BAC Information

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BAC

Clone NameB6Ng01-096G20
Chromosome1 (Build37)
Map Location 15,001,944 - 15,003,143
singlet/doubletsinglet
Overlap genenone
Upstream geneEya1, LOC665391, Msc, Smt3h2-ps4, EG665407, Trpa1
Downstream geneEG269105, LOC100039949, LOC100039959, Kcnb2, Ppia-ps1_109.1, Terf1, Gm106
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096G20.bB6Ng01-096G20.g
ACCDH907079DH907080
length1,189972
definitionDH907079|Mus musculus domesticus DNA, BAC clone: B6Ng01-096G20, 5' end.DH907080|Mus musculus domesticus DNA, BAC clone: B6Ng01-096G20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgtccacgcttgagctgcacgcttacaaaaaggaactgttgt
acagtgattaacttagatcagccactgaggttgaagtaatgctagggagt
caatcagaatattcacagtagagaatttcttcctagtgtgacactggtgt
accacttggttatgtaaataacattatgatgttagtctattggaaattta
gacatatttaacatggtctaagttcctgcacatctttgggtggagacctg
taaaatgagttgtgatgctcctgtaatacttataaacctcatcctgtacc
tgagttttctgatataatgccaggatattattcaaagttaaatttgtgta
tatatacatcacactcacagaacacatgtgtttccattaattttctgatg
cctgattttggaagaaatcccaggagctaacaaagagaaattagaatcag
gtatgttgatacatacctgcaatcccaacatttggtcagggagattgact
taatagcatacaggtctacacaaagaagaccaggacagccaaggctatag
tgtgaaactatgtctcaaaaaaaatcacaaagatcagtctgacttgttca
gaggctacaagaattttggttcagcagcaagagcatctagcaccgtaaca
ttgcaacaacacatatttctttgatcagacctgtcatcaagtgtacattt
ccttccccaagctaggtataaatagaagtgagttctaatctaaaagaggg
aagataaaaatatcagagaacttggtccatgcctacttgtactgaagcag
ttactgattggtatccagaatacaacagtaacaatctaaggtggatatca
ttctagaggagacaatagaagcaaagggaggtacttacctgccaagatta
cagaagaattacatgtccctcactctgaataaaacctacaggagggaaga
ctgtagttgttggtcttcttataagtgaagagatgagaagaactttaatc
tcagttggtatgctgcttgcttcttgtgcatgaagacttgggttgacctt
ctaacatagccaaggaaaaaggaagaagaaagtaattgggtacattaaat
catgaagataggttgatgagaagtcaaaggaattcgcacggcacacgact
tttttttcattgggcctcgtggaatgatagacttcaggg

gaattcattgtttttaacagatgagtagtattgtttaaatgaaccacatt
tcctgtatccattcctctgttgagggacatctgagttctttccagcttct
ggctattataaataaggctgctatgaacatagtggagcatgtgtccttat
tacatcttggagcatcttctgggtatatgcccaggagtggtatagctggg
tcctcaggtagtactatgtccagttttctgaggagccaccatactaattt
ccagagtggttgtacaagcttgcaatcccaccagcagtggaggagtgttc
ctctttctccatatcctcaccagcatctgctgtcatctgagttttttgat
cttagccattctgactggtgtgagatgaaatctcagggttgttttgactt
gcatttccctaatgactaaggatgttgaacatttctttatgttcttcttg
gccatttgaatttcctcaattgagaattctctgtttagctctgtaccctg
tttttaatagggatttttggttttctggagtctaacttcatgagttcgtt
gtatatattggatgttagccttctattatatgtagggttctttaaaatct
tttcccaatttgttgattgttgatttgtcctattgacagtgtcctttgct
ttacagaagtttgtaattttatgaggtcccatttgtcagttcttgatctt
aaagcataagctattggttttcagttcaggaagtttttcctgtgcccatg
tgcttgaggctcctccccactctttcctttctattaatttcagtgtatct
gatttcatgtggacgtcctttgatccactttagacttgagctttgcacaa
ggagataaagaatggatcaaattgcattcttctgcacactaaccaccagt
tgatccagcaccatttgtcagtagtctgtcatttgtcaatgttatctttt
ttccactggatggtttttagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_15001944_15003143
seq2: B6Ng01-096G20.b_47_1235

seq1  GAATTCCATGTCCACGCTTGAGCTGCACGCTTACAAAAAGGAACTGTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTCCACGCTTGAGCTGCACGCTTACAAAAAGGAACTGTTGT  50

seq1  ACAGTGATTAACTTAGATCAGCCACTGAGGTTGAAGTAATGCTAGGGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGATTAACTTAGATCAGCCACTGAGGTTGAAGTAATGCTAGGGAGT  100

seq1  CAATCAGAATATTCACAGTAGAGAATTTCTTCCTAGTGTGACACTGGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGAATATTCACAGTAGAGAATTTCTTCCTAGTGTGACACTGGTGT  150

