BAC Information

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BAC

Clone NameB6Ng01-096N07
Chromosome1 (Build37)12 (Build37)
Map Location 187,571,249 - 187,572,15332,213,951 - 32,214,298
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneMosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1, Iars2, Bpnt1, Eprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik
Downstream geneLOC677785, Lyplal1, Tgfb2, Rrp15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096N07.bB6Ng01-096N07.g
ACCDH907367DH907368
length900476
definitionDH907367|Mus musculus domesticus DNA, BAC clone: B6Ng01-096N07, 5' end.DH907368|Mus musculus domesticus DNA, BAC clone: B6Ng01-096N07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(187,571,249 - 187,572,153)(32,213,951 - 32,214,298)
sequence
gaattctttctgtggagatcatatggaccagagaggagaaaaagagtcca
gacagaaatcctggtgataccagaaaccctagactcatggcaaagtgtac
tcagcaactcctgtgaagtggaactgtatacccaaaggcattccagtctg
tattagttgcttttcttgttgctgtaaccaaatacccaacaagaaataat
ttaagggagtaaagagtcacatgtcttttccttttcctttttttttttcc
ttttggcttagagcttaaaaaggaatacagtccctcctgacagagaaagc
attgcaacagagcatcaatcaggtgggttggcaatatttcttgtgcgggc
aaaaagcaaagagagatgggaagctcagttcagctatcaaacctcaaggc
ccaccctagtcactttatgaccaggctccatttcctaaaaagttccagaa
ccttccaaaacagcactaccatttgggggccaaggactcaaacacatgta
cctataggagatattttatattaaaacaagggcaaaagctaaaagtatat
gaaggtagtcccagaattctagaaagggagggagaaaagagggtaggaga
gtgaatgagagatcctcctagacattctttcctaaaggacccacttataa
acttactctcatgatcataacctgtcatacatcactggcccactctcctt
ttaaagatgtcacctctcaaaactagtcacggagattatgtttccaacat
atgctttgggaaaggcacgtgaaccccagcaataggaaaagatgaaccca
taatattttgttgtgtcagacagtcacgaggcctaccggattgactaaat
gagtcactagctctccaaacatcctataaccatctaacaaacagccacct

acttcttggcaaaatgggaagacttgaagcctaatttgaaacaataggag
tacaagattttctttaaaataagaggctatatcataaggtaaaagattgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgagatacagaaaagttacagca
acagctgcaaacattcacgaaattacagttgcagtttcctatcactttct
attattttcagttacttttggcactgagtttgtaccttgtcctcttcagt
aaaagtgtttaaaatgagtacaaatacttgtttttaatggggaggggtca
gactctgtttgcaggggctctgtgggtttcatttatccctgccctttcct
gtcgcctacataacagatcagctgttctcagatccacacctgttatggcc
catgcgcatctggataccaaaggagggtcagttgtctaactgctttcatc
agagaaaggaccgggtgggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_187571249_187572153
seq2: B6Ng01-096N07.b_45_944

seq1  GAATTCTTTCAGTGGAGATCATAAGGACCAGAGAGGAGAAAAAGAGTCCA  50
      |||||||||| |||||||||||| ||||||||||||||||||||||||||
seq2  GAATTCTTTCTGTGGAGATCATATGGACCAGAGAGGAGAAAAAGAGTCCA  50

seq1  GACAGAAATCCTGGTGATACCAGAAACCCTAGACTCATGGCAAAGTGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAATCCTGGTGATACCAGAAACCCTAGACTCATGGCAAAGTGTAC  100

seq1  TCAGCAACTCCTGTGAAGTGGAACTGTATACCCAAAGGCATTCCAGTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAACTCCTGTGAAGTGGAACTGTATACCCAAAGGCATTCCAGTCTG  150

seq1  TATTAGTTGCTTTTCTTGTTGCTGTAACCAAATACCCAACAAGAAATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTTGCTTTTCTTGTTGCTGTAACCAAATACCCAACAAGAAATAAT  200

seq1  TTAAGGGAGTAAAGAGTCACATGTCTTTTCCTTTTCCTTTTTTTTTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGAGTAAAGAGTCACATGTCTTTTCCTTTTCCTTTTTTTTTTTCC  250

seq1  TTTTGGCTTAGAGCTTAAGAAGGAATACAGTCCCTCCTGACAGAGAAAGC  300
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTTGGCTTAGAGCTTAAAAAGGAATACAGTCCCTCCTGACAGAGAAAGC  300

seq1  ATTGCAACAGAGCATCAATCAGGTGGGTTGGCAATATTTCTTGTGCGGTC  350
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATTGCAACAGAGCATCAATCAGGTGGGTTGGCAATATTTCTTGTGCGGGC  350

