MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-099D19
Chromosome	1 (Build37)
Map Location	103,481,056 - 103,482,210
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100041909, LOC100040993, LOC383650
Downstream gene	LOC100041056
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041909 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs

name	LOC100040993 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040993
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC383650 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383650
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins pseudo : _no_value

name	LOC100041056 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041056
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100041909 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234239 GeneID:100041909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs product : hypothetical protein LOC100041909 transcript_id : XM_001477928.1

name	LOC100041909 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234240 GeneID:100041909
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477978.1

name	LOC100040993 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040993
definition	number : 1 pseudo : _no_value

name	LOC383650 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383650
definition	number : 1 pseudo : _no_value

name	LOC100041056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041056
definition	number : 1 pseudo : _no_value

name	LOC100041056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041056
definition	number : 2 pseudo : _no_value

name	LOC100041056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041056
definition	number : 3 pseudo : _no_value

name	LOC100041056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041056
definition	number : 4 pseudo : _no_value

name	LOC100041056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041056
definition	number : 5 pseudo : _no_value

name	LOC100041056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041056
definition	number : 6 pseudo : _no_value

name	LOC100041056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041056
definition	number : 7 pseudo : _no_value

name	LOC100041056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041056
definition	number : 8 pseudo : _no_value

name	LOC100041056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041056
definition	number : 9 pseudo : _no_value

name	LOC100041056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041056
definition	number : 10 pseudo : _no_value

name	LOC100041056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041056
definition	number : 11 pseudo : _no_value

name	LOC100041056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041056
definition	number : 12 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:225301
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:158838
definition	standard_name : 15.MMHAP85FLE3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:162928
definition	standard_name : RH126220

name	(CDS detail)
type	STS
link
xref	UniSTS:128471
definition	standard_name : D1Mit136

name	(CDS detail)
type	STS
link
xref	UniSTS:128944
definition	standard_name : D1Mit86

clone name	MSMg01-437F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300C08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-093H02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-179D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398C22
singlet/doublet	doublet
plural/unique	plural

