BAC Information

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BAC

Clone NameB6Ng01-099C04
Chromosome1 (Build37)
Map Location 148,946,735 - 148,947,494
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099C04.bB6Ng01-099C04.g
ACCDH909013DH909014
length7641,189
definitionDH909013|Mus musculus domesticus DNA, BAC clone: B6Ng01-099C04, 5' end.DH909014|Mus musculus domesticus DNA, BAC clone: B6Ng01-099C04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtgcattaacaaattactctttaagtgggcattctatagagt
tcattttctctttttttaaggaagatgcaaatattaaaaaaattgctttc
ttacattataaatagcaacaataatccaataccttgaacctatttggata
ttaaaagtagctgtttatgctatgttactttataggaaataattaaaaca
aaataaaattttgttaggtattgtgattcctagaacaatccccccccctt
ttttttctgttaaatttgtgattttgtttaggcacaattctagtatgttt
gtagagaacattctagaaaacatccctgaatgaagatataaataaatgtg
atttaattttggtgctgcctaaaatagttgtttttcgtgtattttattaa
aaccacatatatatgcatattttatacatagagagagagtaagtgtatat
acatgtattatttgtgtgggagggtgttcatgtgtatgtgtataaatgta
tgcaaattctgtaacaacatgtctgctcagatgatacaagtgtctgtgca
cttctaaccaatatgtaactaaatacaaacataaactgttagttgaaaaa
taaatatgattttgatgtgtttgaaagtaattgaagacctaaacttgaag
ttatcaatgattactcaaaataaactagaaaacattttaccttgagaaat
acagattataggttccacttaattattgaggtgttatgcatagggataat
attctttgttggat
gaattctttgtttagctatgttccccatttttaatagggttatttggttc
tctggagtctaaattattctattggatatagccctctttcagatgtaggg
ttgataaagatattttcccaatctgttggtgacagttttatcctatttac
agtgtcctttgccttacagaagatttgcaattttgtgaggtcccatttgt
caattcttgatcttagagcataagccattggtgttctcttcaggaaactt
tcctctgtgcccatgtgtttgaggctcttccccattttctcttctattag
tttcagtgtatcttgttttatgtggaggtccttgatccacttgcccttga
gttttgtatcaggagataggaatggatagatttgcattcttctacatgct
aatcacaagttgaaccagtaccatttgttgaaatgctgccttttttcact
ggattgctttagctcttttgttaaagatcaagtgaccatagttgtatggg
ttcatttctgggtcttcatctcagttccactcagtttctacctgcctgtc
tctgttccaataccatgcaatttttatcactattgttctgtaatacagct
tgaggtcaagattgatgattcctcccagaagttcatttattgttgagaat
agtttttgctatcctggggtttttgttattccagatgaatttgcaaattg
ttcttttgaactctatgaagaattgagttggaattttgatggggattgca
gtgaatctgtggattgctttcagcaagatagccatttttactatagtaat
cctgacaattcatgggcacagaagatcctttccatctcctgggatcttca
gtttctcttatcagaagttcttgtcatacagatctttgacttgcttggtt
acattcacaccaagttctttatagtattgtgactattgtgaaggtgatgt
tccctaatttctttctcagctgtttatcttggaaaagaagaggctactga
tttgttgagttaattttctatcagccactttgctgagttgttatcatctt
taggaagtctttagagatttggggtcacttagatatactatatatcatct
ggcagaatgtgaattttgacttcctcctttcaattatacattcgacccgt
tccttgctcatgcctggctaagaatgcctactaatagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148946735_148947494
seq2: B6Ng01-099C04.b_45_808 (reverse)

seq1  ATCCTACAAAG-ATATTAT-CCTATGCATAACACCTCAATAATTAAGTGG  48
      |||| |||||| ||||||| ||||||||||||||||||||||||||||||
seq2  ATCCAACAAAGAATATTATCCCTATGCATAACACCTCAATAATTAAGTGG  50

seq1  AA-CTATAATCTGTATTTCTCAAGGT-AAATGTTTTCTAGTTTATTTTGA  96
      || ||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AACCTATAATCTGTATTTCTCAAGGTAAAATGTTTTCTAGTTTATTTTGA  100

seq1  GTAATCATTGATAACTTCAAGTTTAGGTCTTCAATTACTTTCAAACACAT  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCATTGATAACTTCAAGTTTAGGTCTTCAATTACTTTCAAACACAT  150

seq1  CAAAATCATATTTATTTTTCAACTAACAGTTTATGTTTGTATTTAGTTAC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCATATTTATTTTTCAACTAACAGTTTATGTTTGTATTTAGTTAC  200

seq1  ATATTGGTTAGAAGTGCACAGACACTTGTATCATCTGAGCAGACATGTTG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGTTAGAAGTGCACAGACACTTGTATCATCTGAGCAGACATGTTG  250

seq1  TTACAGAATTTGCATACATTTATACACATACACATGAACACCCTCCCACA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAATTTGCATACATTTATACACATACACATGAACACCCTCCCACA  300

seq1  CAAATAATACATGTATATACACTTACTCTCTCTCTATGTATAAAATATGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAATACATGTATATACACTTACTCTCTCTCTATGTATAAAATATGC  350

seq1  ATATATATGTGGTTTTAATAAAATACACGAAAAACAACTATTTTAGGCAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATGTGGTTTTAATAAAATACACGAAAAACAACTATTTTAGGCAG  400

seq1  CACCAAAATTAAATCACATTTATTTATATCTTCATTCAGGGATGTTTTCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAAATTAAATCACATTTATTTATATCTTCATTCAGGGATGTTTTCT  450

seq1  AGAATGTTCTCTACAAACATACTAGAATTGTGCCTAAACAAAATCACAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTTCTCTACAAACATACTAGAATTGTGCCTAAACAAAATCACAAA  500

seq1  TTTAACAGAAAAAAAAGGGGGGGGGATTGTTCTAGGAATCACAATACCTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAGAAAAAAAAGGGGGGGGGATTGTTCTAGGAATCACAATACCTA  550

seq1  ACAAAATTTTATTTTGTTTTAATTATTTCCTATAAAGTAACATAGCATAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTTTATTTTGTTTTAATTATTTCCTATAAAGTAACATAGCATAA  600

seq1  ACAGCTACTTTTAATATCCAAATAGGTTCAAGGTATTGGATTATTGTTGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTACTTTTAATATCCAAATAGGTTCAAGGTATTGGATTATTGTTGC  650

seq1  TATTTATAATGTAAGAAAGCAATTTTTTTAATATTTGCATCTTCCTTAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATAATGTAAGAAAGCAATTTTTTTAATATTTGCATCTTCCTTAAA  700

seq1  AAAAGAGAAAATGAACTCTATAGAATGCCCACTTAAAGAGTAATTTGTTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAAAATGAACTCTATAGAATGCCCACTTAAAGAGTAATTTGTTA  750

seq1  ATGCACATGAATTC  760
      ||||||||||||||
seq2  ATGCACATGAATTC  764