTCTTCCTGGAGGCACCG  550

seq1  GAGCAGTCATCTGATCCCGACACCGCCTCCCTGTCTCAGGGCTCCCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTCATCTGATCCCGACACCGCCTCCCTGTCTCAGGGCTCCCTCTG  600

seq1  GTTTCCATCACTCTTTTTGGCACACACTCACGTATCTACCTCATCAGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATCACTCTTTTTGGCACACACTCACGTATCTACCTCATCAGTCT  650

seq1  AAAACGGAAGCTGCTAGCTCTCCCCTGGTAATGAAACTCTGCTCAAAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACGGAAGCTGCTAGCTCTCCCCTGGTAATGAAACTCTGCTCAAAGAC  700

seq1  CTTATAGTGGAGAAAGAGTGGATGATGTTCCCCTGTGGCTGTCTTCTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGTGGAGAAAGAGTGGATGATGTTCCCCTGTGGCTGTCTTCTGAC  750

seq1  CCCGTTAAATCCTGCCCAAACCTGAAGCTTGTTGGACTCCTTCTCCTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTTAAATCCTGCCCAAACCTGAAGCTTGTTGGACTCCTTCTCCTTCA  800

seq1  CAGTCCCCATCCGGTTAATGCTAGATCTAACCAGGCTCACATCCTGAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCCATCCGGTTAATGCTAGATCTAACCAGGCTCACATCCTGAATC  850

seq1  CCTTTCCAATCTTGGTCTTCCCACTCCTCCACAGTGTATCCAAATCAACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCAATCTTGGTCTTCCCACTCCTCCACAGTGTATCCAAATCAACC  900

seq1  AGCAAATGCATTCTCAGGGCTAAGAACCAGGGACTCGACAAGAAATAGGA  950
      |||||||||||||||| |||||||||||||||||||||| ||||||||  
seq2  AGCAAATGCATTCTCA-GGCTAAGAACCAGGGACTCGAC-AGAAATAG--  946

seq1  ACCATCCCTGATTCTTGGGGTTTCAAGGTGGGGAACAGCAACAGCAGTGA  1000
      | |||||||||||||||||| ||||  |||||| ||||| ||||||||||
seq2  AACATCCCTGATTCTTGGGG-TTCA--GTGGGG-ACAGC-ACAGCAGTGA  991

seq1  TGTATAATGGCAGCCATGCTGGAACACCCCCATGGTGCCTCTTTCCCTTC  1050
      ||||||   |||| |||||||  |||||||||||||| |||||| |||||
seq2  TGTATA--TGCAG-CATGCTG--ACACCCCCATGGTG-CTCTTT-CCTTC  1034

seq1  CTCGACTTCAGGCACTGAACCCAGCCATGAACAAGACAAAGT  1092
      |||||||||| |||||||  |||| |||||||||||||||||
seq2  CTCGACTTCA-GCACTGA--CCAG-CATGAACAAGACAAAGT  1072

seq1: chr1_155108580_155109621
seq2: B6Ng01-095M10.g_70_1097 (reverse)

seq1  GTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAG--GCTGGCCTTG  48
      ||||||   ||||||   |||||||| |||||||||||  ||||      
seq2  GTAGCC--TGCTGTC--TGAACTCAC-TTGTAGACCAGCTGCTG------  39

seq1  AACTCAGAAATCCTCCTACCTCTGCCTCCCGAGTGCTGGGATTAAAGGCG  98
       |||||||||||   ||| ||||||   ||||||||||||||||||||||
seq2  -ACTCAGAAATC--TCTA-CTCTGC--TCCGAGTGCTGGGATTAAAGGCG  83

seq1  TGT-GCCACCACGCCCGGCTTATTTTCAAATAAAATCAAATCAAGGAACA  147
      ||| ||||||||||||||| |||||||||||||||||||||||||| |||
seq2  TGTGGCCACCACGCCCGGC-TATTTTCAAATAAAATCAAATCAAGGGACA  132