clone name	B6Ng01-186N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256F11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-099D19.b	B6Ng01-099D19.g
ACC	DH909086	DH909087
length	1,250	1,152
definition	DH909086\|Mus musculus domesticus DNA, BAC clone: B6Ng01-099D19, 5' end.	DH909087\|Mus musculus domesticus DNA, BAC clone: B6Ng01-099D19, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcattggcacaagagacaacttcctgaagagaacaccacacctaca gctcagtcacaaagtcaacaattagtaggcaggacatcatgaacttgaaa agcttctgcaaggcaaaaggcacttttaatagggacaaaaagtttacaga atgggaaaatatgattccaaattctacatctgactgagtgctaattttca aaacatagaaagaattcaagaaactaaacatcaacaaatttaataatcca attcaaaatggggcacatatctaaacaaagatttctcaacacaaacatgt caaatggccaagaaacatttgaagtaatgttcaacatcattagccatcag gaaattataaatcaaacaactctgagattccattttatatatgacagact ggctaagagtaatggaaatattttccccttgctggtgggagtacaaactt gtaaagccacttcggaaatcaataatgcagcttcttataaaattaggaat ttatatacttcaagactcaactataccacttctgggtatatataaaaaga tgctccattctaccacaaagacacttgcataaatatgtttatagcaggtt tattaatagtagttagaagctgaaaataacatagaggaaccgataaacaa aaattttaaaaaaatggatagataaataaaaaagtaatgtcatagagtct ttttccatctattgatggaaacagatgtagagatccacaagcaaatatta ggcagagtgagaggaatcctcctgaaaatgggtagaaagattgcagtagc cagagggctgaaggacacaacaataaaacatacagaggggcttagggagg aactacttgacttggttaggttttgctgagaaaccagttctccccacctc ctaatctcacaccacagcatgtgtcttccattccataatctctctttaag tttaaaagtgagtacatatcccatgctggtgccatctgaagtagtaattt gttcatctgctctaactgctgatggttgcatgcaagcttctcttcactgc aaaattctctgatgtaaaggaaaatatacacacatgctgactattttaat atacatagcagctgatgttgtacattttaaaccttcctgcagtaccactc tcttcgatatttctgaatatcctaccagctggaatcactctggctcactc caaccgattttggagattgagcccacacgtgaggcgctcaccatttcgca	gaattcatgttcttctagaaagagcaattctaaacttcatatggaaaaac aaagaaaccaggatattgaaagcaattctcaacaataaaagaacttctga aggattcaccatccatgatctcaagctgtactaatgatcagtagtgataa aaactgcatggtattagcaaagagatagaaaagtcgaccagtggaaaaga attgaagatacagatataagctcacacatatatggacaactaatctttga caaagaagccaataatttttgggaggattcttgatatatgttatttgcaa catagttagaagacacttcaaatttcatgggcagagctagatagttccat ccatgtactccatctcttgtagcaagaaaacagagttcaattaccagaat ggacagaaaagagcagaacataatggaatgcaactgctatcccagtgctg aggagagagtgatggcgtatctctagagctcaatagccagccaatccagc ataagagcaagtcacagctttaagccagagatcccatctcataacacaaa tgatcaatgcccaaggaaagaaccccaaactgacctctggcttctattca tagtcaatgttttccaaaccctggctgcactttgcccttcctaaatgtgg tccataaagatctaaaagtggggtataaggtcaagagaccacagagaaat ttggtctaatctcgttgcagaatagccacaatccctgactggtcttatat tcatgtaaattaggcatgccatttcacaaaagatgaaaggagccccagtg tgatttgcacttgaagattttctcagaatgttagaagtatttcactactg gcatgaaaggcagatgagttttcaaactggcaaagtctcaaggatttggg aaatttaagctgaaaatgatccagataaattgctactttccataagagca agctgctggtctcctcagcagtaggtttagtgatggactctgtgattaag taatgataggaattgtgtctggatttttactaggaatcagaagaaaatat ggtacttattttccacagctcctaggggtctctctgcccactgctcagat taaaaataattatcagcttcaatacccagccagacgaagaacaaaacaca cc
quality values	Open. Hide. 61 47 55 38 61 38 24 61 61 61 47 55 55 61 49 61 61 61 61 59 59 61 61 61 61 61 30 33 28 32 30 26 24 30 37 59 55 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 35 35 55 61 59 61 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 44 55 59 61 61 61 61 61 61 59 55 55 61 61 55 55 61 61 61 61 61 59 55 55 59 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 59 59 59 44 59 59 61 61 61 59 61 61 61 61 61 59 55 55 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 53 53 47 19 47 53 61 61 53 61 47 47 47 53 50 52 61 53 61 61 50 61 61 61 61 61 57 57 53 57 53 57 57 53 47 57 57 57 53 57 57 57 57 53 53 53 43 57 52 57 53 53 53 53 57 57 57 53 57 53 53 47 47 57 57 57 53 53 53 53 57 57 57 53 53 53 53 53 53 53 57 53 57 53 53 57 47 16 47 47 57 50 37 57 47 47 43 53 57 57 53 45 57 57 53 53 57 57 57 57 57 57 43 57 57 47 30 53 57 52 50 53 57 44 53 52 57 43 57 57 57 43 45 42 41 53 57 50 42 40 53 53 52 57 53 50 50 50 57 57 38 33 30 47 28 50 50 48 53 52 37 57 39 47 57 46 35 