BAC Information

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BAC

Clone NameB6Ng01-097L22
Chromosome1 (Build37)
Map Location 112,552,945 - 112,553,918
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666508, Cdh7, LOC100041429, EG626652
Downstream geneCdh19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097L22.bB6Ng01-097L22.g
ACCDH908030DH908031
length1,247976
definitionDH908030|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L22, 5' end.DH908031|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagaaagtctttaatatctttcttatttctcccctgaacaagtt
atcattgagtagagagttgttcagtttccatgagcaagcaggttttctgt
tgtgtttgttattgaagtccagccttagagcatggcgatctagaagaata
catgggattatttcaatcttcttgtatctgttaatgcttgatttgtctgt
gattgtatggtcagttttggagagttcccataaggtgctgagaagaaggt
agatctttttgaaatgaaatatcttgtagatatctgttaaatccatttga
tgaaacctctgttactttcattctgtctctgtttagtttctgtttcaatg
acctccccattcagtgtctgagagtggggtgttgaagtctcccattataa
ttttgtgtggttcaatgtgtgtctgagatttagtaaagtttcttttacaa
attagggtgctcttgcatttgaggcacaaaattaagacttcctgttaatg
gaatttttctttgatgagtattgtttttcctatcctttttgataactttt
ggttgaaagactgttttactaaatatcaggatggttacaccagcttgttt
cttggaaccatttttttttaatcttatcctctcccctttcttctcaggta
gtgtttctcattgtcactgtgctgtgtttattgtatgtggcaaaatgctg
gttggtgtttttgtaaccattttgttatcctaatttttttcttttcttca
ttggatattttatatatttacattttaaatgttatcccttttcctggttt
tcccctccagaaccccctctcccatcctccctccccctgcttctatgagg
gtgcactcctacctacctaaccacctagccactccctgcttcttgccctg
gcatttccctacactggggacagtctttgtagtttatgacctctagcaaa
gaaaacaagaccaaacaaacacacgcatttaccatgaaaaaaaacatttg
tgccttacaaattcaggcaataaaggattagaaattctactcaattaaga
atcataaaaacaaaatctgcgggcattctctttttaggctagggagtggc
atgtgtgatgaccatcctagttagtcctggatttattattaaactactcg
tgaaccatattagcaagtaccttagccattggaactacatggtgtctttg
ccgctctggaaagagagtacacatttgtggtgaagagacatactgtg
gaattctttgattccctttgaacttaaggatggcatttaacctctgatat
ctgtgtgcccattttaaccgcactttttgttatatatttgcttatttagt
tattcacacacacagatacacagacacacacacacaaacatattcttaag
caaagaatgctacttatacacatacacacacatatattcttaagcaaaga
atgctatttaagtgggaaattttataattattaaaattttgacaatattc
ttttttgaatatacaaagtcttttaaataataatttctctgaatgctcca
ttaaaaatgaacctatgttgtgtttcctctaatactgcttttattcttgt
gcttatggggtatacaatcatgcaataatgaacatatgcatatgtatcga
ataatatattttctttttaatatctatccctttctgaaatgcagaccaat
gtagtagatgggcttggttctgtttgcatgttgataataattctgccttc
ctgtgaggggttgtggacatgtagtgagtcacactctgatgacttcttgt
gacgcaatcccctaatgaataaagaaaacaatcactgggcaagtagacag
gacttccgtgttggagaagacaagagagtgatggaggaggagctagaagg
aaagtttagcagaagcatgtggcctggagaaaccgcaagttcaaagggac
ctcataaatggggaagagggtagtgtagtggtagatctgcccaatatagg
tgcagatcatgtattcatatcaaatttagttgtgtgttttttgcccaagc
ttatttaggttggagattttaccacaagacaatgtatctctttatttaga
tctattaattaattaattacttaatttatttattttagattttttaggaa
attatacctacaggaattaatatatatattatttttagtacacacacatc
acactttattaatatatttctttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_112552945_112553918
seq2: B6Ng01-097L22.g_68_1043

seq1  GAATTCTTTGATTCCCTTTGAACTTAAGGATGGCATTTAACCTCTGATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATTCCCTTTGAACTTAAGGATGGCATTTAACCTCTGATAT  50