seq1  GTTATGAAAGGATGCAAGAAAAATAAGAGGTTATTT-CAAATGCCTTATT  196
      ||||||||||||||| |||||||||||||||||||| |||||||||||||
seq2  GTTATGAAAGGATGC-AGAAAAATAAGAGGTTATTTCCAAATGCCTTATT  181

seq1  TTATTTACTCGGAGAATGGGCAGACAGTG-AGAAGGTTCGGCAGGCAGAG  245
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTATTTACTCGGAGAATGGGCAGACAGTGAAGAAGGTTCGGCAGGCAGAG  231

seq1  GCACCTCCCGTCAAGTCTATGCCCTCAGATCCTCTAGGACCCACCAGGTG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTCCCGTCAAGTCTATGCCCTCAGATCCTCTAGGACCCACCAGGTG  281

seq1  AGAGCCAACTCCCATGCACTGGCCGCCTAACCTACACACATGCTATTGTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAACTCCCATGCACTGGCCGCCTAACCTACACACATGCTATTGTG  331

seq1  CTTACACACACATAGACACAAAATAAACTTCAAAATGTAAAAGAATTAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACACACACATAGACACAAAATAAACTTCAAAATGTAAAAGAATTAGA  381

seq1  ATCTTTTTGAGACAGGATCTCATGTATTTCAGGTTGGCCTTGAACCAGCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTGAGACAGGATCTCATGTATTTCAGGTTGGCCTTGAACCAGCT  431

seq1  ACCTAGAGGCACTGGTAACTGAGCAGTCTACCAAGCGGGATATACATCCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGAGGCACTGGTAACTGAGCAGTCTACCAAGCGGGATATACATCCC  481

seq1  TAGCCCCACACCAAATATTTTCTTGGAAAAGTCAGAAGCGATATGTTCCC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCCACACCAAATATTTTCTTGGAAAAGTCAGAAGCGATATGTTCCC  531

seq1  TCCTCACGAGCACAGACGAAAATGAAAACTGTTCAGTTTTAATAAGATTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACGAGCACAGACGAAAATGAAAACTGTTCAGTTTTAATAAGATTT  581

seq1  TCAAAGAAGCAGAGTGTGGGGGTGTACACCCATAATCTCAACACTGGGGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAGCAGAGTGTGGGGGTGTACACCCATAATCTCAACACTGGGGA  631

seq1  GGTGGAGGCTAGAGGGTCAGGAGTTCAAGGCTATCCTCAACTACATACAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGGCTAGAGGGTCAGGAGTTCAAGGCTATCCTCAACTACATACAT  681

seq1  GGGCAGACTTTGTCTCAAAATACCTCCTTAAACTAACATGTGTTTTAGAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGACTTTGTCTCAAAATACCTCCTTAAACTAACATGTGTTTTAGAA  731

seq1  AGGTTACACCCTGGGATATATTTTTTAAGAGTAAAAGAACATAAGAACAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTACACCCTGGGATATATTTTTTAAGAGTAAAAGAACATAAGAACAC  781

seq1  ATGTTCCCAAGGCAGAGGGAAGAAAATGGCTTTTTTTTTTTCACTTATAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCCAAGGCAGAGGGAAGAAAATGGCTTTTTTTTTTTCACTTATAG  831

seq1  ATAACACACAGGAGAATGGCATTAAAACCTAGCCACCCACGGATGGCTCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACACAGGAGAATGGCATTAAAACCTAGCCACCCACGGATGGCTCA  881

seq1  CTTGGGTAGAGCAGCTGGCTCCCACACCACCCTGTGGGTGCCTACCTGGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTAGAGCAGCTGGCTCCCACACCACCCTGTGGGTGCCTACCTGGA  931

seq1  GCACAGGGCTGTTGTCAAAGTTGTAGGCACTCGGCCGTCCTTCCAGGGTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGGCTGTTGTCAAAGTTGTAGGCACTCGGCCGTCCTTCCAGGGTT  981

seq1  GAAAAGGCCACGTTGCCACCGGTGAGGGGGGAAATGTCACTGAATTC  1042
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGCCACGTTGCCACCGGTGAGGGGGGAAATGTCACTGAATTC  1028