46 37 47 32 42 53 42 57 32 53 44 53 42 37 31 37 37 32 38 40 40 37 53 45 52 52 40 42 47 35 36 19 34 24 44 34 53 35 34 48 48 29 37 38 47 35 40 30 37 43 47 37 41 44 41 44 57 57 28 33 47 46 43 34 44 37 53 57 33 32 29 14 44 41 27 30 38 32 43 30 47 37 28 32 48 17 42 44 27 40 33 46 38 25 48 34 25 29 47 44 28 31 30 29 39 31 48 47 29 29 27 36 33 41 33 29 41 23 46 46 39 27 29 29 19 12 33 20 36 19 29 29 29 24 28 28 27 29 26 29 29 28 31 27 29 38 33 28 26 27 24 19 51 51 35 31 31 29 21 31 22 46 51 29 21 25 28 28 33 35 29 28 34 29 32 29 27 26 23 33 31 35 28 29 31 28 28 29 28 34 28 14 15 34 23 26 29 31 25 34 28 43 20 43 28 28 24 21 14 23 17 20 20 12 31 26 10 8 32 24 34 28 24 25 28 22 51 20 17 25 29 29 44 36 12 51 41 39 28 28 34 36 23 25 17 7 14 11 28 25 28 31 15 17 23 35 25 19 22 11 6 5 19 25 16 28 22 28 26 20 28 31 17 20 24 20 33 18 22 38 16 10 7 17 34 26 22 22 23 32 20 28 23 26 38 34 25 22 17 16 9 21 31 16 21 23 6 13 25 20 14 22 30 28 21 29 22 24 22 8 18 19 17 14 29 15 6 20 11 17 21 13 33 36 9 12 9 8 7 15 9 6 5 5 6 7 27 30 13 14 10 22 42 42 25 4 5 7 5 7 4 4 11 10 21 15 23 23 15 17 22 11 26 9 6 26 18 27 13 15 7 11 11 6 25 10 12 9 14 23 10 14 23 15 12 22 3 5 4 4 8 9 6 14 4 5 8 6 2 3 22 7 8 16 4 3 5 13 4 5 4 5 3 18 14 6 6 5 5 4 7 6 9 2 3 2 1 4 3 8 3 3 4 18 10 16 18 12 5 5 9 4 5 18 6 7 5 4 1 2 3 8 10 5 4 18 3 5 5 3 6 4 5 9 13 6 9 13 8 4 19 13 1 13 14 13 4 8 4 9 9 6 20 12 5 6 20 4 4 8 4 17 3 4 7 4 6 4 4 7 3 6 10 11 6 7 15 3 4 4 9 7 4 5 15 13 1 2 1 4 2	Open. Hide. 61 47 55 49 52 18 13 14 25 20 25 27 29 25 55 59 59 52 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 59 52 52 37 30 37 44 44 59 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 55 55 61 59 59 59 55 59 61 61 61 61 61 61 61 59 61 59 52 59 59 59 59 61 59 59 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 59 59 61 59 61 59 52 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 50 61 61 50 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 53 61 53 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 53 53 52 61 50 50 61 61 61 61 61 61 53 61 61 50 50 61 61 61 61 53 53 47 50 61 61 61 61 61 53 47 61 61 53 61 61 53 61 61 61 61 47 61 53 61 61 57 52 57 47 47 52 52 57 47 47 57 53 53 52 47 47 47 52 50 52 57 53 53 57 47 47 57 53 53 53 46 47 57 57 53 52 53 53 36 57 53 53 53 57 57 57 37 47 53 53 57 43 57 53 39 47 47 34 52 53 53 47 53 47 53 52 53 57 53 53 45 53 53 53 53 53 47 47 47 38 52 47 43 42 50 57 53 47 57 45 57 47 28 53 52 42 50 41 57 47 45 52 43 45 41 57 57 57 52 48 42 57 57 57 57 30 43 42 52 40 33 47 26 50 38 53 53 57 41 31 34 47 42 52 47 34 37 29 57 57 24 37 57 41 57 53 42 50 50 39 47 50 50 52 36 50 50 30 37 50 35 27 57 53 38 52 27 53 53 31 53 31 57 38 37 52 53 38 53 38 38 21 57 57 25 53 40 27 40 31 37 38 12 33 35 31 57 31 32 57 53 40 40 37 18 37 27 24 32 35 19 27 30 32 57 22 34 32 48 33 57 57 53 18 44 26 30 31 57 17 17 53 40 29 33 41 30 44 24 30 27 46 24 35 31 24 45 44 30 26 28 29 32 44 30 38 48 35 31 11 51 51 41 36 34 30 32 11 30 47 25 41 13 32 30 25 47 29 29 35 17 18 45 51 29 21 29 28 31 39 20 31 47 29 26 34 28 20 46 31 20 45 23 39 29 34 10 29 38 14 44 46 51 25 34 23 51 27 25 25 34 29 20 30 51 38 30 29 21 14 14 29 9 31 33 26 13 46 36 32 51 29 29 51 29 28 51 35 16 29 17 28 27 26 36 46 41 26 27 38 22 22 18 16 11 10 43 16 30 46 28 26 28 31 31 31 22 29 34 38 27 10 13 8 21 7 32 31 41 19 28 25 22 31 27 15 28 22 28 27 29 19 19 10 8 5 14 28 9 5 27 22 18 20 21 18 24 14 44 14 28 23 19 34 31 17 22 14 14 16 31 17 7 11 10 21 22 15 32 19 32 23 30 20 29 28 36 34 28 30 24 18 19 29 9 7 11 10 19 32 11 11 23 12 18 20 39 44 39 23 25 33 12 4 4 4 11 15 23 19 14 14 22 39 17 22 39 32 14 17 15 6 11 20 5 4 15 18 8 22 5 7 4 10 8 13 7 3 7 15 21 9 27 14 11 14 7 29 34 29 7 5 4 5 11 12 10 9 22 30 12 7 12 14 14 9 20 21 13 9 29 7 8 14 33 42 37 18 4 3 15 6 10 5 5 14 19 14 22 8 19 14 8 3 9 11 4 5 6 2 3 9 10 5 2 1 2 5 4 7 8 16 21 8 7 13 3 1 4 6 15 9 22 16