seq1  CTGTGTGCCCATTTTAACCGCACTTTTTGTTATATATTTGCTTATTTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGCCCATTTTAACCGCACTTTTTGTTATATATTTGCTTATTTAGT  100

seq1  TATTCACACACACAGATACACAGACACACACACACAAACATATTCTTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACACACACAGATACACAGACACACACACACAAACATATTCTTAAG  150

seq1  CAAAGAATGCTACTTATACACATACACACACATATATTCTTAAGCAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAATGCTACTTATACACATACACACACATATATTCTTAAGCAAAGA  200

seq1  ATGCTATTTAAGTGGGAAATTTTATAATTATTAAAATTTTGACAATATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATTTAAGTGGGAAATTTTATAATTATTAAAATTTTGACAATATTC  250

seq1  TTTTTTGAATATACAAAGTCTTTTAAATAATAATTTCTCTGAATGCTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAATATACAAAGTCTTTTAAATAATAATTTCTCTGAATGCTCCA  300

seq1  TTAAAAATGAACCTATGTTGTGTTTCCTCTAATACTGCTTTTATTCTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATGAACCTATGTTGTGTTTCCTCTAATACTGCTTTTATTCTTGT  350

seq1  GCTTATGGGGTATACAATCATGCAATAATGAACATATGCATATGTATCGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATGGGGTATACAATCATGCAATAATGAACATATGCATATGTATCGA  400

seq1  ATAATATATTTTCTTTTTAATATCTATCCCTTTCTGAAATGCAGACCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATATTTTCTTTTTAATATCTATCCCTTTCTGAAATGCAGACCAAT  450

seq1  GTAGTAGATGGGCTTGGTTCTGTTTGCATGTTGATAATAATTCTGCCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAGATGGGCTTGGTTCTGTTTGCATGTTGATAATAATTCTGCCTTC  500

seq1  CTGTGAGGGGTTGTGGACATGTAGTGAGTCACACTCTGATGACTTCTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGGGGTTGTGGACATGTAGTGAGTCACACTCTGATGACTTCTTGT  550

seq1  GACGCAATCCCCTAATGAATAAAGAAAACAATCACTGGGCAAGTAGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCAATCCCCTAATGAATAAAGAAAACAATCACTGGGCAAGTAGACAG  600

seq1  GACTTCCGTGTTGGAGAAGACAAGAGAGTGATGGAGGAGGAGCTAGAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCGTGTTGGAGAAGACAAGAGAGTGATGGAGGAGGAGCTAGAAGG  650

seq1  AAAGTTTAGCAGAAGCATGTGGCCTGGAGAAACCGCAAGTTCAAAGGGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTAGCAGAAGCATGTGGCCTGGAGAAACCGCAAGTTCAAAGGGAC  700

seq1  CTCATAAATGGGGAAGAGGGTAGTGTAGTGGTAGATCTGCCCAATATAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAAATGGGGAAGAGGGTAGTGTAGTGGTAGATCTGCCCAATATAGG  750

seq1  TGCAGATCATGTATTCATATC-AATTTAGTTGTGTGTTTTTTGCCCAAGC  799
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGCAGATCATGTATTCATATCAAATTTAGTTGTGTGTTTTTTGCCCAAGC  800

seq1  TTATTTAGGTTGGAGA-TTTACCACAAGACAATGTATCTCTTTATTTAGA  848
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTATTTAGGTTGGAGATTTTACCACAAGACAATGTATCTCTTTATTTAGA  850

seq1  TCTATTAATTAATTAATTACTTAATTTATTTA-TTTAGATTTTTTAAGAA  897
      |||||||||||||||||||||||||||||||| ||||||||||||| |||
seq2  TCTATTAATTAATTAATTACTTAATTTATTTATTTTAGATTTTTTAGGAA  900

seq1  ATTATACCTACA-GAATTAATATATATATTATTATATAGTACACACACAT  946
      |||||||||||| |||||||||||||||||||| | ||||||||||||||
seq2  ATTATACCTACAGGAATTAATATATATATTATT-TTTAGTACACACACAT  949

seq1  CACACATTATTATTATTATTTCTTTTTT  974
      ||||| |||||| || ||||||||||||
seq2  CACACTTTATTAATA-TATTTCTTTTTT  976