seq1  ACCACTTGGTTATGTAAATAACATTATGATGTTAGTCTATTGGAAATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTGGTTATGTAAATAACATTATGATGTTAGTCTATTGGAAATTTA  200

seq1  GACATATTTAACATGGTCTAAGTTCCTGCACATCTTTGGGTGGAGACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATTTAACATGGTCTAAGTTCCTGCACATCTTTGGGTGGAGACCTG  250

seq1  TAAAATGAGTTGTGATGCTCCTGTAATACTTATAAACCTCATCCTGTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAGTTGTGATGCTCCTGTAATACTTATAAACCTCATCCTGTACC  300

seq1  TGAGTTTTCTGATATAATGCCAGGATATTATTCAAAGTTAAATTTGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTCTGATATAATGCCAGGATATTATTCAAAGTTAAATTTGTGTA  350

seq1  TATATACATCACACTCACAGAACACATGTGTTTCCATTAATTTTCTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATCACACTCACAGAACACATGTGTTTCCATTAATTTTCTGATG  400

seq1  CCTGATTTTGGAAGAAATCCCAGGAGCTAACAAAGAGAAATTAGAATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTTTGGAAGAAATCCCAGGAGCTAACAAAGAGAAATTAGAATCAG  450

seq1  GTATGTTGATACATACCTGCAATCCCAACATTTGGTCAGGGAGATTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTGATACATACCTGCAATCCCAACATTTGGTCAGGGAGATTGACT  500

seq1  TAATAGCATACAGGTCTACACAAAGAAGACCAGGACAGCCAAGGCTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCATACAGGTCTACACAAAGAAGACCAGGACAGCCAAGGCTATAG  550

seq1  TGTGAAACTATGTCTCAAAAAAAATCACAAAGATCAGTCTGACTTGTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAACTATGTCTCAAAAAAAATCACAAAGATCAGTCTGACTTGTTCA  600

seq1  GAGGCTACAAGAATTTTGGTTCAGCAGCAAGAGCATCTAGCACCGTAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTACAAGAATTTTGGTTCAGCAGCAAGAGCATCTAGCACCGTAACA  650

seq1  TTGCAACAACACATATTTCTTTGATCAGACCTGTCATCAAGTGTACATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACAACACATATTTCTTTGATCAGACCTGTCATCAAGTGTACATTT  700

seq1  CCTTCCCCAAGCTAGGTATAAATAGAAGTGAGTTCTAATCTAAAAGAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCCAAGCTAGGTATAAATAGAAGTGAGTTCTAATCTAAAAGAGGG  750

seq1  AAGATAAAAATATCAGAGAACTTGGTCCATGCCTACTTGTACTGAAGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAAAATATCAGAGAACTTGGTCCATGCCTACTTGTACTGAAGCAG  800

seq1  TTACTGATTGGTATCCAGAATACAACAGTAACAATCTAAGGTGGATATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGATTGGTATCCAGAATACAACAGTAACAATCTAAGGTGGATATCA  850

seq1  TTCTAGAGGAGACAATAGAAGCAAAGGGAGGTACTTACCTGCCAAGATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAGGAGACAATAGAAGCAAAGGGAGGTACTTACCTGCCAAGATTA  900

seq1  CAGAAGAATTACATGTCCCTCACTCTGAATAAAACCTACAGGAGGGAAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAATTACATGTCCCTCACTCTGAATAAAACCTACAGGAGGGAAGA  950

seq1  CTGTAGTTGTTGGTCTTCTTATAAGTGAAGAGATGAGAAGAACTTTAATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTTGTTGGTCTTCTTATAAGTGAAGAGATGAGAAGAACTTTAATC  1000

seq1  TCAGTTGGTATGCTGCTTGCTTCTTGTGCATGAAGACTTGGGTTTGACC-  1049
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  TCAGTTGGTATGCTGCTTGCTTCTTGTGCATGAAGACTTGGG-TTGACCT  1049

seq1  TCTAACATAG-CAAGGAAAAA-GAAGAAGAAAAGTTAATTTGGGTACATA  1097
      |||||||||| |||||||||| ||||||| |||||  | |||||||||| 
seq2  TCTAACATAGCCAAGGAAAAAGGAAGAAG-AAAGT--AATTGGGTACATT  1096

seq1  AAATCATGAAGATAAGGTATGATGAG-AGTCAGAAGAAAATCAGCAACAG  1146
      ||||||||||||| |||| ||||||| ||||| ||| || || || || |
seq2  AAATCATGAAGAT-AGGT-TGATGAGAAGTCA-AAGGAATTC-GC-ACGG  1141

seq1  CAACAACGACTTTATTATCAAATGAGCATCAGTTGAGATAGATAGACTTC  1196
      ||   |||||||| || || | || || || || || || ||||||||||
seq2  CA--CACGACTTTTTTTTC-ATTGGGCCTC-GTGGA-AT-GATAGACTTC  1185

seq1  AGGG  1200
      ||||
seq2  AGGG  1189


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