BAC Information

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BAC

Clone NameB6Ng01-097D17
Chromosome1 (Build37)
Map Location 123,530,994 - 123,531,666
singlet/doubletsinglet
Overlap genenone
Upstream geneAI848258, Insig2, Ccdc93, LOC100041926, Htr5b, LOC666656, Ddx18
Downstream geneLOC666971
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097D17.bB6Ng01-097D17.g
ACCDH907661DH907662
length1,139994
definitionDH907661|Mus musculus domesticus DNA, BAC clone: B6Ng01-097D17, 5' end.DH907662|Mus musculus domesticus DNA, BAC clone: B6Ng01-097D17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttaggtatgagccccatttttcaatgggattatttggtt
ttctggagtccaccttcttgagttctttatatatattagatattagtccc
ctatctgatttaggataggtaaagatactttcccaatctgttggtggcct
tttttgtcttattgacttttaccttgcagaagctttgcaattttatgagg
tcccatttggctattctctatcttacagtacaagccagtgctgttctagt
caggaatttttcccctatgcccatatcttcaagggttttccccacgttct
cctctacaagtttcactgtctctagttttatggggagttccttgatccaa
ttaggtttgactttggtataaggagataggaatggatcaattcacattct
tctatatgataaccaccagttgtgccagcaccatttgttgaaaatgctgt
cttctttccactggatggttttatttcccttgtcaaagatcaactgacta
caggtgtgtgggttcatttctgggtcttcagttctattccattggtctac
ttgtctgtcactataccagtaccatgctgtttttatcacaattgctctgt
agtacagctttaggttgggcatgatgattcccccagaggatcttttatcc
ttgaggagagttttttgctatcctaggtttttttattattccagatgaat
ttgcagatcgccctttctaattctttgaaaaattgagttggaattttgat
ggggattgcattgaatctgtagattgcttttggcaagatagccattttta
ctatattgatcctgccaatccatgagcatgggagatctttccatcttctg
agatcttctttaatttctttcttcagagacttgaagttcttatcatacag
atctttcatttccttagttagagtcacgccaaatgttttatattatttct
gactatgtgaaggtgttgtttccctaattcatctcagcctgttgatcctt
tgtgtgagaagggcattgacttgttaatttataatcagcctacttcactt
gaagctgtttaatacgatagaggtcctctggtggaattttaaggcaccta
aataacacctatctcgaaccatcctgcgaaagagtgtaa
gaattctaggccagtgagagaccctgactcaaaacacaataaacaaacca
aaaccaaaaccaaaaccaaaaccaaaaccaaaaccaaccaaccaacccaa
aacccccaaggtagagagcagttgagcaataaaagattgtcctttgatct
cctttgatagccaggtacacacaggcacatgacacaagctagggactcct
aagaagaggaaacctatactgagaaatgcctctgtcaacctgccctgtaa
gcaagtctgtggaagctttctttggatgagtaattcatgtgggaggaccc
aacacattttgtgttatccaagccctggacaggtggtcctaggttgtata
agaaagcaggctgggcaatccatgaggaataaacctattagcagcatttc
tcttttgggctccacttccattcctgtctttacgtttttgccttgatttc
ctaacctgacttccctttgaaagacccacaatgtgaggactcccccacgt
tctgacttaggagaggcgacaccccaaatcactcacaagaaacggtcttg
ctacaaactgcaagaagacttttatttaagagcgctctcgggcccatggt
catacaccacgcaggggtagaggaccgtggcgccctgagtagctgggtaa
gggggtatttcaaggaagaaaccacaactcaaggaactggggagggcatt
gttggaaaataccaaagataccagttatgagtcccaaggaagtgcaaagt
cacaagagtcacaaggaatacctggtaattgttcgggttatctctcaaga
cactttctaagagcccctaacaatagcacattctttgagtgaacactctt
tgaacccaggaagcgggtgggtggaggatgtccctatctattttatgatt
agcataccttggagtattaagtcacagaggtcacattcccaagcctgggc
ctaaaggcctagaattttgtttttacatatactttcacctcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_123530994_123531666
seq2: B6Ng01-097D17.g_72_744

seq1  GAATTCTAGGCCAGTGAGAGACCCTGACTCAAAACACAATAAACAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCCAGTGAGAGACCCTGACTCAAAACACAATAAACAAACCA  50

seq1  AAACCAAAACCAAAACCAAAACCAAAACCAAAACCAACCAACCAACCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAAACCAAAACCAAAACCAAAACCAAAACCAACCAACCAACCCAA  100

seq1  AACCCCCAAGGTAGAGAGCAGTTGAGCAATAAAAGATTGTCCTTTGATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCAAGGTAGAGAGCAGTTGAGCAATAAAAGATTGTCCTTTGATCT  150

seq1  CCTTTGATAGCCAGGTACACACAGGCACATGACACAAGCTAGGGACTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGATAGCCAGGTACACACAGGCACATGACACAAGCTAGGGACTCCT  200

seq1  AAGAAGAGGAAACCTATACTGAGAAATGCCTCTGTCAACCTGCCCTGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGGAAACCTATACTGAGAAATGCCTCTGTCAACCTGCCCTGTAA  250

seq1  GCAAGTCTGTGGAAGCTTTCTTTGGATGAGTAATTCATGTGGGAGGACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCTGTGGAAGCTTTCTTTGGATGAGTAATTCATGTGGGAGGACCC  300

seq1  AACACATTTTGTGTTATCCAAGCCCTGGACAGGTGGTCCTAGGTTGTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATTTTGTGTTATCCAAGCCCTGGACAGGTGGTCCTAGGTTGTATA  350

seq1  AGAAAGCAGGCTGGGCAATCCATGAGGAATAAACCTATTAGCAGCATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCAGGCTGGGCAATCCATGAGGAATAAACCTATTAGCAGCATTTC  400

seq1  TCTTTTGGGCTCCACTTCCATTCCTGTCTTTACGTTTTTGCCTTGATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGGGCTCCACTTCCATTCCTGTCTTTACGTTTTTGCCTTGATTTC  450

seq1  CTAACCTGACTTCCCTTTGAAAGACCCACAATGTGAGGACTCCCCCACGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCTGACTTCCCTTTGAAAGACCCACAATGTGAGGACTCCCCCACGT  500

seq1  TCTGACTTAGGAGAGGCGACACCCCAAATCACTCACAAGAAACGGTCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTTAGGAGAGGCGACACCCCAAATCACTCACAAGAAACGGTCTTG  550

seq1  CTACAAACTGCAAGAAGACTTTTATTTAAGAGCGCTCTCGGGCCCATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAACTGCAAGAAGACTTTTATTTAAGAGCGCTCTCGGGCCCATGGT  600

seq1  CATACACCACGCAGGGGTAGAGGACCGTGGCGCCCTGAGTAGCTGGGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACCACGCAGGGGTAGAGGACCGTGGCGCCCTGAGTAGCTGGGTAA  650

seq1  GGGGGTATTTCAAGGAAGAAACC  673
      |||||||||||||||||||||||
seq2  GGGGGTATTTCAAGGAAGAAACC  673