seq1  AGAAAGCAGAGAGAGATGGGAAGCTCAGTTCAGCTATCAAACCTCAAGGC  400
      | |||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCAAAGAGAGATGGGAAGCTCAGTTCAGCTATCAAACCTCAAGGC  400

seq1  CCACCCTAGTCACTTTATGACCAGGCTCCATTTCCTAAAAAGTTCCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTAGTCACTTTATGACCAGGCTCCATTTCCTAAAAAGTTCCAGAA  450

seq1  CCTTCCAAAACAGCACTACAATTTGGGGGCCAAGGACTCAAACACATGTA  500
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCTTCCAAAACAGCACTACCATTTGGGGGCCAAGGACTCAAACACATGTA  500

seq1  CCTATAGGAGATATTTTATATTAAAACAAGGGCAAAAGCTAAAAGTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAGGAGATATTTTATATTAAAACAAGGGCAAAAGCTAAAAGTATAT  550

seq1  GAAGGTAGTCCCAGAATTCTAGAAAGGGACAGAGAAAAGAGGGAAGGAGA  600
      |||||||||||||||||||||||||||||  |||||||||||| ||||||
seq2  GAAGGTAGTCCCAGAATTCTAGAAAGGGAGGGAGAAAAGAGGGTAGGAGA  600

seq1  GTAAATGAGAGATCCTCAAAGACATTCTTTCATAAAGGACCCACTTATAA  650
      || ||||||||||||||  |||||||||||| ||||||||||||||||||
seq2  GTGAATGAGAGATCCTCCTAGACATTCTTTCCTAAAGGACCCACTTATAA  650

seq1  ACTTACTCTCATGATAATAACCT-TCGTACATCAGTGGCCCACTCTCCTT  699
      ||||||||||||||| ||||||| || ||||||| |||||||||||||||
seq2  ACTTACTCTCATGATCATAACCTGTCATACATCACTGGCCCACTCTCCTT  700

seq1  TTAAAGATGTCACCTCTCAAAACTAGTCACGGAGATTATGTTTCCAACAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATGTCACCTCTCAAAACTAGTCACGGAGATTATGTTTCCAACAT  750

seq1  ATGCTTTGGGAAAGGCACGTGAACCAGCAGCAGTAGGAATAAGATGAACC  799
      |||||||||||||||||||||||||  ||||| |||||| ||||||||||
seq2  ATGCTTTGGGAAAGGCACGTGAACC-CCAGCAATAGGAA-AAGATGAACC  798

seq1  CAGAGTATTTTTTTGTGTCAGAAAGTAAGGAGGTACTAACAGATTAACTA  849
      || | |||||| |||||||||| ||| | ||||  ||| | |||| ||||
seq2  CATAATATTTTGTTGTGTCAGACAGTCACGAGG-CCTACCGGATTGACTA  847

seq1  AATGAGTCAACTAGCTCTCCAACCATCCATATAACCATCTAACCAAACAG  899
      |||||||| ||||||||||||| ||||| ||||||||||||| |||||||
seq2  AATGAGTC-ACTAGCTCTCCAAACATCC-TATAACCATCTAA-CAAACAG  894

seq1  CCACCT  905
      ||||||
seq2  CCACCT  900

seq1: chr12_32213951_32214298
seq2: B6Ng01-096N07.g_201_548

seq1  GAGATACAGAAAAGTTACAGCAACAGCTGCAAACATTCACGAAATTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACAGAAAAGTTACAGCAACAGCTGCAAACATTCACGAAATTACAG  50

seq1  TTGCAGTTTCCTATCACTTTCTATTATTTTCAGTTACTTTTGGCACTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTTTCCTATCACTTTCTATTATTTTCAGTTACTTTTGGCACTGAG  100

seq1  TTTGTACCTTGTCCTCTTCAGTAAAAGTGTTTAAAATGAGTACAAATACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACCTTGTCCTCTTCAGTAAAAGTGTTTAAAATGAGTACAAATACT  150

seq1  TGTTTTTAATGGGGAGGGGTCAGACTCTGTTTGCAGGGGCTCTGTGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAATGGGGAGGGGTCAGACTCTGTTTGCAGGGGCTCTGTGGGTT  200

seq1  TCATTTATCCCTGCCCTTTCCTGTCGCCTACATAACAGATCAGCTGTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATCCCTGCCCTTTCCTGTCGCCTACATAACAGATCAGCTGTTCT  250

seq1  CAGATCCACACCTGTTATGGCCCATGCGCATCTGGATACCAAAGGAGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCACACCTGTTATGGCCCATGCGCATCTGGATACCAAAGGAGGGT  300

seq1  CAGTTGTCTAACTGCTTTCATCAGAGAAAGGACCGGGTGGGGGGGGGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTCTAACTGCTTTCATCAGAGAAAGGACCGGGTGGGGGGGGGG  348