BAC Information

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BAC

Clone NameB6Ng01-099A04
Chromosome1 (Build37)
Map Location 110,837,889 - 110,838,616
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435640, EG626474
Downstream geneEG666508
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099A04.bB6Ng01-099A04.g
ACCDH908927DH908928
length999737
definitionDH908927|Mus musculus domesticus DNA, BAC clone: B6Ng01-099A04, 5' end.DH908928|Mus musculus domesticus DNA, BAC clone: B6Ng01-099A04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagctcattctccagcaccatatctgcctggatgctgccatat
ttcctgccataatgataatggactgaacctctgaaactttaagccaaccc
aaatttaaatatttgcctttataagagttgccttcagttttgaagatata
tctttttgaacatagtgtctgcttcatgagatatctatttaatgaaataa
agaatgaattaatacatcaaaaaaaaaaaaaaaaaagagttgccttggtc
aagatgtctcttaacaacaatggaaaccttaattaagacatgttgtagtc
tccatcagttacaaagacaagatcacctgtagaagaatggagactacatt
tatctatggatattatattaaaataatttatttatagatttatagattat
tagaaatttttatgttggtttaatcaattactcaaaaatcaattaatccc
tttttctccagtcaccatgattatactagcactaaaatgtcaggtaggtt
tttagtaccagacatggtatctttttggttaggtcttaagtccaattaga
gagttactgactaccaccaaggtatctgtgacagtactgctcaatagggt
tctcattccatactggacattgaggtggttaatcaatggataagagcatt
gattacctccttccgctgtatgtttccataatactttttgttactaataa
atctagtaatcatgaagggcacattcaggtctgtttcattttagtagact
attctatatgatataaaataaaggaacaattttatttatttttactttgg
ttatatgtatagggttttcttgatacaggttgtgaagatgatcattcttc
tcccattgtttattctgagcttcaagggcacatttattatgtacatgtag
atttatttctgggttcttcgtttgttccaatgatctttgtgtctttatcc
cagcatcatgatactttaacactttaaatcacatgggatactagctttg
gaattcagaactcttcagctggggaatggtggtaatgaagtgttcatgaa
acacagactgttgagaaggattcaactgtgtgaattcagaactcttcagc
tggggaacagggtacccgtaagtatagctttacaaggtaagtctggcctt
gaactttctaacgaaattcaagacagtctatcagaagtaaagtgggaaat
agctttacaaggtaagtctggtcttgaactttctaacaaaattcaagaca
gtctatcagaagtaaagtgggaaatagctttacaaggtatgtttggcctt
gaactttttctagtgttaggagcctttttgttccttttcacatgttatca
agcggttaaggcagggctgaaaattctggatgaaattcagggcaatctat
cagaagtaacgcggggagagagagtaggagcaaagaggaaatatggtaca
caaaataagtatacaggcctttccacgggtcttgaacctgaggaaaagtt
taggtcaggtaagaatacctggggagagattggaaggaaggagaagggtt
tcggcaccaactcttacccgcgttctcgcgaccggccaggaagaacgcaa
caaaccggaatcttctgcggcaaaagcttttattgcttacatcttcagga
gcaagagtgcaagagagagaaaaagaacaagaaaagaacaagaacaagag
tgctagagatagattaatatctatagcatgaaatcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_110837889_110838616
seq2: B6Ng01-099A04.b_49_776

seq1  GAATTCTCAGCTCATTCTCCAGCACCATATCTGCCTGGATGCTGCCATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCTCATTCTCCAGCACCATATCTGCCTGGATGCTGCCATAT  50

seq1  TTCCTGCCATAATGATAATGGACTGAACCTCTGAAACTTTAAGCCAACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCCATAATGATAATGGACTGAACCTCTGAAACTTTAAGCCAACCC  100

seq1  AAATTTAAATATTTGCCTTTATAAGAGTTGCCTTCAGTTTTGAAGATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAATATTTGCCTTTATAAGAGTTGCCTTCAGTTTTGAAGATATA  150

seq1  TCTTTTTGAACATAGTGTCTGCTTCATGAGATATCTATTTAATGAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTGAACATAGTGTCTGCTTCATGAGATATCTATTTAATGAAATAA  200

seq1  AGAATGAATTAATACATCAAAAAAAAAAAAAAAAAAGAGTTGCCTTGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAATTAATACATCAAAAAAAAAAAAAAAAAAGAGTTGCCTTGGTC  250

seq1  AAGATGTCTCTTAACAACAATGGAAACCTTAATTAAGACATGTTGTAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTCTCTTAACAACAATGGAAACCTTAATTAAGACATGTTGTAGTC  300

seq1  TCCATCAGTTACAAAGACAAGATCACCTGTAGAAGAATGGAGACTACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCAGTTACAAAGACAAGATCACCTGTAGAAGAATGGAGACTACATT  350

seq1  TATCTATGGATATTATATTAAAATAATTTATTTATAGATTTATAGATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATGGATATTATATTAAAATAATTTATTTATAGATTTATAGATTAT  400

seq1  TAGAAATTTTTATGTTGGTTTAATCAATTACTCAAAAATCAATTAATCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTTTTATGTTGGTTTAATCAATTACTCAAAAATCAATTAATCCC  450

seq1  TTTTTCTCCAGTCACCATGATTATACTAGCACTAAAATGTCAGGTAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCCAGTCACCATGATTATACTAGCACTAAAATGTCAGGTAGGTT  500

seq1  TTTAGTACCAGACATGGTATCTTTTTGGTTAGGTCTTAAGTCCAATTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTACCAGACATGGTATCTTTTTGGTTAGGTCTTAAGTCCAATTAGA  550

seq1  GAGTTACTGACTACCACCAAGGTATCTGTGACAGTACTGCTCAATAGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTACTGACTACCACCAAGGTATCTGTGACAGTACTGCTCAATAGGGT  600

seq1  TCTCATTCCATACTGGACATTGAGGTGGTTAATCAATGGATAAGAGCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCCATACTGGACATTGAGGTGGTTAATCAATGGATAAGAGCATT  650

seq1  GATTACCTCCTTCCGCTGTATGTTTCCATAATACTTTTTGTTACTAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACCTCCTTCCGCTGTATGTTTCCATAATACTTTTTGTTACTAATAA  700

seq1  ATCTAGTAATCATGAAGGGCACATTCAG  728
      ||||||||||||||||||||||||||||
seq2  ATCTAGTAATCATGAAGGGCACATTCAG  728