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_103481056_103482210
seq2: B6Ng01-099D19.g_69_1220

seq1  GAATTCATGTTCTTCTAGAAAGAGCAATTCTAAACTTCATATGGAAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTTCTTCTAGAAAGAGCAATTCTAAACTTCATATGGAAAAAC  50

seq1  AAAGAAACCAGGATATTGAAAGCAATTCTCAACAATAAAAGAACTTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACCAGGATATTGAAAGCAATTCTCAACAATAAAAGAACTTCTGA  100

seq1  AGGATTCACCATCCATGATCTCAAGCTGTACTAATGATCAGTAGTGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCACCATCCATGATCTCAAGCTGTACTAATGATCAGTAGTGATAA  150

seq1  AAACTGCATGGTATTAGCAAAGAGATAGAAAAGTCGACCAGTGGAAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCATGGTATTAGCAAAGAGATAGAAAAGTCGACCAGTGGAAAAGA  200

seq1  ATTGAAGATACAGATATAAGCTCACACATATATGGACAACTAATCTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGATACAGATATAAGCTCACACATATATGGACAACTAATCTTTGA  250

seq1  CAAAGAAGCCAATAATTTTTGGGAGGATTCTTGATATATGTTATTTGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGCCAATAATTTTTGGGAGGATTCTTGATATATGTTATTTGCAA  300

seq1  CATAGTTAGAAGACACTTCAAATTTCATGGGCAGAGCTAGATAGTTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTAGAAGACACTTCAAATTTCATGGGCAGAGCTAGATAGTTCCAT  350

seq1  CCATGTACTCCATCTCTTGTAGCAAGAAAACAGAGTTCAATTACCAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTACTCCATCTCTTGTAGCAAGAAAACAGAGTTCAATTACCAGAAT  400

