BAC Information

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BAC

Clone NameB6Ng01-095N10
Chromosome1 (Build37)X (Build37)
Map Location 110,614,263 - 110,615,335136,605,180 - 136,605,387
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC435640
Downstream geneEG626474
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095N10.bB6Ng01-095N10.g
ACCDH906667DH906668
length1,065962
definitionDH906667|Mus musculus domesticus DNA, BAC clone: B6Ng01-095N10, 5' end.DH906668|Mus musculus domesticus DNA, BAC clone: B6Ng01-095N10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(110,614,263 - 110,615,335)(136,605,180 - 136,605,387)
sequence
gaattccacatcatcattaatctagtaaatggtctacagatttgcctata
ggctaatctgagggagggaacacctcagttgagctttcgttatgtcattg
cagatgaacctagtttgtgcctaatcattatcaacaacaacaacaataac
aaataaacaatacaaagcatattcatccacctgtaatgatccccaataag
tttactgattcactaagttaggcttatgtctaattacttcattgtctctt
actggtagccaatctaatttgagtagatacttacttatatctccaaggga
aaagatatataacaccatccctttataaaacaatagaatgagtcttgtca
ttaccatctgtttcatcactctccccatagtatatcactacatactttct
gtcacaaattatcacttgttttcaatatatgataaaattgtcatattcct
caaaaaaacaagcatattatcaaatcatacttgtagtaagtcttacctat
ttactttttttaggaatttggttcttataagatttcaagacaacttttcc
cagaggtttctattgttattcaaatatgtgttatgtttgttgtgttttta
tagctctacctaccttattccatgctaatacctttcaaccccaaaacatt
agataatagagaaagaatgttagagggaaaaggtggacatacagataggc
tacgtcttatagactgtaatttatgcctgaaaatcatatctggtactgtt
ctatctcccaactaattgacataaaggatttttaaagcttattaacaagc
tttaagcctagcctggcaggttctgagctattctgttctgagtccctttt
agactgttaatactaaacaaatgtcccattgcgtgccaatgtgatcttgc
actggcttactctggccaatgtatgtcctcatgtctgttctctcataaag
acattatgatctctcatgtgatctctctgcttcatggtcccaactctttc
tctctttctacactctcctgcatatcttgactggatagaaatctagttct
cccatttcatctgcc
gaattctcacctgaggaatacctaatggctgagaagcacctgataaaatg
ttctgcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccaagtcacaccagtcagaatggctaagatcaaaatttcaggtgacagc
agatgctgtagaggatgtggagaaggaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggtctgggc
atagtactactggaggatccagcaatacctctactgggcatataaccaga
agatgttccaaccagtaagaaggccacatgctccactatgttcatagaag
cattatttataatagccagaagctgggaagaacccagatccccctcaaca
gaggaatggatacagaatgtggcacatttacacaatggagtactaatcag
ctattaaaaagaatgaatttatgaaattcctaggcatatggatggacctg
gagggcatcatcctgagtgaggtaacccaatcacaaaagaattcacacaa
tatgtactcactgataagtggatattagcccagaaatttagaatacccaa
gatattagatacaatttgggaaacacatgaaagtcaagaagaatgaagac
caacgtgttggcactttgccccttcttagaattgagatcaaaacacccag
ggaaggagttagagagacaaagtttggagctgagacgaaaggatggacca
tcgagtgacttccatatctgggtatccatcccataatcggcctccaatgc
tgacaccattgtatacactagcaagatttagctgaaaggaccctgatata
gctgtctcttgtgagactatgctggggcctagcaaacacagaagtggatg
ctcaacagtcagctattggatagatcacagggcccccaatggagggagct
agataaagtacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_110614263_110615335
seq2: B6Ng01-095N10.b_47_1111 (reverse)

seq1  GGCAGATGAAATGGGGAGACTAGATTTCCTATCCCAGTC-AGATATGCCA  49
      |||||||||||||||   ||||||||| |||| |||||| ||||||||  
seq2  GGCAGATGAAATGGGAGAACTAGATTT-CTAT-CCAGTCAAGATATGC--  46

seq1  GGGAGAGGTGTTAGAAAGAGAAGAAAGGAGTTTGGGACCATGAAGCAGAG  99
       ||||| ||| ||||||||| ||||| ||| |||||||||||||||||||
seq2  AGGAGA-GTG-TAGAAAGAG-AGAAA-GAG-TTGGGACCATGAAGCAGAG  91

seq1  AGATCACATGGAGAGATCATAATGTCTTTATGAGAGAACAGACATGAGGA  149
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACAT-GAGAGATCATAATGTCTTTATGAGAGAACAGACATGAGGA  140

seq1  CATACATTGGCCAGAGTAAGCCAGTGCAAGATCACATTGGCACGCAATGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATTGGCCAGAGTAAGCCAGTGCAAGATCACATTGGCACGCAATGG  190

seq1  GACATTTGTTTAGTATTAACAGTCTTAAAGGGACTCAGAACAGAATAGCT  249
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GACATTTGTTTAGTATTAACAGTCTAAAAGGGACTCAGAACAGAATAGCT  240