seq1  GGACAGAAAAGAGCAGAACATAATGGAATGCAACTGCTATCCCAGTGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAAAAGAGCAGAACATAATGGAATGCAACTGCTATCCCAGTGCTG  450

seq1  AGGAGAGAGTGATGGCGTATCTCTAGAGCTCAATAGCCAGCCAATCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAGTGATGGCGTATCTCTAGAGCTCAATAGCCAGCCAATCCAGC  500

seq1  ATAAGAGCAAGTCACAGCTTTAAGCCAGAGATCCCATCTCATAACACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGCAAGTCACAGCTTTAAGCCAGAGATCCCATCTCATAACACAAA  550

seq1  TGATCAATGCCCAAGGAAAGAACCCCAAACTGACCTCTGGCTTCTATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAATGCCCAAGGAAAGAACCCCAAACTGACCTCTGGCTTCTATTCA  600

seq1  TAGTCAATGTTTTCCAAACCCTGGCTGCACTTTGCCCTTCCTAAATGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAATGTTTTCCAAACCCTGGCTGCACTTTGCCCTTCCTAAATGTGG  650

seq1  TCCATAAAGATCTAAAAGTGGGGTATAAGGTCAAGAGACCACAGAGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAAAGATCTAAAAGTGGGGTATAAGGTCAAGAGACCACAGAGAAAT  700

seq1  TTGGTCTAATCTCGTTGCAGAATAGCCACAATCCCTGACTGGTCTTATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTAATCTCGTTGCAGAATAGCCACAATCCCTGACTGGTCTTATAT  750

seq1  TCATGTAAATTAGGCATGCCATTTCACAAAAGATGAAAGGAGCCCCAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAAATTAGGCATGCCATTTCACAAAAGATGAAAGGAGCCCCAGTG  800

seq1  TGATTTGCACTTGAAGATTTTCTCAGAATGTTAGAAGTATTTCACTACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGCACTTGAAGATTTTCTCAGAATGTTAGAAGTATTTCACTACTG  850

seq1  GCATGAAAGGCAGATGAGTTTTCAAACTGGCAAAGTCTCAAGGATTTGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAAGGCAGATGAGTTTTCAAACTGGCAAAGTCTCAAGGATTTGGG  900

seq1  AAATTTAAGCTGAAAATGATCCAGATAAAATTGCTACTTTCCATTAAGAG  950
      |||||||||||||||||||||||||| |||||||||||||||| ||||||
seq2  AAATTTAAGCTGAAAATGATCCAGAT-AAATTGCTACTTTCCA-TAAGAG  948

seq1  CAAGCTGCTGGTCTCCTCAGCAGTAGGTTTAGTGATGGACTCTGTGATTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGCTGGTCTCCTCAGCAGTAGGTTTAGTGATGGACTCTGTGATTA  998

seq1  AGTAATGATAGGAATGTGT-TCTGGATTTTTTACTAAGGAATCAGAAG-A  1048
      ||||||||||||||| ||| |||||| |||||||| |||||||||||| |
seq2  AGTAATGATAGGAAT-TGTGTCTGGA-TTTTTACT-AGGAATCAGAAGAA  1045

seq1  AATATGGTACTTAATTATTCAACAGC-CCTAGGGGTCTCT---GCCACTG  1094
      |||||||||||||  | ||| ||||| |||||||||||||    ||||||
seq2  AATATGGTACTTA--TTTTCCACAGCTCCTAGGGGTCTCTCTGCCCACTG  1093

seq1  CTCAGATAAAAATAAATTATCAGCTTCAATACACCAGCAGCACGGAAGAA  1144
      ||||||| ||||  |||||||||||||||||| |||||   || ||||||
seq2  CTCAGATTAAAAATAATTATCAGCTTCAATAC-CCAGCCAGAC-GAAGAA  1141

seq1  CAAATCACACC  1155
      |||| ||||||
seq2  CAAAACACACC  1152

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information