seq1  CAGAACCTGCCAGGCTAGGCTTAAAGCTTGTTAATAAGCTTTAAAAATCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCTGCCAGGCTAGGCTTAAAGCTTGTTAATAAGCTTTAAAAATCC  290

seq1  -TTATGTCAATTAGTTGGGAGATAGAACAGTACCAGATATGATTTTCAGG  348
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTCAATTAGTTGGGAGATAGAACAGTACCAGATATGATTTTCAGG  340

seq1  CATAAATTACAGTCTATAAGACGTAGCCTATCTGTATGTCCACCTTTTCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATTACAGTCTATAAGACGTAGCCTATCTGTATGTCCACCTTTTCC  390

seq1  CTCTAACATTCTTTCTCTATTATCTAATGTTTTGGGGTTGAAAGGTATTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACATTCTTTCTCTATTATCTAATGTTTTGGGGTTGAAAGGTATTA  440

seq1  GCATGGAATAAGGTAGGTAGAGCTATAAAAACACAACAAACATAACACAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGAATAAGGTAGGTAGAGCTATAAAAACACAACAAACATAACACAT  490

seq1  ATTTGAATAACAATAGAAACCTCTGGGAAAAGTTGTCTTGAAATCTTATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATAACAATAGAAACCTCTGGGAAAAGTTGTCTTGAAATCTTATA  540

seq1  AGAACCAAATTCCTAAAAAAAGTAAATAGGTAAGACTTACTACAAGTATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCAAATTCCTAAAAAAAGTAAATAGGTAAGACTTACTACAAGTATG  590

seq1  ATTTGATAATATGCTTGTTTTTTTGAGGAATATGACAATTTTATCATATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATAATATGCTTGTTTTTTTGAGGAATATGACAATTTTATCATATA  640

seq1  TTGAAAACAAGTGATAATTTGTGACAGAAAGTATGTAGTGATATACTATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAACAAGTGATAATTTGTGACAGAAAGTATGTAGTGATATACTATG  690

seq1  GGGAGAGTGATGAAACAGATGGTAATGACAAGACTCATTCTATTGTTTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGTGATGAAACAGATGGTAATGACAAGACTCATTCTATTGTTTTA  740

seq1  TAAAGGGATGGTGTTATATATCTTTTCCCTTGGAGATATAAGTAAGTATC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGATGGTGTTATATATCTTTTCCCTTGGAGATATAAGTAAGTATC  790

seq1  TACTCAAATTAGATTGGCTACCAGTAAGAGACAATGAAGTAATTAGACAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAAATTAGATTGGCTACCAGTAAGAGACAATGAAGTAATTAGACAT  840

seq1  AAGCCTAACTTAGTGAATCAGTAAACTTATTGGGGATCATTACAGGTGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTAACTTAGTGAATCAGTAAACTTATTGGGGATCATTACAGGTGGA  890

seq1  TGAATATGCTTTGTATTGTTTATTTGTTATTGTTGTTGTTGTTGATAATG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATGCTTTGTATTGTTTATTTGTTATTGTTGTTGTTGTTGATAATG  940

seq1  ATTAGGCACAAACTAGGTTCATCTGCAATGACATAACGAAAGCTCAACTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGCACAAACTAGGTTCATCTGCAATGACATAACGAAAGCTCAACTG  990

seq1  AGGTGTTCCCTCCCTCAGATTAGCCTATAGGCAAATCTGTAGACCATTTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTCCCTCCCTCAGATTAGCCTATAGGCAAATCTGTAGACCATTTA  1040

seq1  CTAGATTAATGATGATGTGGAATTC  1073
      |||||||||||||||||||||||||
seq2  CTAGATTAATGATGATGTGGAATTC  1065

seq1: chrX_136605180_136605387
seq2: B6Ng01-095N10.g_761_967 (reverse)

seq1  CATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGG  50
      ||||||||||||||||||||||||||| ||||||||||||||||||||| 
seq2  CATCCACTTCTGTGTTTGCTAGGCCCCAGCATAGTCTCACAAGAGACAGC  50

seq1  TATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCA  100
      |||||| ||||||||||||| ||||||||||||||||| |||||||||||
seq2  TATATCAGGGTCCTTTCAGCTAAATCTTGCTAGTGTATACAATGGTGTCA  100

seq1  TCGCTTGGAGGCTAATTATGGGATGGATCCCTGGATATGGCAGTCTCTAG  150
       |  ||||||||  |||||||||||||| ||  ||||||| |||| || |
seq2  GC-ATTGGAGGCCGATTATGGGATGGATACCCAGATATGGAAGTCACTCG  149

seq1  ATGGACCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTC  200
      |||| ||||||||| |||||||||||||||||||||||| ||||||||||
seq2  ATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTCTAACTCCTTC  199

seq1  CATGGGTG  208
      | ||||||
seq2  CCTGGGTG  207